Lutzomyia longipalpis: 129792745
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Entry
129792745 CDS
T10428
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5
KO
K11125
protein SMG5
Organism
lll Lutzomyia longipalpis
Pathway
lll03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lll00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129792745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lll03019
]
129792745
03032 DNA replication proteins [BR:
lll03032
]
129792745
Messenger RNA biogenesis [BR:
lll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129792745
mRNA cycle factors
Common to processing body (P body) and stress granule
129792745
DNA replication proteins [BR:
lll03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
129792745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
129792745
NCBI-ProteinID:
XP_055688065
LinkDB
All DBs
Position
3:22511730..22516351
Genome browser
AA seq
1022 aa
AA seq
DB search
MEGSSNNHQQLYRSLLSAVKQLDEQKSSENLTELFGETLHQKRWGFVRKCEYLIYQDDDG
VSPKARVLLWRKGFYEPIAIAKRLVRSQIPTFEEMRRLEGFILSAIGCLKVIFVTLEQRF
DLNLKHLINLRIFGSDFDRITAEEQKEKTYLTAASRTYALETIHSLAISLGDLHRYYLDF
SFLEALGSDASGPECAAVFYFEAFKLNPKVGMPQNQLGTLYTGHNSNLDSIYHYFYALVC
PVPFDLSDDNVAKLLLENATYLEHLDIDNEADYQVTVRDFLARFILIADIFFYDKDVADF
SGLCHALLVDLKWLLEEKRTHLTQDMLYKIVSILFFCMIKLQSLQSDKVHHLNAFLLAIC
AQLIGSCIQRVEEFIQQHEGQNTLFREAYLQQYEAYDRNVREARRERQKKMTDVTKKAPS
MSSYSDRNSLSVGGSSQIEKGNQQQPPKEARKVKSTKLRRRRKRGQSTSSSESDLTSNFD
SDSELSDVSSALSDTEDEEEDEENAPGDFPTDKATFNDFSMINLNGLTFNEVQQHAEDDD
DVVVEEETIIFPTGDNPPELTVEVAKEEEEAAQLDVPKKMKFKQKFHKVDPNIIVEFAQT
EITLKAIKVLFDWLRNNREIVISCHQTNPEFIHQTMTLLNHFNIDIFTSKVFFERQMLNV
GGIRENLRELFDERLHIPIHEDMALKQLPLFVANQEQLDWEISSKMDVSACEENLLRLFK
MLDFGFYICKTFKFNYVFCTKGRIFVENFLAKKKRRTKRAKVKQVDTAKRRQARIRPQSG
PPKVASDASEDDGESSSGRKNATKRGYLRSRNAGNVTENEERDRKIEDGDKSEKYALMGK
LWLRSEVKSLESKVKKPNGLHLTPYLMMDSKSLTEYQTTVRNLVKARKFVVLIPNAVLSE
LDELKKHSDRARNVIRWLEQEFKKGNRFLRSQRDHETLPLPLIKTPKKIDREASVFLQIA
QFCNYIVTNQMNPDGSTDAVTLLTGENLVEKKCPHFSYYGILNSIPVKFDQIQGFYAKYR
KK
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttccagcaacaatcatcagcagctttacaggtctctcctgtcagcagtcaag
caattggatgagcagaaatcatcagagaatcttacggaattgtttggggagacattgcac
cagaaacgatggggatttgtgagaaaatgcgaatatttgatctatcaggacgatgacggc
gtcagcccaaaggcaagggtcctcctgtggcgtaagggcttctatgagcccattgcaatt
gccaagcgcttggtgcgcagccaaattcccacgtttgaggaaatgaggcgcctcgagggg
ttcattttgagtgccattgggtgcctaaaggttatttttgtgacattggagcaacgcttt
gatctcaatctcaagcatttgatcaatctacgtatctttgggagtgatttcgaccgaatc
accgcggaggagcagaaagaaaagacttatctgactgctgcttcacgcacctacgccctc
gagaccattcattctttggccatttctctgggagatctccatcggtactatcttgatttc
