Lutzomyia longipalpis: 129787386
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Entry
129787386 CDS
T10428
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
lll Lutzomyia longipalpis
Pathway
lll03013
Nucleocytoplasmic transport
lll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129787386
09122 Translation
03013 Nucleocytoplasmic transport
129787386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lll03019
]
129787386
03041 Spliceosome [BR:
lll03041
]
129787386
Messenger RNA biogenesis [BR:
lll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129787386
Spliceosome [BR:
lll03041
]
Complex C
Other components
EJC/TREX
129787386
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129787386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
TMEM215
DUF2714
Thioredoxin_11
Motif
Other DBs
NCBI-GeneID:
129787386
NCBI-ProteinID:
XP_055678899
LinkDB
All DBs
Position
1:complement(41664866..41683501)
Genome browser
AA seq
1448 aa
AA seq
DB search
MGPRGPRFPDFPELSTRSQPVRCHPAAGVHAASGAPLNPFSLFFGLSISSLRQCKKALKD
SQSPLFTKSDRKASISHAVYELLAHGVRGHLRKDSVLSALSDLAYLHSDMPSIILDVIGV
LDAETSANAGDSAMEERQVFCHIVKGTEKFLSEKLLKERLEIDTLQEVGTVKNRNFYTKF
IKVKTKLYYKQRRFNLFREESEGYAKLITELNKEISETVTVQSMLEIIKSLIGCFNSDPN
RVLDIILESFETRPDQDKLFIPLLQAYMPDGQIICEVLGYKYSHYADIGTPESLYKVTAI
LLQNSVISLDEIYSWLSPSDKTIIADWETEMTNAKEFVRKLNIVSTNKDKEPENEPEKDV
PQDKFTNNQKFGLCEALLGVGDWITAQQLIKKLPDQCTIVHEPIARALCKLIHSIIEPVY
AAKCSKAYIKRKQVPPNPNRLAPPQVTSFHKLRVHAFPMFIALGPSLYYDPVLLYKLIRL
MKAILQDAGVDAAQPPPAGSDAELLYHDILSLMDAAVLPALSYLDCNCCVAEEIWTVLKF
FPYQYRFSLYARWKNETYLTQPKMIQKRGAAQKQIKALMKRVSKENVKPVGRLIGKLSHC
SPGFLFDYILLQIQIYDNLIGPVVDSLKYLTSLSYDVLGYCLVEALAQADRDRFKHDGTS
LSMWLQSLASFCGAIYKKYNIELSGLLQYVANQLKAHKSLDLLILKEVVQKMAGIEAAEE
MTNDQLSAMCGGEQLRGEAGYFSQVRNTKKSSQRLKDALASNDLSVALCLLMAQQKHCVI
YRETAHSHLKLVGKLYDQCQDTLVQFGTFLGSTYTVEEYMERLPSIHSMLQEYHIHSDVA
FFLARPMFSHQINQKYDQLRKADPNTKKLTTTQKLSKYLEATASVMVPIVESVRPLHPPK
VWEDVSPQFLVTFWSLSMYDLQVPAESYQKEIAKLKLLASQVMESKEMNASKGKKEQERY
LALIDKLQDERKKQQEHVDKTLHRLSQEKDSWFLSRSVKSAKNETITQFLQLCLFPRCTF
TALDAIFCAKFVHTIHSLKTANFSTLLCYDRIFCDITNSVTSCTENEATRYGRFLCAMLE
TVMRWHADQAVFNKECANFPGFVTKFRVSNQFSEANDHVGYENYRHVCHKWHYKITKAMV
FCLDSKDYMQIRNSLIILMKILPHFPVLTKLSQIIEKKVEKVKDEEKNQRQDLYILAASY
IGQLKAKASQMIRESDFHQVADKPAKEASTTEKVVNGDSKAEKKEAKERTEKSSSKSSGT
LKSSTNASTPAPVVEKVEKEATPTATAAAAASAAATPKKESTREGSNRTTQAKEKTPKEI
