Lutzomyia longipalpis: 129795734
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Entry
129795734 CDS
T10428
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lll Lutzomyia longipalpis
Pathway
lll03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lll00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129795734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lll03021
]
129795734
03036 Chromosome and associated proteins [BR:
lll03036
]
129795734
Transcription machinery [BR:
lll03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129795734
Chromosome and associated proteins [BR:
lll03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129795734
PBAF complex
129795734
GBAF(ncBAF) complex
129795734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Rop
BRCT_2
Motif
Other DBs
NCBI-GeneID:
129795734
NCBI-ProteinID:
XP_055693191
LinkDB
All DBs
Position
1:complement(18740168..18745411)
Genome browser
AA seq
1138 aa
AA seq
DB search
MVSLGQKKDGSPNVEFFQSPETLQGFETVRAWLQKNSKKYVHQDPPTKESLSQLLIQFIQ
YQETKLGKNAVDPPTTRLPMRCFLDFKPGGALCNIFTSMYRYKSEQRWKKFDFTVTKNTS
RKDPNTQMLVEIETALIEAECLRLPVVYIRPEVDKALAAKVKDIITKHQGELTEDEEEAT
HIIYPVVDPLPEEYARPAFKREKNVMMHWYYFPESYDSWLPNNFDLPDMVPDNIGSPGDR
WRVCALWVLHLDQYNEWMAEEDYEVDEQGRKKVHRLRLTVDDLMTPSGDEKSRARNKNPK
RKRSPTPPPNPKTSKRKSGRSPAVFQKKTRSGDGDDDEDLTRDMDDPQPEPNIQEVPKVQ
PNTSSTASPATPSNKQRDSELLPIKGGTVTDLDEDMERGEDSQTGKTSDNSNTQDFQPKD
DLEDNVTEQTHHIIVPSYSAWFDYNSIHVVEKRAMSEFFNGKNKSKTPEIYMAYRNFMID
TYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDTDCRPTPMGPPPTSHF
HVLSDTPSGLQPVNAQKTPQPSASKMLFDLDKKQKDKEGGEGATPGALGGATVKTEGGVA
PPVPGGIEPGAQFGLKLDQYGKKPSAMRNKTAANMAREWTEQETLLLLEGLEMYKDDWNK
VCEHVGSRTQDECILHFLRLPIEDPYLEDDNCIGPLAYQPIPFSKSGNPIMSTVAFLASV
VDPRVAAAAAKAAMEEFAAIKDEVPSSIMDAHFKNVEKSGYGGKFDPYAGLANSGIAGTA
PEKEEDEKQPGGDEEMKDVSKKDDKTQESSGAEACKTSDPSAVGDKSSLKITEAAAAPSD
SSCNDESKSSEKTSSETTPGSPPIQAAAGGAAAPPGGAPGAPAVANVNGAAAATAGTAAK
ENGTDKPKLFNEANVQSAAAAALASAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKL
RHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQGQQQQ
QQQQQQQQQWQQNPNAPASAGSTPGPQQPPQQPAPPHQAIVPPTQQPSGGGGPPGAVVQP
PPQQVPPSASAVVPAQGQLPPQPPAPSQQQQPQPQQQPPAGGSLPGGNGAPPSIPSRP
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgctggggcagaaaaaggatggtagtcccaatgtggagttcttccagtccccg
gaaacgctacagggatttgagacagtgcgtgcgtggttgcagaaaaacagcaagaagtac
gtccaccaggatccaccaacgaaggaatctttgtcacagctgttgattcaatttattcag
tatcaggaaacaaaattgggcaaaaatgcagttgatccaccaacaacgagactcccgatg
cgatgtttcttggatttcaagcccggtggggcgctatgcaatattttcacgtcaatgtat
cgctacaagtcggagcagcgatggaagaaatttgattttacagtgactaaaaatacatcc
cggaaggacccaaatacacagatgctggttgaaattgaaacagctctcattgaggcagaa
tgcttacgactgccagttgtctacattcgtccggaagtcgataaggcacttgcggcaaag
gttaaggatatcataacaaagcaccagggtgagttgacggaggatgaggaggaggcaaca
cacataatctaccctgttgtggatcccctacctgaggagtatgctcgtccggcatttaag
cgtgagaagaatgtcatgatgcattggtactacttcccggaatcctatgattcgtggttg