tcatttctcgaagcattgggaagcgatgcaagtggcccagaatgtgcagctgtcttctat
tttgaagctttcaaactaaatccaaaagtgggaatgccccaaaatcaactggggaccctc
tacacgggacacaatagcaatcttgattcaatctatcactacttctacgctctcgtgtgt
ccagttccctttgatctgagcgatgacaatgtggcaaagttgctgcttgagaatgccacc
taccttgagcatttggatattgacaatgaagcagactaccaagtgactgtacgagatttc
cttgcacgcttcatcctcattgcagacattttcttctacgacaaagatgtggcggatttc
agtgggctctgtcatgccctcctggtggacctcaagtggctgctggaagagaagaggact
catcttacgcaggatatgctgtacaagattgtatcaattctcttcttctgcatgattaag
ctgcagagcttgcagtccgataaggtgcatcatctcaatgcttttctcctggcaatttgt
gctcagctcattggatcgtgcattcagcgtgtggaggagtttatacagcaacatgagggg
caaaacaccctcttccgcgaagcatatttgcagcaatatgaagcttacgatcgcaatgtt
cgcgaggcaagacgggaacgtcaaaagaagatgacagacgtgacaaagaaagccccatca
atgtcttcctattctgatcgcaatagtctctccgtgggtggatcgagtcaaattgagaag
ggaaatcagcagcaaccgccaaaggaagcccggaaggtgaagtcaacaaagctacgacgt
cgtcgaaagagaggacaatccacgagttcatctgaaagtgatttaacatcaaattttgat
tctgattctgaactatcggatgtatcgtctgctctctcggatacggaagatgaggaggag
gatgaggagaatgctccaggagattttcccactgataaagcaactttcaatgatttctcc
atgattaatctcaatggtttaacttttaatgaagttcaacaacacgctgaagatgatgat
gatgttgttgtggaggaggagaccattatcttcccaacaggagataatccaccggagttg
accgtggaggtggctaaagaggaggaagaagcagcccaattggatgtgccgaagaagatg
aaattcaagcagaaattccacaaagtcgatccgaatattattgtggaatttgcacagacg
gagataacactcaaggcgattaaggtgctgtttgattggttgagaaataaccgggaaatc
gtgatcagttgccatcagacaaacccggaattcatccatcagaccatgacgctgctcaat
cacttcaacattgacatcttcaccagtaaggtcttctttgagcgtcaaatgctcaatgtg
ggtggaattagggagaatctccgggagctctttgacgagagactccacattcccattcac
gaggatatggcactgaagcagttgccgctctttgtggccaatcaggaacaacttgactgg
gagatttcgtcaaagatggatgtttcggcgtgcgaagagaatctcctgcgactcttcaag
atgctcgattttggcttctacatttgcaagacgttcaaattcaactatgtcttttgcacc
aaggggaggatttttgttgagaatttcctggcgaagaagaagagacgcacaaaacgtgcc
aaagtcaagcaagtggacacagcgaaacgtcgtcaggcacgtataaggccccaaagtgga
cccccaaaggtggccagtgatgcatccgaagatgacggagagagcagctcagggcggaag
aatgcaacaaagaggggctacttgcggagccgcaatgcggggaatgtgactgagaatgag
gaacgcgataggaagattgaggatggagataagagtgaaaagtatgcgttgatgggaaaa
ctctggctacggagcgaggttaaatctctcgaatccaaggtaaagaaaccaaatggactt
cacttaacaccctaccttatgatggattcaaaatcactcacggaatatcagactacagtg
aggaatttggttaaggctcgaaagtttgttgttctcatcccaaatgccgttctttcggaa
ttggatgagctgaagaagcacagtgatcgtgcgaggaatgttatcagatggttggagcag
gaattcaagaaaggcaatcgtttccttcgttcgcagcgagatcatgagacactccccctg
ccgcttataaagacccctaaaaagattgatcgcgaagcttcagtgtttctgcagattgcc
caattttgcaattacatcgtaacaaatcaaatgaatcccgatggaagtacagatgctgtt
accctgctgactggagagaatttggtggagaagaaatgcccacatttcagctattatgga
attctcaattcaattcccgtaaaatttgatcaaattcagggattctacgccaagtatagg
aagaagtga
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