RREERQREKREEGKSRKRDKEKRRERKAASPSSYYDAPVERYYPVEHYDHERERDRDRDL
SSVSNSSNGSTHRRSQEPPEQESRGRRAAEFSGASPDDEYFHVTDSKRRKMDVSSRVSIV
EHSKRSWR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggggccacgcgggccacgcttcccggacttccctgaactctccacccggtcgcagcct
gtccgttgtcacccggcggctggcgtccacgcggcaagtggcgcgcccctgaatccattt
tctcttttttttggtctctctatttccagcttgaggcaatgcaagaaggcattgaaagat
agccagagtcctctctttaccaaatccgaccgcaaggcaagcatctcccacgctgtctac
gagctcctggcccatggagtccgcggtcacctccgcaaggactctgtcctttcagccctt
agcgatttggcctacctccactcggacatgccatcgattatcctggatgtgattggggtg
ttggatgcagagacgagcgccaatgcgggggattcagcgatggaggagcgtcaggtgttc
tgccacatcgtcaaggggacggagaaattcctctcggagaagctgctgaaggaacgtctg
gagattgacacactgcaggaagtgggaacagtcaagaacaggaatttctacacaaaattc
atcaaagttaaaacaaagttgtactacaaacagcgtcgcttcaatttattccgcgaagag
agtgagggctatgcaaaattgattacagaactcaataaagaaatctccgagactgtaaca
gtgcagagtatgttggagatcataaaatccctcattgggtgcttcaattcggacccaaat
cgcgttcttgacatcattttggagtcatttgagacgcgtccggatcaggataagctcttc
atacccctcctgcaggcttacatgcccgatggacagataatctgcgaggtattgggctac
aaatacagccactatgcggacattgggaccccggagtctctgtacaaagtcacggcgatt
cttctgcagaacagcgtgatttctctcgatgaaatttattcatggctaagcccgtcggat
aagacaatcatagcggattgggagacagagatgacgaatgccaaagaattcgtacgaaaa
ctcaacattgtgtccacaaataaggacaaggagcccgagaatgagcctgaaaaggatgtg
cctcaagataaatttacaaataaccaaaagtttggtctctgtgaggctcttctgggcgtt
ggggattggataacggcccagcagctcatcaagaagctcccggatcaatgcacgattgta
cacgaacccattgcaagggctctctgtaagctcattcacagcataattgagcctgtttat
gcggcaaaatgttccaaggcgtacattaagcggaagcaagtgcccccaaatccgaatcgt
ttagccccaccgcaagtaacgtccttccacaaattgcgtgttcatgcattccccatgttt
atagctctcggcccatcactctactacgatcctgtgttgctgtacaaactcatacgcctc
atgaaggcaatcttgcaggatgcaggagttgatgcggcacaaccaccaccggctgggagt
gatgcagaacttctctatcatgatattctttcgctcatggatgccgccgtactgccggca
ctttcctacctcgattgcaattgttgcgtagcagaggagatttggacagtgctgaagttc
tttccgtaccagtatcgctttagtctctatgcacggtggaagaatgagacgtatttgaca
cagccgaagatgattcagaagcgtggagcggctcagaagcaaattaaggcgctcatgaag
cgcgtgagtaaggagaatgttaagcctgttggacgtctcattgggaagttgagtcactgt
tcaccgggattcctctttgattatatcctcctgcagattcaaatctatgacaatctcatt
ggtcccgttgtggattcactgaagtatctcacatccctgtcatacgacgttttgggctat
tgccttgttgaggcactggcgcaagcagatagggatcgttttaagcacgacgggacatcg
ctgtcaatgtggctgcagagcttggcgagtttctgcggtgccatctacaagaagtacaac
attgagctaagtgggctactgcagtacgtggcgaatcagctgaaggcacacaagagtctc
