KEGG   Lutzomyia longipalpis: 129791947
Entry
129791947         CDS       T10428                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
lll  Lutzomyia longipalpis
Pathway
lll03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lll00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129791947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lll03019]
    129791947
Messenger RNA biogenesis [BR:lll03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     129791947
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     129791947
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 129791947
NCBI-ProteinID: XP_055686602
LinkDB
Position
3:complement(8948158..8955187)
AA seq 297 aa
MADISLSDAEKTFIVHGVQDDFRTDGRTRRDYRPMEIETDIVSHTSGSARLRLANSDILV
GVKTEIDTPFADHHDEGKIEFFVDCSANATPEFEGKGGESLALEIANALQKAYASHRAFD
LRDLCILKYHQCWKLYVDILILECGGNLFDAVSLAVKAALFNTKIPKVSAVQEDGGNVEL
ELSDDIHDCTRLSIERVPLLVTLCKIGDHSVVDPSAEEEECASAQLVVGISYSESTDEGF
VTMMRTLGAGSFLHTTLKETIKLGVMAGECLNVELLKVLRQEERLGKSSKDVYGFLK
NT seq 894 nt   +upstreamnt  +downstreamnt
atggcagatatttcactgagtgatgccgaaaaaactttcattgttcacggagtacaggat
gacttccgaacagatgggagaactcgacgggattaccggccaatggagattgagacggac
attgtgagtcacacgagtggatcagcaaggcttcgtcttgccaattcagacatccttgtg
ggtgtaaagacggaaatagacaccccatttgctgatcatcacgacgagggaaagattgaa
ttctttgtggattgttcagccaatgctacgccggaatttgagggcaagggtggtgagagt
ctcgctctggagattgccaatgccctgcagaaggcctacgcatcccaccgtgcctttgac
ttgagggatttatgcatcttgaagtaccatcaatgctggaagctttacgtggatattctg
atcctcgaatgtggagggaatctcttcgatgctgtttctttggctgtcaaggcggctctg
ttcaatacgaaaatccccaaagttagtgccgtgcaggaggatggtgggaatgttgagctg
gagctctcagatgacattcacgactgcacgaggttgtcaatcgagagggtaccattgctg
gtgactctgtgcaaaattggggatcactcagttgttgatccttcagctgaggaggaagaa
tgcgcctctgcgcagcttgttgttggaatttcctactctgaatcaacagatgaaggcttt
gtcacaatgatgagaacactgggcgctggttcatttctccacacaaccctcaaggaaacc
ataaaattgggcgtaatggcgggggaatgcctcaatgtggaacttctcaaagtcctccgg
caggaggaacgtctggggaagtcttcgaaagatgtttatggattcctcaaatga

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