Lutzomyia longipalpis: 129791284
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Entry
129791284 CDS
T10428
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
lll Lutzomyia longipalpis
Pathway
lll04382
Cornified envelope formation
lll04512
ECM-receptor interaction
lll04518
Integrin signaling
lll04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lll00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129791284
04518 Integrin signaling
129791284
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129791284
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129791284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lll04147
]
129791284
00536 Glycosaminoglycan binding proteins [BR:
lll00536
]
129791284
Exosome [BR:
lll04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129791284
Glycosaminoglycan binding proteins [BR:
lll00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129791284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129791284
NCBI-ProteinID:
XP_055685333
LinkDB
All DBs
Position
2:complement(40480408..40502638)
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AA seq
1800 aa
AA seq
DB search
MWPTPTSPFKGRGKNTQQSSAVFIILVILQIVSSVSAHKRECDCKGLKGTMGQMGTPGLP
GQEGPHGDVGPMGPTGRPGDYGDNGEHGMLGEKGFRGEKGMPGYFGIPGYNGTQGEGGDR
GPRGLDGCNGTEGTMGSPGMPGRPGVRGPPGYDGAPGPRGDAGEGGINSKGTKGDRGDSG
ADGRPGDRGYPGEIGMKGYQGMPGFDGVPGGMGDKGERGEDFQIDMRMVEGDRGPPGETG
DKGDSLIPPLTSKNETVTKGIIGEKGEKGYMGDFGPRGSEGRQGWPGEPGLKGYRGEEGE
IGDRGKSGKDGPPGPSGEKGHKGAPGYAGYDGADGLKGEPGEPGHYGLPGVQGPPGPKGI
YDPNLDERLPGPQGPQGEMGQIGERGMNGIPGEPGRRGLTGLPGPPGDPGMPGPRGKKGT
SIKGQQGDFGESGPPGPIGPPGEAGPPGRLGLKGFPGRNTYGPKGLPGNNGHDGQHGYQG
DRGEPGLPGPKGLPGIGVNVTGPPGVPGLPGRRGVPGDDGYDGVPGPKGDKGPRGDDCGR
CSPGAPGLKGLKGDSGRPGFPGMYGRKGFVGPRGDRGIMGFPGLKGRKGVDGPSGSPGET
GRVGPKGRPGELIFEGNVVKPDQGDQGDEGYPGDVGKPGRPGEVGLPGKFGARGEKGLQG
LDGIPGIPGRDGAPGRDGRDGLPGENANVPIYFLQGDRGLDGAWGQKGDQGVPGPRGEDG
DIPALNVTEAKGDRGLPGDIGEQGLDGRKGWDGSVGPIGVPGRDGDMGPAGVTIQGPEGF
KGYPGIIGDMGPSGEPGLPGIDGEPGEPGLEGMKGSRGEAGRAILFGEMGFDGEVGPKGI
PGDAGFPGLSGNRGFQGDKGAKGIKGDDGLMGIPGIPGVRGQRGDIIFGRRGPPGLPGRD
GLPASYGDKGARGDPGYQGAIGIFGAKGDIGLPGFSGMPGDAGPPGEPGFVGIPGYRGLD
GEPGERGDQGVPGRFGYPGRPGSIGLHGPKGPVGDQGPQGAPGRPGRDGAKGFRGDFGLM
GLRGQRGEPAFSGVKGEVGVQGLQGLPGIPGRVGAPGLKGAEGDAGEVFDGYPGEKGIPG
DQGRDGRDGYFGLKGERGDTGDIGLIGETGEMGLPGRPGLRGIDGRKGIPGLYGTVGLHG
AKGESGDVGDMGFPGLVGLPGDVGDPGPPGLFGLPGERGDKGFPGIPGIVTPRPAQKGDR
GDRGPHGQTGPKGEPGIKGLPGFPGRKGAMGDFGEQGYPGPDGFVGRKGIMGDKGLRGLR
GMVGAFIEPGEPGLAGIDGFPGRPGQVGPKGVPGDYGDNGPPGAVGLPGESFDGIKGVSG
DFGFQGPPGRPGLPGLRGAMGYRGDTGFKGIQGDIGFSIPGRRGEPGDQGLAGPPGYDGA
KGIPGSPGLPGRAGPRGPTGPRGLEGDSGWNGVDGDDGIPGLRGDRGDSFRYELAIAGEP
GFDGFPGRKGLQGDMGDMGPTGFIGLRGLKGMMGDQGIPGLVGFDGIKGERGLPGPRGLN
GLDGYRGPAGEVGDPAPPPPPGRSRGFVFTRHSQSVHIPDCTANTIKLWDGYSLASVIGG
GQTAGQDLGSAGSCLRKFSTMPFLFCDVNNVCNYAQNNDDSMWLATGEPMTFSMAPIPSR
EVEKYISRCSVCESRTRVIAIHSQSMTIPNCPNGWEELWLGYSYFMYTSDNTGGYGQDLL
