KEGG   Lutzomyia longipalpis: 129787856
Entry
129787856         CDS       T10428                                 
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lll  Lutzomyia longipalpis
Pathway
lll03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lll00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129787856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lll03019]
    129787856
Messenger RNA biogenesis [BR:lll03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     129787856
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 129787856
NCBI-ProteinID: XP_055679646
LinkDB
Position
1:46236514..46239098
AA seq 785 aa
MSQKEAADESDSSGVEEVPEDDEKEPQSESIEELTKDGLGKIISATKASLALPAGASRDL
YCAQPSFIRIVNGESDKILDIVGKILKHQNIRGNIQRRDDDERMDLVLECNDSMLERINS
NLDEMAGLKKAPEMVLAEVALSPQEKRRHSSGRNSMGEAKLLTAKNILRPQVNFRVPVDN
RNSTPFEPRIKYKPNSLKPLAILAEYGDDGMIESYLHPYEVELGRFEVPEEQLGKVAPKK
PPKDVEETPLVFIDSPEKLPEVVQELGKVKEIAVDLEHHSYRSFQGFTCLMQLSTRDKDY
ILDTLTLREDLHVLNEVFTNPGIVKVFHGADCDIEWLQKDLSLYVVNMFDTHQAARKLSF
ARASLAYLLKHYCHIEADKTFQLADWRIRPLPEELVAYARRDTHYLLYVYDMLRNELLRK
ANYQPNWLRSVYQQSTEICRKRYVKPRLTLDSHMELYRKSKKNFDNRQLFAFREIFNWRD
GIAREEDESCAYVLPNHMLFHIAEVLPREMQGILACCNPVPPLVRQHLLHIHKIILKARE
QPLEKVILAEEAPRMAPGTTIDINSFLYCPHDLPREIQDNLPTLLDTVEPPNVPALPDMR
KLHAKVSIFEEKHPKKNLPKIPFVSPYQRYRAVIPIAEEERRKAQQLEEAQKQKRRLCPE
ASEVLPEIVASPEIKTESGKRKSEGSGGEPAGKIPRKEAHREAPEPPAASTSPETPKMSR
NKRKKLKKMQQEAKLAEFDYTSVDFSKFQGGSRPEKTERHDYASKFRSRGQKARNADKRL
NKIFR
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgtcccagaaggaagctgcggatgagtctgatagttcaggagtggaagaagtgcctgaa
gatgatgagaaagagcctcaaagtgaatcaattgaggagctgacaaaagacggccttgga
aagattattagcgccacaaaggcttccttggcacttcctgcgggtgcttcgagggatctc
tattgtgcccaaccgtcgtttattcgcatcgtcaatggggaatctgataaaattctcgac
attgttgggaagattctcaagcatcagaacatccgggggaatatccaacgaagggatgat
gatgagcggatggatttggtgctggagtgcaatgactcaatgctcgagaggataaattcg
aatttggatgaaatggcggggttgaagaaggctccggagatggttcttgctgaagtggct
ctgagtccgcaagagaagaggcgacattcaagtgggaggaacagtatgggggaggcaaag
ttgctgacggcaaagaacatcctgcggcctcaggtgaacttccgggttccggtggataat
cgcaatagcaccccatttgagccgaggatcaaatacaagccgaacagtttgaaacctctg
gccattctggcggaatatggggatgatgggatgattgagtcgtacctgcatccgtatgag
gtggaattgggtcgatttgaagttccggaagagcaattggggaaggttgcgccgaagaag
ccgccaaaggatgtggaagaaactccccttgtgttcattgacagccctgagaagcttccg
gaagtggtgcaggagttggggaaagtcaaggagattgctgttgatcttgaacatcattcc
tatcgcagcttccagggcttcacatgtctcatgcagctgtcaacgcgtgacaaggattat
attctggacacattgaccttgagggaggatctgcatgtgctcaatgaagttttcacgaat
cctggcattgtgaaggttttccacggggcggattgtgacattgagtggctacagaaggat
ctctcgctgtatgtggtgaatatgtttgatacgcatcaagctgcgaggaagctgagcttt
gccagggcttccctggcctacctcctcaagcactactgccacattgaggcggacaagacg
ttccagctggcagattggcgaatccggccacttccggaagaactcgtggcctacgcgcgg
cgggacacacactaccttctctacgtgtacgatatgctgcggaatgagcttctccggaag
gccaactaccagccaaattggctccggagtgtctatcagcagagcacggagatctgccgg
aagcgctacgtgaagccacgactcacgcttgattcccacatggagctgtacaggaagtcc
aagaagaactttgacaatcgtcagctttttgccttccgggagatcttcaattggcgcgat
gggattgcccgggaggaggatgagagttgtgcctacgtcctgcccaatcacatgctcttc
cacattgctgaagtcctcccgcgtgagatgcagggaatcctggcatgctgcaaccctgtg
ccaccgctggtgcgtcagcatctcctgcacattcacaaaataatcctcaaggcacgtgaa
cagcccctggagaaggttattctagctgaggaggcaccacgaatggctcccggaactacc
attgatatcaatagcttcctgtactgtccacatgatctcccacgcgaaattcaggacaat
cttcccacacttcttgacacggtggaacccccgaacgtcccagcacttccggacatgcgg
aagcttcatgcaaaagtctcaattttcgaggagaagcatcccaagaagaatctcccaaag
attccctttgttagcccatatcagcggtaccgagctgtgatacccattgcagaggaggag
aggcgcaaagcgcagcaattggaggaggcacagaagcagaaacgaagactctgtccagaa
gcttcggaagttcttccggaaattgtggcttcgcctgaaattaaaactgaatccgggaaa
cgcaaatccgaggggagtgggggtgagccagctggtaaaattccccgtaaggaggcacat
agagaggcgccagagcccccggcagcgtccaccagtccggaaacacccaaaatgagcagg
aataagcggaaaaaactgaaaaagatgcagcaggaagcaaaattagcggaatttgactat
acttcggtggattttagcaaattccaaggaggatcacgtccggagaagacagagaggcac
gactatgcctcaaagttccgtagtcgtgggcagaaggccaggaatgccgataagcgtctc
aataaaatctttcgttga

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