ccgaataattttgaccttccggacatggtgccagacaatattggcagtcccggggatcgt
tggagggtgtgtgcgctgtgggtactgcatttggatcagtacaacgaatggatggccgag
gaggactacgaagtggatgagcagggacgcaagaaggtgcatcgccttcgacttacagtt
gatgacctcatgacaccgagtggggatgagaagagtcgtgcaaggaataagaatcccaaa
cgtaaacgctccccaacacctccgccaaatcccaagacgagcaagaggaagagtggacgt
tctccggctgttttccagaagaaaactcgcagtggggatggggatgatgatgaggatctc
acgcgtgatatggacgatccacagccagagccaaacatccaagaggtgccgaaggtgcag
ccaaatacatcctcaacggcgagccccgcaacgccatcaaataagcaacgagattcggaa
cttctacccataaaggggggtactgtgacggatctcgatgaggacatggagcgcggggag
gattcacagacgggcaagacgagtgacaacagcaacacacaggatttccagccaaaggat
gatctggaggacaatgtaaccgagcagacgcatcacatcattgtcccttcgtattctgcg
tggtttgactacaattccatccatgtggtggaaaagcgcgccatgtcggagttcttcaat
ggcaagaataagtccaaaacacccgagatctatatggcatacaggaatttcatgattgac
acgtaccggctgaatccaacggaatatctcaccagtaccgcatgtcgacgcaatttggcc
ggagatgtgtgcgccataatgcgtgttcatgccttcctggagcaatggggcttgataaat
taccagattgacacggattgccggccaacaccaatgggtccaccacctacatcccacttc
cacgtcctgagtgacacaccatcaggattgcagccggtcaatgcacagaagacacctcaa
ccgtctgcttcgaagatgctctttgatttggataagaagcaaaaggacaaggagggtggt
gagggcgccactccgggagctctcggcggggcgacagttaagacagaaggtggtgtagca
cctcctgtacccggtggtattgaaccaggggcacaatttggcctgaaactcgatcagtat
gggaagaaaccatcggcaatgcgcaataagacagcagcaaatatggcacgagagtggaca
gagcaggaaaccctgctactccttgagggtttggagatgtacaaggatgattggaataag
gtgtgtgagcatgttggttcccggacacaagatgagtgtattctgcacttccttcgacta
cccattgaggatccctacctggaggatgacaactgtattgggccacttgcctatcaaccc
attccatttagtaaatccggcaatcccattatgtccactgtagccttcttggcttccgtt
gtggatcccagagtggcagcagctgcagccaaagctgccatggaggaatttgctgctata
aaggatgaggttccatcgtcaataatggatgcacattttaagaatgtcgagaagtccggg
tatggtgggaaattcgatccatacgctggtttagcaaatagcggaattgccggaacggcc
ccggaaaaggaggaagatgagaaacaaccaggtggtgatgaagaaatgaaggatgtttcc
aagaaagatgacaaaactcaagaatcaagtggtgcggaggcatgcaaaacgagtgatccg
tctgctgtgggcgataagagtagcctcaagatcacagaggctgctgctgcgccgtcagat
agtagttgtaatgatgaaagtaaaagtagtgaaaaaacatcttcagaaaccaccccggga
tcaccgcccattcaagcggcagctggtggagcagcagcacctccagggggtgcacccggc
gccccggctgttgctaatgttaatggggctgctgctgctacggcaggaacggcggcaaag
gagaatgggacggataagccgaagctcttcaatgaggccaatgtccagtcggctgcagct
gcggctcttgcgtcagcggccgtcaaagcgaagcacctggcagccgtggaggagaggaaa
atcaagagtctcgtggcactcctggtggaaacgcagatgaagaagttggagattaaatta
cggcattttgaggagcttgaaacaacgatggaacgcgagagggaaggtttggagtatcag
agacaacaactcattacggagagacagcaattccacttggaacagctgaaggcagctgaa
tttagggcacgtcagcaggcacatcatcgattgcagcaggaacagggacaacagcaacag
cagcagcagcagcaacaacagcagcagtggcaacaaaatccgaatgccccagcatcagca
ggaagtactccggggccacagcagccgccgcaacagccggcaccgccgcatcaggctatt
gtaccgccaacacagcagccatcaggaggtgggggtccacctggagctgttgttcagcca
ccaccgcagcaggttccgccatcagcgtcagcagttgttccagcacagggacaacttcct
ccacaaccaccagcaccgtcacagcagcagcagccacagccacagcagcaacctccagct
ggtggtagtttacccggtggcaatggggcgcccccatcgatacccagcagaccctag
DBGET
integrated database retrieval system