SPGSCLEEFRQMPVIECHGHGRCNYYDQLMSFWLTVIEDGNMFKKPVQQTIKMDQSSKVS
RCTVCRKIDLSPRARPAEFPDASALLRPEERVRPPIQPPPRRHRFRRPGANRRPWRPQQN
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtggccaacacccacgagtcccttcaagggccggggaaagaacacacaacaatcatcg
gcagtcttcattatccttgtaatcctccagattgtatcctctgtgagcgctcataagaga
gaatgcgattgcaaagggctaaaggggacaatggggcaaatgggaactccgggtttgcca
ggtcaggagggtcctcatggagatgtaggccctatgggaccaacaggacgaccaggagac
tatggtgataatggagagcatggaatgcttggcgagaaaggcttcaggggtgaaaaaggt
atgccgggatactttggtattcctggctacaatggaactcagggagaaggtggagatcgt
gggccacggggattagatggatgcaatggaactgaaggcaccatgggtagcccaggaatg
ccaggaagaccaggtgtacgtggcccaccgggttatgatggagcacctgggccaaggggt
gatgccggagagggtggcattaattccaaaggcaccaaaggtgatcgtggtgattccggt
gccgatggacgaccaggagatcgtgggtatcccggtgaaattggcatgaagggttaccaa
ggaatgccaggatttgatggcgttcctggtggaatgggcgataaaggtgaacgtggagaa
gattttcaaatagatatgagaatggtggaaggtgatcgaggaccaccaggggagacagga
gataaaggagacagtctcataccaccattaacttcgaagaatgaaactgtaacaaaggga
attataggggagaaaggtgaaaagggctatatgggtgattttggtccaaggggtagtgag
gggcgtcaaggatggccaggtgagccaggtctcaagggctaccgtggtgaggaaggagaa
ataggagatcgtggcaagagtggcaaggatgggccaccaggaccatctggcgagaaggga
cacaaaggagccccaggatatgccggctatgatggagctgatggtttgaaaggtgaaccc
ggagagccagggcattatggtcttccgggtgttcagggtcctccaggaccaaagggtatt
tacgatccgaatctcgatgaacgactaccaggacctcaaggtccacagggagaaatgggg
cagattggtgaacgtggaatgaatggaatcccaggagagccaggccgtaggggactaaca
ggtcttcctggcccacctggtgatcctggaatgccaggacctcgagggaaaaagggaact
tccataaaaggtcaacagggtgattttggtgaaagtgggccaccagggccaataggtcct
cctggtgaagctggccctcctggtcgattaggattaaaaggatttcccggacgaaataca
tacggcccgaaaggcctccccggaaataatgggcatgatggacaacatggatatcagggt
gatcgtggtgaacctggattacctggcccaaagggtcttccgggaataggtgtcaatgtc
acgggccccccaggagtacctgggcttccaggaagacgtggagttccaggagatgatggc
tatgacggtgttcccggaccaaagggtgacaaaggtcctcgtggagatgactgcggtcgt
tgtagccctggtgctcctggtttgaagggtctcaaaggtgattctggacgtcctggcttt
cccggaatgtacggacgaaagggtttcgttgggccacgaggagatcgcggcataatgggt
tttcctggcttgaagggacgtaaaggagtcgacgggccatccggaagccccggtgaaact
ggaagagttggcccaaagggtcgtcctggtgagctcatatttgaaggcaatgtagttaaa
cccgatcaaggtgatcagggtgatgaaggatatcccggagacgttggaaaacccggaagg
ccaggagaagttggacttcccggaaagtttggagctcgcggcgaaaaaggtctacaagga
ctcgatggaatacccggaattcccggcagagatggcgcaccaggacgtgatggacgagat
ggacttccaggagaaaatgctaatgttcccatctatttcctccaaggagatcgtggactg
gatggtgcctggggtcaaaaaggtgatcaaggtgttccaggtccaagaggtgaagacggt
gacatcccagctttgaatgtaacagaagcaaaaggagatagaggcttaccgggagacatt
ggagaacagggattagacggaaggaaaggctgggatggatctgtaggacctataggtgtt
ccaggtagggatggagacatgggccccgcgggggtaacaattcaaggccctgagggattc
aagggctatccaggaataattggagatatgggaccatctggagagcctggactgcctggt
attgatggggaacccggagaacctggtttggagggaatgaaaggaagtagaggagaagcc
ggaagagcaattctcttcggagaaatgggatttgatggagaagttggacccaaaggaatt
cccggtgatgcaggatttccaggtttatctggcaatcgtggcttccaaggagataaaggc
gcaaaaggcataaagggagatgatggtctaatgggaattcccggaatcccaggagttcgt
