Lactococcus lactis subsp. cremoris MG1363: llmg_0876
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Entry
llmg_0876 CDS
T00475
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
llm
Lactococcus lactis subsp. cremoris MG1363
Pathway
llm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
llmg_0876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llm03019
]
llmg_0876
Messenger RNA biogenesis [BR:
llm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
llmg_0876
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
BHD_3
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
CAL97471
UniProt:
A2RJL8
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Position
845351..847063
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AA seq
570 aa
AA seq
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MSNIKITPLGGVREFGKNMYLVEVEEQIFVLDAGLKYAEMDQLGVDFVIPDITYLLENAD
RVAGIFLTHGHADSIGALPYIVSELKVPVFGSELTIELAKINVKNYADSRKFNDFHVVTE
DTEIDFGKAVISFFSTTHTIPESLGIVISTTDGNIVYTGDFRFDPAVAKGYRTNMRRLAE
IGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDHIDDNEGRVIIACNAGNLGRIQQTID
AAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKFADNELVILETGRMG
EPLKALGDMAHRRHKYVKIKDGDLVLAVTSPSVSYETTIARIENEIYKAGGVMKMLASDL
KISGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAMEMDILPEHIFIAKRGETVS
LENGDMVPAGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISKTERKIVSK
SRVHTRGFVYVKTSRDLMREAGELVNETVDKYLAGKEFDWAEIKGSIRDALGKFLYEQTK
RKPVILPVVMEARQPQDLNKRYTKKNHNKK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatattaaaatcaccccattaggtggtgtacgtgaatttggtaaaaacatgtat
ttggttgaagttgaagagcaaatttttgtgcttgatgcagggcttaaatacgctgaaatg
gatcaacttggtgttgattttgttattcctgatattacatatctcttagaaaatgctgac
cgcgtagctggaattttcttaacccatgggcacgcggactctattggcgctttgccttat
attgtttctgaattaaaagttcctgtatttggttcagaattgacaattgaacttgcaaaa
attaatgtaaaaaattatgctgacagccgtaagtttaatgattttcatgttgtcactgaa
gatacagaaattgactttggtaaagcagtgatttctttcttctcaacgacacatacgatt
ccagaaagtttaggaattgtcatctcaacaactgacgggaacattgtttatacaggtgat
ttccgttttgacccagcagttgccaaaggttaccgtacaaatatgcgtcgcttagcggaa
attggaaatagtggcgttcttgccttgctttcatcatcaccaaatgctttgtcaacaatg
caatctgccagtgaacatgaaatttatgaaaaaatttatgaccacattgatgacaatgaa
ggtcgggtcattattgcttgtaatgcaggtaacttaggacgaattcaacaaacgattgat
gcagcaatcaagctcggtcgtcgtgtcgcctttactggtgaggacatggaccaaattatt
gaaacagcaactcgtcttaataaattacaaattgttgataaaaaatcaatcattaaacca
gctgaaatcaaaaaatttgctgataatgaattagttattttagaaacaggacgaatgggt
gagcctctcaaagcattgggagatatggctcatcgccgtcataaatacgttaaaattaaa
gatggagatttagtccttgctgtgacaagtccatctgtctcttatgaaacaacgattgct
cgtattgaaaatgaaatctataaagctggtggtgtcatgaaaatgttggcttcagatttg
aaaatatctggtcatgctaatgcccgcgacttacaatttcttcttgatatcttccgtcca
aaaaacttgattccaatccaaggtgaataccgtgaacttagtgctcatgctgatttagct
atggaaatggatattttgccagagcatatctttattgccaaacgcggtgaaaccgtaagt
ttggaaaatggagacatggttcctgctggagtcattcaagctgaaaatgttatgattgat
ggttcaggagttggagatatcggttcagttgttttacgtgaccgtaaagtcttgtcagaa
gatggaattttcattgcggttatcacgatttctaagacagaacgcaaaattgtcagcaaa
tctcgtgttcatactcgtggttttgtttatgttaaaacatcgcgtgacttgatgcgtgaa
gctggtgagttagtaaatgaaacagttgacaaatatcttgcaggtaaagaatttgattgg
gcagaaattaaaggttcaattcgtgatgctcttggtaaattcttatatgagcaaacaaaa
cgtaaaccggtgattcttccagtcgtgatggaagcccgtcaacctcaagatttaaacaaa
cgttacaccaaaaaaaatcataataaaaaataa
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