gatctgctgatcctcaaggaggtcgtgcagaaaatggcgggaattgaggcagcggaggag
atgacaaatgatcaattgagtgccatgtgcggtggggaacagctgcgtggggaagcgggt
tactttagccaagttcgcaatacgaaaaagtcctcccagcgcttgaaggatgctctggcc
agcaatgatttgtctgtggcgctgtgcctgctaatggcgcaacagaagcactgcgtgatc
tatcgcgagacggcgcatagtcatttgaaactcgttgggaagctctatgatcagtgtcag
gacactctcgtgcagtttggcaccttcctcgggtccacctacaccgttgaggagtacatg
gagcgtctcccgtcgatccacagcatgctccaggagtaccacattcactctgacgttgca
ttcttcctcgcacgtccgatgttttcgcatcagatcaatcaaaagtacgatcaattgcgg
aaagctgatccgaatacgaagaaactcacgacaacgcagaaattgagtaaatatctcgag
gctacggcgtccgtgatggtacctattgtggagtctgtgcgtccattgcatccgcccaag
gtgtgggaagatgttagtccgcaattcctcgtgaccttctggtcgctcagtatgtatgat
ttgcaagtaccagcggagagttatcagaaggagattgcaaagctcaaattgttggcgagt
caagtgatggagtccaaggagatgaatgcttcgaagggtaagaaggagcaagagaggtat
ttggcattgattgacaaactccaggatgagcggaagaagcaacaggaacatgtggataag
acattgcatcggttgtcacaggaaaaggattcgtggttcctgtcgaggagtgttaaatca
gcaaagaatgagacaataacgcaatttttgcaactctgcctctttccacggtgcacgttt
acggccctcgatgcaattttctgtgcaaaattcgtccataccattcatagcctcaaaact
gccaacttttccacgcttctctgctacgatcgaatcttctgtgacatcacaaactctgtg
acatcgtgcacggagaatgaggcaacacgctatgggagatttttgtgcgcaatgcttgag
acggtgatgcgttggcatgccgatcaggcggtttttaacaaggaatgcgccaattttccg
ggttttgttacaaaattccgcgttagtaatcaattttccgaggcaaatgatcacgttgga
tatgagaattatcggcatgtttgccacaaatggcattacaaaattaccaaagccatggtt
ttctgccttgactcaaaggactacatgcaaatacggaattccttgataattctcatgaaa
atcctcccgcatttccctgttttgacaaaattgtctcaaataattgagaagaaagtggaa
aaggtgaaggatgaggagaagaatcaacggcaggatttgtatattctcgctgcgagctac
attgggcaactcaaggcgaaggcaagtcagatgatacgtgaaagtgatttccatcaagtt
gccgataagccggcaaaggaggcgtcaacaacggagaaagtcgtcaatggagactcaaag
gctgagaaaaaggaggcaaaagagcgtacggagaagagtagtagtaagtcatcggggaca
ctgaagtcatccacgaatgcaagtacaccagcaccggtggtggagaaggtggagaaggaa
gcaacacccacggctacagcggcggctgcggcgtctgctgcggcaacacccaagaaggaa
tcaacgcgagaagggtcaaataggacgactcaggcgaaggagaagaccccgaaggagatt
cgtcgtgaggagaggcagcgtgagaagcgtgaggaggggaagagccggaagagggacaag
gagaagcgaagggaacgcaaagcagcatcaccatcatcgtactacgatgcccccgtggag
cgatactacccggttgagcactacgatcacgagcgggagcgcgatcgtgatcgtgatctg
agctccgtgtcgaattcgagcaatggatcgacgcacagacgcagccaggagccgcctgag
caagagagtagaggtaggagggcagctgagttttcgggtgcatcgccagatgatgagtat
tttcacgttacagactccaagaggcgcaaaatggatgttagctcccgggttagtattgtg
gagcactcaaagcgatcttggcgatga
DBGET
integrated database retrieval system
