Lactococcus lactis AI06: LG36_2081
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Entry
LG36_2081 CDS
T03480
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
llj
Lactococcus lactis AI06
Pathway
llj03030
DNA replication
llj03410
Base excision repair
llj03420
Nucleotide excision repair
llj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG36_2081 (polA)
03410 Base excision repair
LG36_2081 (polA)
03420 Nucleotide excision repair
LG36_2081 (polA)
03440 Homologous recombination
LG36_2081 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llj03032
]
LG36_2081 (polA)
03400 DNA repair and recombination proteins [BR:
llj03400
]
LG36_2081 (polA)
Enzymes [BR:
llj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG36_2081 (polA)
DNA replication proteins [BR:
llj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LG36_2081 (polA)
DNA repair and recombination proteins [BR:
llj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LG36_2081 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG36_2081 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
DUF2120
Motif
Other DBs
NCBI-ProteinID:
AIS04676
LinkDB
All DBs
Position
complement(2250859..2253492)
Genome browser
AA seq
877 aa
AA seq
DB search
MENKNRLLLIDGSSVAFRAFFALYNQIDRFKAPNGLHTNAIFAFHTMLSSLMERIEPTHV
LIAFDAGKTTFRTEMFADYKGGRSKTPDEFREQLPFIKEMIEKLGIRHYELANYEADDII
GTLDKMAEAPNVNFDVTIVTGDKDMIQLVDGNTRVEISKKGVAEFEEYTPDYLLEKMGLT
PAQFIDLKALMGDSSDNYPGVTKVGEKTGLKLLQEFGSLENLYENVDSLKASKMKENLIA
DKEMAFLSQQLATINTKAPIEIGLDDTLLKGKKVDELSQFYDEMGFAQFKSKLLAEAGGE
VTDEKIVDEIDFEIVTDGSISEKVNADDFFYLETLGENYHREQIVAFAWGNAEKIYVSKN
IDLLTKMKFPENTYDFKKNRVLLSHLNIELPLVKFDAMLAKYLISTTEDNKISTIARLFN
SGHLATDEEIFGKGTKIALPDDAVLFEHLARKIKVLAFAKEKMMAELLENEQEHLLSDME
LPLAEVLAKMEITGIAVSQNTLEEIGAENEEKLASLTREIYDLAGEEFNINSPKQLGVIL
FEKLQLPVGKKTKTGYSTAVDVLEDLAALSPVVAKILEYRQINKVQSTYVKGLIPQIADD
GKIHTRYVQDLTQTGRLSSVDPNLQNIPVRLEEGRKIRKAFVPSKDSLLLSSDYSQIELR
VLAHISGDEHLIDAFKHGADIHTSTAMRVFGIEKAEDVTANDRRNAKAVNFGVVYGISDF
GLARNLGITRKDAKSYIETYFERYPGIKTYMENIVREARDKGFVETMSHRRRKIPDINAR
NFNVRGFAERTAINSPIQGSAADILKIAMINLDKALSARDFKSKLLLQVHDEIILDVPLE
ELDEIKALVKQTMEEAIELAVPLKVDENTGKTWYEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagaacagacttttactaattgatgggtcatcggttgcctttcgagccttt
tttgcgctatataatcagatagatcgctttaaagcgccaaatgggttacatactaatgct
atttttgcatttcataccatgctttcttctttgatggaacggattgagcccacacatgtt
ttgattgcatttgatgcaggaaaaacaacttttcgtacggaaatgtttgctgattataaa
ggcggacgttcaaaaacaccagatgaatttcgggagcaattaccttttatcaaggaaatg
attgagaaattgggaattcgtcattatgagttagctaactatgaggctgatgatattatt
gggactttggacaaaatggcggaagccccaaatgttaattttgatgttactattgtgacg
ggtgataaggatatgattcagcttgtggatggaaatacgcgagttgaaatttctaagaag
ggtgttgctgagtttgaggagtatacacctgattatcttttagaaaaaatgggattgact
ccagcccaatttattgatttaaaagcattaatgggcgattcttctgataattatcctggc
gtcacaaaagttggcgaaaaaactggtcttaaacttttacaagagtttgggtcgcttgaa
aatctctatgaaaatgttgattctttgaaagccagcaaaatgaaagaaaatctaattgct
gacaaagaaatggcttttttgtcacaacaattggcaacgataaatacgaaagctccaatt
gaaattggcttagatgatacgcttttaaaaggtaaaaaggttgatgaacttagtcaattt
tatgatgaaatgggatttgctcaattcaaaagtaaattattggctgaggctggtggagaa
gttactgacgaaaaaattgttgacgaaattgattttgaaatagttactgacggctctatc
agtgaaaaggtaaatgctgatgatttcttctatttggaaactttaggggaaaattatcat
cgtgagcaaattgtggcttttgcttggggaaatgctgagaaaatttatgtttctaaaaat
atagatttactgacaaaaatgaaattccctgaaaatacttatgatttcaagaaaaatcgg
gtacttttgagtcacttgaatatcgaattacctttggtcaaatttgatgcaatgcttgca
aaatatctaatttcaacaacagaagataataaaatttcgacgattgcaagacttttcaat
agcggacatttggcaacggatgaagaaatttttggcaaaggtacaaaaattgctttacct
gatgatgcggttttatttgaacatttagctcgtaaaattaaagtgcttgccttcgccaaa
gaaaaaatgatggctgaattgcttgaaaatgaacaagagcatcttttgtctgatatggaa
ttaccattagcagaagttttagcaaaaatggaaattacagggattgctgtcagccaaaat
acactggaagaaattggtgcggaaaatgaagaaaaattggcttctttgacgcgcgagatt
tacgacttggctggtgaagaatttaatattaattcaccaaaacagttgggtgtgatttta
tttgaaaaattacagctaccggttggaaagaaaacaaaaacaggttattcaacggcagtg
gatgttttagaagacttagctgctttatctcccgttgtagcaaaaattttggaatatcgt
caaatcaataaagtacaatcaacttacgtgaaaggtctgattcctcaaattgctgatgat
ggaaaaattcatacacgttatgttcaagatttgactcaaactggacgtttaagctcagtt
gacccgaatttacaaaatattcctgttcgacttgaggagggacgaaaaattcgtaaagct
tttgtcccaagcaaagattcacttttattgagttctgactattcacaaattgaattgcgg
gttttggcacatatttctggagatgaacatttaattgatgcctttaaacatggagctgat
atccatacttcaacggctatgcgtgttttcggcattgaaaaagcagaagatgtgactgct
aatgatcgtagaaatgctaaagcagtcaattttggagtagtctatggaatttccgatttt
ggtttagcaagaaatcttggaattacaagaaaagatgctaaaagttacattgaaacttat
tttgaacgttatcctgggattaaaacctatatggaaaatattgttcgcgaggcacgagat
aaaggttttgttgaaacaatgagtcaccgtcgtcgtaagattccagatattaatgctcgt
aattttaatgttcgtggttttgcagaacggacggctattaactcaccaattcaaggttcg
gcagctgatattttgaaaattgcgatgattaatttggataaagctttgagtgctcgtgat
tttaaatcaaaattattattgcaagtacacgatgaaattatccttgatgttcctttagag
gaattagatgaaattaaggccttggtaaaacaaacgatggaagaagcgattgaacttgct
gtcccattaaaagtggatgaaaatactggtaagacttggtatgaagctaaataa
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