Lutzomyia longipalpis: 129796990
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Entry
129796990 CDS
T10428
Name
(RefSeq) SKI2 subunit of superkiller complex protein
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
lll Lutzomyia longipalpis
Pathway
lll03018
RNA degradation
Brite
Enzymes [BR:
lll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129796990
Messenger RNA biogenesis [BR:
lll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129796990
mRNA degradation factors
3'-5' decay
Ski complex
129796990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129796990
NCBI-ProteinID:
XP_055695170
LinkDB
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Position
1:118146..121788
Genome browser
AA seq
1151 aa
AA seq
DB search
MEVPDNLRDYIVNPYLELLENMQPQCLEIKSDPNNVFNISEPVFGTTLRPRRSYETGEII
DFEEIQLEDPDSRADNSMSLQRAPDASGKGSSVRGSSTNYPFWPGGFEEEKENVEELIAE
EGQLLTLAPGFTHAISSSAEGIDEALKHLKIVEMDFTDLIRSNPIYDLWAEKRAVQKPRP
QVLKVSTAKDITTVETKWAVEIDTRQAIPTTTTEPALVFPFKLDNFQKHAIHQLEDHNHV
FVAAHTSAGKTAVAEYAIALSLKHHTKAIYTSPIKALSNQKYRDFKKTFKDVGLITGDVQ
IDSDASCLIMTTEILRSMLYCGSEIARDIEYVIFDEVHYITDADRGHVWEETLILLPANV
TIVMLSATVPNTLEFASWVGQTKKKKVYVVSTLKRPIPLKHYLYVPFVAKNKEEIHLILD
ENGKFHNKGHMDAVALKEATSAKIGRKLTPNQEKTMWEKLVGYLRKTDKLPVVAFTLSRK
RCDMNAESMRGCDLCTNKEKGIINDFFKRCLQTLKPPDRALPQVQNLQYYLERGYGVHHS
GILPILKEIVEMLFQCGLVKLLFATETFAMGVNMPARTVIFDSDRKFDGTAVRNLYPAEY
TQMAGRAGRRGLDENGTVILICKSEKVPDIPSLQGMMLGKPMRLESQFKLTYAMILNLLR
VERVSVVDMMSHSYREFHSQQKLPENMIKLREVQKEFAQLPPLEDNLQPLCEFYSVASDY
FGCVDRVNQEVFKHPEVKKKLQPGRLVVITKGSLCNNLAVILTLTEGQRKETELKVAVLG
NPQVEQEDEKEDAWHRLLSLATAGKIHIPDNVAAFTVLPIKLKHIVEIVNSSVKIQPATI
IQNWEQKQIERFKDAPLGPSSLKLVADLNNFLEGTTKVEFVNMYENIPLSVIDDKKELTL
HKQKLSTVLRCTKVSNFRERFRGVFERKLLEQRLQHLKYITSKDNMTLYPDYCNKLEVLR
EIRYIDEQNNVTMKGRVACEMGSNELIITEIIFRNIISNLEAAEIAALLSGLVFQAKTES
TAIPTVSLKKGIAEVEAINDEIFNLEQKHRVSTSLDAQAKPKLNFGLVEVVYEWGRNKPF
AEIKELTDVQEGIIVRCIQQLHEILLNIKDASRVFGDPVLHAKMEDVSNAIKRDIVFAAS
LYTQKDIELIH
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgcctgataatttaagggattacattgttaatccctatttggagctccttgag
aacatgcaaccgcaatgtttggaaatcaaatctgatcctaacaatgttttcaatatctct
gagcctgttttcgggaccacactgcgtcccagaaggtcctatgaaacaggtgaaattatt
gactttgaggaaattcaattggaagatccagatagccgagcggacaattcaatgtccctc
caacgagctccagatgcgagtggtaagggatcgtctgtacgtggctcatctacaaactat
cccttctggccaggaggttttgaggaagaaaaagagaatgtggaagagttgattgcggaa
gaagggcagctgttgactttggctccaggattcacgcatgctatttccagcagtgctgag
ggtattgatgaagcactgaaacatttgaagattgttgaaatggactttacggatttaatt
agaagtaacccaatttatgatctttgggcagagaagagggcggtgcagaagccacgacca
caagtgctcaaagtcagcactgcaaaggatatcacaactgtggaaacaaagtgggcagtg
gaaattgatacgcgccaggcaattccaacaaccacaactgaaccagctttggtgtttccc
ttcaaattggacaacttccagaagcacgccattcaccagctcgaagatcacaatcatgtc
tttgtggccgctcatacgtcagctgggaaaactgctgtggcagagtatgccatcgccctg