ggacaacgcggtgatataatattcggcagaagaggtcctcctggattaccaggtcgcgac
ggtttacccgcatcgtatggggataaaggagctagaggagatccaggatatcagggagct
attggtatttttggtgctaaaggtgatattggtttacctggattttctggaatgcccgga
gatgctggcccaccaggtgagcctggctttgttggtattcctggatatcgtggtttagat
ggtgagccaggagagagaggtgatcaaggagtacccggtagatttggctacccaggccgg
ccaggaagtattggattacatgggcccaaaggtcctgttggtgatcaagggccacaagga
gctccaggacgtcctggaagagatggtgcaaagggtttcagaggtgatttcggtttaatg
ggcttacgtgggcaaaggggtgaacctgcatttagtggtgtgaagggtgaagtgggcgtt
caaggattacaaggactccctggaatccctggtcgtgtaggagcacctgggctaaaaggt
gcagaaggtgatgcaggagaagttttcgatggatatccaggagagaagggtattcccgga
gatcagggtagagatggaagagatggatattttgggctgaaaggagaaagaggagacacc
ggagatattggactaattggtgaaacaggtgaaatgggacttccaggaagaccaggctta
cggggaattgatggcaggaaaggcatacccggattgtatggtacagttggacttcatggc
gccaaaggtgaaagtggagatgttggagatatgggattcccaggattggttggattaccg
ggagatgttggagatcctgggccaccaggtctatttggattgcctggagagaggggtgat
aaaggtttcccgggtattcctggtatagttacaccacgtcctgctcagaagggtgatcga
ggtgatcgtggcccccacggacagactgggcccaaaggtgaaccgggtattaaaggactt
cccggattccctggtcgaaagggtgcaatgggagactttggtgaacaaggctatcccggt
cccgatggtttcgttgggcggaaaggtatcatgggagataaaggattgagaggtctacgt
ggtatggttggtgcattcattgaacccggagagccaggtcttgcaggaattgatggcttc
cccgggaggcctggacaagtaggcccgaaaggcgttcctggagattatggtgataatggg
ccaccaggagctgttggtcttcccggtgaaagctttgacggcataaagggtgtctcagga
gattttggcttccaaggccccccaggacgtccaggattgccaggacttcgaggtgcaatg
ggatatcgcggtgatactggattcaagggaattcaaggagatattggattcagtattccg
ggaagacgaggagaaccgggggatcaaggtcttgcagggccacctggttatgatggagct
aaaggaattcccggatcacccggcttacctggccgtgcaggtccacgtggccctacaggt
cctcggggtcttgaaggtgactccggatggaatggtgttgatggggatgacggtattcct
ggactacgaggagatcgaggtgattccttcaggtacgaactcgcaattgccggagaacct
ggatttgatggcttcccagggcggaagggattgcaaggagatatgggagatatgggtccg
actggcttcattggcctccggggtctcaaagggatgatgggtgatcaaggaatccctgga
ttagttggattcgatggcattaaaggtgaacgaggtcttccggggccacgcggtctcaat
gggctcgatggataccgtggccctgcaggtgaagttggtgatccagccccaccaccacca
cctggaagatctcgcggttttgtcttcacgcgtcactcccaatctgtgcacattccggac
tgcacggcaaacaccattaagctttgggatgggtactccttggccagtgttattggtggt
ggacagacagctgggcaagatttgggatcagcaggatcatgcctaaggaaattctcaacg
atgcccttcctcttctgcgacgttaacaatgtctgcaactacgcccagaacaatgatgac
agcatgtggttggctactggtgagccaatgaccttctccatggcacccattccatcgcga
gaagttgagaagtacatctccaggtgttctgtgtgtgaaagccgaacgagagttattgca
attcacagccagtctatgaccataccaaactgcccgaatggatgggaagaactttggctg
ggctatagttacttcatgtacacttccgacaatactggaggctatggtcaggatcttcta
tctcctggctcatgcttggaggaattccggcagatgccagtgattgaatgccacggccat
ggacgatgcaactactacgaccaattgatgtccttctggctcacagtgattgaagatggc
aatatgttcaagaaacctgtccagcaaaccattaagatggatcagtcttccaaagtcagc
aggtgcaccgtttgtcgcaaaattgatctatctccacgtgcccgcccagcagaattccct
gatgcctcagcccttctgaggccagaagagagggtacgtccaccgattcagccacctcct
cgtcggcatcgcttccgacgtcccggtgcaaatcgaagaccgtggagaccccagcaaaat
tag
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