Lutzomyia longipalpis: 129787856
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Entry
129787856 CDS
T10428
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lll Lutzomyia longipalpis
Pathway
lll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129787856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lll03019
]
129787856
Messenger RNA biogenesis [BR:
lll03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129787856
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Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
129787856
NCBI-ProteinID:
XP_055679646
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Position
1:46236514..46239098
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AA seq
785 aa
AA seq
DB search
MSQKEAADESDSSGVEEVPEDDEKEPQSESIEELTKDGLGKIISATKASLALPAGASRDL
YCAQPSFIRIVNGESDKILDIVGKILKHQNIRGNIQRRDDDERMDLVLECNDSMLERINS
NLDEMAGLKKAPEMVLAEVALSPQEKRRHSSGRNSMGEAKLLTAKNILRPQVNFRVPVDN
RNSTPFEPRIKYKPNSLKPLAILAEYGDDGMIESYLHPYEVELGRFEVPEEQLGKVAPKK
PPKDVEETPLVFIDSPEKLPEVVQELGKVKEIAVDLEHHSYRSFQGFTCLMQLSTRDKDY
ILDTLTLREDLHVLNEVFTNPGIVKVFHGADCDIEWLQKDLSLYVVNMFDTHQAARKLSF
ARASLAYLLKHYCHIEADKTFQLADWRIRPLPEELVAYARRDTHYLLYVYDMLRNELLRK
ANYQPNWLRSVYQQSTEICRKRYVKPRLTLDSHMELYRKSKKNFDNRQLFAFREIFNWRD
GIAREEDESCAYVLPNHMLFHIAEVLPREMQGILACCNPVPPLVRQHLLHIHKIILKARE
QPLEKVILAEEAPRMAPGTTIDINSFLYCPHDLPREIQDNLPTLLDTVEPPNVPALPDMR
KLHAKVSIFEEKHPKKNLPKIPFVSPYQRYRAVIPIAEEERRKAQQLEEAQKQKRRLCPE
ASEVLPEIVASPEIKTESGKRKSEGSGGEPAGKIPRKEAHREAPEPPAASTSPETPKMSR
NKRKKLKKMQQEAKLAEFDYTSVDFSKFQGGSRPEKTERHDYASKFRSRGQKARNADKRL
NKIFR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaaggaagctgcggatgagtctgatagttcaggagtggaagaagtgcctgaa
gatgatgagaaagagcctcaaagtgaatcaattgaggagctgacaaaagacggccttgga
aagattattagcgccacaaaggcttccttggcacttcctgcgggtgcttcgagggatctc
tattgtgcccaaccgtcgtttattcgcatcgtcaatggggaatctgataaaattctcgac
attgttgggaagattctcaagcatcagaacatccgggggaatatccaacgaagggatgat
gatgagcggatggatttggtgctggagtgcaatgactcaatgctcgagaggataaattcg
aatttggatgaaatggcggggttgaagaaggctccggagatggttcttgctgaagtggct
ctgagtccgcaagagaagaggcgacattcaagtgggaggaacagtatgggggaggcaaag
ttgctgacggcaaagaacatcctgcggcctcaggtgaacttccgggttccggtggataat
cgcaatagcaccccatttgagccgaggatcaaatacaagccgaacagtttgaaacctctg
gccattctggcggaatatggggatgatgggatgattgagtcgtacctgcatccgtatgag
gtggaattgggtcgatttgaagttccggaagagcaattggggaaggttgcgccgaagaag
ccgccaaaggatgtggaagaaactccccttgtgttcattgacagccctgagaagcttccg
gaagtggtgcaggagttggggaaagtcaaggagattgctgttgatcttgaacatcattcc
tatcgcagcttccagggcttcacatgtctcatgcagctgtcaacgcgtgacaaggattat
attctggacacattgaccttgagggaggatctgcatgtgctcaatgaagttttcacgaat
cctggcattgtgaaggttttccacggggcggattgtgacattgagtggctacagaaggat
ctctcgctgtatgtggtgaatatgtttgatacgcatcaagctgcgaggaagctgagcttt
gccagggcttccctggcctacctcctcaagcactactgccacattgaggcggacaagacg
ttccagctggcagattggcgaatccggccacttccggaagaactcgtggcctacgcgcgg
cgggacacacactaccttctctacgtgtacgatatgctgcggaatgagcttctccggaag
gccaactaccagccaaattggctccggagtgtctatcagcagagcacggagatctgccgg
aagcgctacgtgaagccacgactcacgcttgattcccacatggagctgtacaggaagtcc
aagaagaactttgacaatcgtcagctttttgccttccgggagatcttcaattggcgcgat
gggattgcccgggaggaggatgagagttgtgcctacgtcctgcccaatcacatgctcttc
cacattgctgaagtcctcccgcgtgagatgcagggaatcctggcatgctgcaaccctgtg
ccaccgctggtgcgtcagcatctcctgcacattcacaaaataatcctcaaggcacgtgaa
cagcccctggagaaggttattctagctgaggaggcaccacgaatggctcccggaactacc
attgatatcaatagcttcctgtactgtccacatgatctcccacgcgaaattcaggacaat
cttcccacacttcttgacacggtggaacccccgaacgtcccagcacttccggacatgcgg
aagcttcatgcaaaagtctcaattttcgaggagaagcatcccaagaagaatctcccaaag
attccctttgttagcccatatcagcggtaccgagctgtgatacccattgcagaggaggag
aggcgcaaagcgcagcaattggaggaggcacagaagcagaaacgaagactctgtccagaa
gcttcggaagttcttccggaaattgtggcttcgcctgaaattaaaactgaatccgggaaa
cgcaaatccgaggggagtgggggtgagccagctggtaaaattccccgtaaggaggcacat
agagaggcgccagagcccccggcagcgtccaccagtccggaaacacccaaaatgagcagg
aataagcggaaaaaactgaaaaagatgcagcaggaagcaaaattagcggaatttgactat
acttcggtggattttagcaaattccaaggaggatcacgtccggagaagacagagaggcac
gactatgcctcaaagttccgtagtcgtgggcagaaggccaggaatgccgataagcgtctc
aataaaatctttcgttga
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