agtctcaagcaccacaccaaagcaatctacacatccccaattaaggcgttgtccaatcaa
aagtacagagactttaagaaaactttcaaagatgttggtctcattacgggggatgttcag
attgattcagatgcttcatgcttgatcatgaccaccgaaattcttcgatcgatgctctac
tgtggtagtgagattgcccgggatattgagtacgttatcttcgatgaagttcactacatt
accgatgcagaccgagggcacgtgtgggaagaaacactcattctgttgccggcaaatgta
accattgtcatgctaagcgctacggttccgaatacacttgaattcgcctcgtgggtgggt
caaacaaaaaagaaaaaggtctacgtggtaagcacactaaagcgccccatccccttaaaa
cactacctgtacgtacccttcgtggcgaagaacaaagaggagattcacctgatcctggat
gagaatgggaaattccacaataaaggacacatggatgctgtggcacttaaggaagcaact
tccgcaaagattgggcgtaaattgacgccgaatcaggaaaagacaatgtgggagaagttg
gtgggttatctccggaagacggataaattgcccgttgttgcatttacactttcccgcaag
agatgcgatatgaatgctgaatctatgcgtggatgcgatttgtgtacgaataaggagaag
gggatcatcaatgacttcttcaagcgatgcctgcagacgctcaaaccaccggatagagca
ttgccacaggtgcagaatcttcagtactacctcgaaaggggctacggagtgcatcattcg
ggaattttgccaattctcaaggagatcgttgagatgctcttccagtgtggcctcgtgaag
cttctctttgccacggaaactttcgcaatgggcgtcaatatgcccgcacgaacagtaatc
tttgattctgatcgcaaattcgacgggacagccgtgcggaatctctatcctgctgagtac
acacaaatggcaggacgtgctggacgccgaggactggatgagaatggaactgtcatcctc
atttgcaaatccgagaaagttccggacattccgtcattgcagggaatgatgctggggaaa
ccaatgcgacttgagtcacaatttaaactcacctatgccatgattctcaatcttttgcgt
gtcgagagggtctccgtggtggatatgatgtctcacagctatcgagaattccattcacag
cagaaacttccggaaaatatgataaaactccgagaggttcagaaagaatttgcccaattg
ccacctttggaggataatcttcagcctctctgtgaattttacagcgtggcatcggattac
tttgggtgtgtggatcgtgtgaatcaggaggtctttaagcatccagaggtgaagaagaaa
ctccaaccaggacgccttgtggtaatcactaaagggagtttgtgtaacaatcttgctgtg
attctcaccctaactgagggtcagcggaaggaaactgagctgaaggtagctgtgctggga
aatccgcaagtggagcaagaagatgagaaagaagatgcttggcatagactcctttcacta
gccaccgcaggaaaaattcacattccagacaatgtggctgctttcacggttctcccgata
aaattgaagcacattgtggagattgtcaatagctccgtgaagattcagccagcgacgatt
attcaaaattgggaacagaagcaaattgagagattcaaagatgcccctctgggaccgagt
tcactgaaattagttgctgatttaaataatttcctggagggtacgacaaaagtggaattt
gtcaatatgtatgagaatatccccttgtctgtaattgatgacaagaaggagttaacactg
cacaagcagaaactctcaactgtactacgctgtactaaagtaagtaacttccgtgaacgc
tttcgtggagtctttgagcggaagctcctggagcagcgtctgcagcatctcaagtatatc
acttcaaaggacaacatgaccctctacccggactattgcaacaaactcgaggtactccgg
gagatacggtacattgatgagcagaataatgtcacaatgaaggggagagttgcttgtgag
atgggctccaatgagttaatcatcacggaaattatcttccggaatattatttcaaatcta
gaagccgctgaaattgcagctcttctgtcgggattagtcttccaggcaaaaactgaatca
accgccatcccgactgtgagtctcaaaaagggaattgccgaagttgaagccatcaatgat
gagatcttcaatcttgagcagaagcatcgtgtatccacatctctcgatgctcaagcaaag
cccaagttgaattttggacttgtcgaggttgtatacgaatgggggagaaataaaccattt
gcagaaattaaggagctcaccgatgtccaggaagggattattgtacgatgcattcagcaa
cttcatgagattcttctcaacattaaagatgcctcgagggtttttggtgatcctgtgttg
catgccaaaatggaggatgtctccaatgccatcaagagggacattgtcttcgccgctagt
ttgtacacacaaaaggatattgagttgattcattga
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