Lutzomyia longipalpis: 129790841
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Entry
129790841 CDS
T10428
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lll Lutzomyia longipalpis
Pathway
lll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129790841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lll03041
]
129790841
03009 Ribosome biogenesis [BR:
lll03009
]
129790841
Enzymes [BR:
lll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129790841
Spliceosome [BR:
lll03041
]
Complex A
U1 snRNP components
U1 related factors
129790841
Complex B
129790841
Ribosome biogenesis [BR:
lll03009
]
Eukaryotic type
Pre-60S particles
Helicases
129790841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
P-loop_SecA
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
129790841
NCBI-ProteinID:
XP_055684606
LinkDB
All DBs
Position
1:complement(590952..600834)
Genome browser
AA seq
613 aa
AA seq
DB search
MFRIITRNAFIMYNNSFSRNIASKPVILANLSSRLSTLHTDFIEDNMAPHQRSDRGSFRD
RRSDGGDRRGRGGGGGGDNRRDRDGHVSKPAGKFTMSASMRAPNWDMSSLRPFKRDFYEP
HPMTIKRSQTEVERYREEHQITVVGQAHNPIQSFGEVRFPDYVMNGIRRQGYESPTPIQA
QGWPIALSGSNMVGIAQTGSGKTLGFILPAIVHINNQPPLARGDGPIALVLAPTRELAQQ
IQQVATEFGSASYVRNTCVFGGAPRFGQARDLERGCEIVIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRQILSQIRPDRQVLMWSATWPKEVRRLALDFLGKDYLQVN
IGSLELSANHNIHQIIEFCEEFEKEDKLKQILEQINQHNKPGKVIIFVETKRKVEHITRA
LRYYGLNVFCIHGDKSQNERDYVLREFRKGDCPILVATDVAARGLDVEGINFVINFDYPQ
NSEDYIHRIGRTGRSQSTGTSFALFTKQNCKQAKDLIAVLQEANQEVNPKLMEMARMGGG
GNDGRRWGRSAGGGGARRGGMGGYGGANNGYGAAGRRNDAGQRFGGGAPRQNGMSNGNSG
GGAYGGRTHTRFN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatcatcacccgcaacgcattcatcatgtacaacaattcattttccaggaat
atcgcgtcaaagccagtgatattagcgaatttatcgagtcgtttgtccacgctgcacacg
gatttcattgaagacaatatggcaccacaccagcgttcagatcgaggtagtttccgcgat
aggaggtccgatgggggtgatcgcaggggccgcggtggtggtggcggtggtgacaacaga
cgcgatcgtgatgggcacgtttcgaagcctgctgggaaattcacaatgtccgcatcgatg
agagctccaaattgggacatgtcgagtctgcgccccttcaagcgtgacttctacgagccc
cacccaatgacaattaagcgctcccagacggaagttgagcgctaccgcgaagagcatcag
attaccgttgttggtcaagctcacaatcccatccagagttttggcgaggttcgtttcccg
gactacgtgatgaatggcattcgtcgtcagggctatgagagccccacaccgattcaggca
cagggatggcctattgctctctccggatcaaatatggtgggaattgcacagactggatcg
gggaaaactctcggattcatcctgcctgccattgtgcacattaacaatcaacctccactt
gcccgtggggatggacccattgccctcgtcttggcacccacacgtgagcttgcccagcaa
attcagcaagttgccacggaatttggatctgcatcgtacgtccggaatacgtgcgttttc
ggcggggctccacgctttggtcaggcacgcgaccttgagcgtggctgtgagattgtcatc
gccacacccggacgcttgattgatttcctcgaatccggcaagacgaatctccgtcggtgc
acatacctcgtcctcgatgaggccgaccggatgctcgatatgggttttgagccacaaatc
cggcagatcttgtcgcaaatccgtcccgatcgtcaagttctcatgtggagtgccacgtgg
cccaaggaggtgcgtcgtttggcgcttgatttcctcggcaaggattacctgcaggtgaac
attggctccctggagctctcggctaatcacaacattcaccaaatcatcgaattctgcgag
gaattcgagaaggaggacaaactcaagcaaatcctcgagcagatcaatcaacacaacaaa
cccggaaaggtcatcattttcgtggagacaaaacgcaaagtggagcacattacgcgtgcc
ctacgctactacgggctcaatgttttctgcattcacggggataagtcgcagaatgagcgg
gactacgtgctgagggaattccgcaagggtgattgccctattcttgtggcaacagacgtt
gcagcacgtggattggatgtcgaaggaatcaattttgtcatcaattttgattatccacaa
aattccgaggattacattcatcgtattggaaggacaggaaggagtcaatcaacaggaacg
tcctttgcactgttcacaaaacagaattgcaaacaggctaaagatcttattgctgtactt
caagaggctaatcaggaggtgaatcctaaattgatggagatggcccgcatgggtggcggc
ggcaatgatggtcgtcgctggggccgatccgctggtggcggcggtgcccgacgtggtgga
atgggaggctatggtggtgccaataatggatacggcgcagctgggaggaggaatgatgct
ggacaacgttttggcggtggtgccccgcggcagaatggcatgagtaatggcaacagtggc
ggcggcgcatatggtggacgaacccatacccgattcaattga
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