KEGG   Lutzomyia longipalpis: 129791104
Entry
129791104         CDS       T10428                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
lll  Lutzomyia longipalpis
Pathway
lll03030  DNA replication
lll03410  Base excision repair
lll03420  Nucleotide excision repair
lll03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129791104
   03410 Base excision repair
    129791104
   03420 Nucleotide excision repair
    129791104
   03430 Mismatch repair
    129791104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lll03032]
    129791104
   03036 Chromosome and associated proteins [BR:lll03036]
    129791104
   03400 DNA repair and recombination proteins [BR:lll03400]
    129791104
DNA replication proteins [BR:lll03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129791104
  DNA Replication Termination Factors
   ELG1-RFC complex
    129791104
Chromosome and associated proteins [BR:lll03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129791104
DNA repair and recombination proteins [BR:lll03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129791104
  Check point factors
   HRAD17(Rad24)-RFC complex
    129791104
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 AAA_22 AAA_11 DEAD RuvB_N nSTAND_NTPase5 AAA_assoc_2 ResIII AAA_16 AAA_19 RCF1-5-like_lid AAA_lid_RFC1 AAA_7 AAA_30 DUF815 AAA_5 ATPase_2 NPHP3_N AAA_24 Thioredoxin_6 ABC_tran Mg_chelatase T2SSE DUF4751
Other DBs
NCBI-GeneID: 129791104
NCBI-ProteinID: XP_055685022
LinkDB
Position
2:18173815..18175195
AA seq 331 aa
MVENKKLKTLPWVEKYRPSTLDELISHEEIISTISKFIDEGQLPHLLFYGPPGTGKTTTI
LACIRELYNPGEFNSMVLQLNASDDRGINIVRGQILTFASNRTIFSGGVKLIILDEADAM
TNDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFAPLLPKQILPRLEYVI
QEENVLATEDGKQALITLSGGDMRKVLNVLQSTWMAFKNVTEVNVYSCVGHPQKEDVKNI
MNWLLNAETFEETVDQIKNLKTVKGLALQDIITEVHSYLHRMELPPRVLCLILIKLAEIE
ERLAAGCNENPQLSALVSVFHTARDLVTIEN
NT seq 996 nt   +upstreamnt  +downstreamnt
atggttgaaaataagaaattaaagactttgccatgggtagaaaagtatcgcccttcgaca
ctggatgaacttatatcgcacgaagaaataatctcaacaatcagcaagttcatcgatgag
gggcaactgccacatttgctgttctacggacccccaggaaccgggaagacaaccacaatt
ctcgcctgcatccgcgaactctacaatccgggagagttcaattcgatggttcttcagcta
aatgcttcagatgatcgtggaattaacattgtgcgtgggcaaatcctcacattcgcctcc
aataggacaatattcagcggaggagtaaagctcattatcctggatgaagcggatgcaatg
acgaatgatgcacaaaatgccctccggaggattattgagaagtacaccgacaacgttcgt
ttctgcatcatctgcaactacctaagcaagattattcctgcattgcagtccaggtgcaca
aggttccgctttgcacctcttcttcccaagcaaatcctcccaagattggagtatgttatt
caggaggagaatgtccttgccacggaggatgggaaacaagcactaataaccttgtctgga
ggggatatgaggaaggtcttgaatgtccttcagagtacatggatggccttcaaaaatgtc
acagaagtgaatgtttactcatgcgttggacatccgcagaaggaggatgtgaagaatatc
atgaattggctgttgaatgcagaaaccttcgaggagaccgtggatcaaattaagaatctc
aagactgtcaaaggactagcactgcaggacattataacagaggtccattcctatcttcat
cgcatggaacttcctccgagagttttatgtttgatcctcatcaaattggcagagattgag
gagagattggctgctggatgcaatgagaatcctcagctgtctgctcttgtttctgttttc
catactgcgcgggacttggttaccattgagaattga

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