Lactococcus lactis subsp. cremoris MG1363: llmg_1982
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Entry
llmg_1982 CDS
T00475
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
llm
Lactococcus lactis subsp. cremoris MG1363
Pathway
llm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
llmg_1982 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llm03021
]
llmg_1982 (rpoB)
03400 DNA repair and recombination proteins [BR:
llm03400
]
llmg_1982 (rpoB)
Enzymes [BR:
llm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
llmg_1982 (rpoB)
Transcription machinery [BR:
llm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
llmg_1982 (rpoB)
DNA repair and recombination proteins [BR:
llm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
llmg_1982 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
CAL98553
UniProt:
A2RML9
LinkDB
All DBs
Position
complement(1966555..1970145)
Genome browser
AA seq
1196 aa
AA seq
DB search
MAGHDVKYGKHRTRRSFSRIKEVIGLPNLIEVQTLSYKNFLDEGLANVFKEMFPIDNFAG
TMELEFVGYEMKTPKYTVEEARAHDANYSAPIYVTFRLVNKETGELKTQEVFFGDFPLMT
EMGTFINNGSERLIVSQLVRSPGSYFHLKTDKNGLESFGHTTIPNRGAWFELDTDAKGIG
YVRIDRTRKLTFTTMLRALGFGSDDEILELLGETQLLTDTIAKDVHKNPADTRVEEALKD
IYDRLRPGEPKTADSSRGLLVARFFDPKRYDFAPVGRYKFNKKLALKNRLLGLTLAEPIV
DPETGEILVNTDTLVTRDVLDLIEPLLDNGLGNFVVEPSDDAVIPEPITLQSIKVYSPKD
SERVVTLLSNGNPDSECRVLTPADVISNISYWLGLAEGIGKVDDIDHLGNRRIRSVGELL
QNQVRIGLSRMERVIRERMSSSENENITPQGLINIRPVTASIKEFFGSSQLSQFMDQHNP
LSELSHKRRFSALGPGGISRDRASYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYAK
VNEYGFIMSPYRRVDRVNGIVTDEVEYLTADEEDNYTVAQANSPLTDDSRFANETVMARH
TGNNIEVEASTADYMDVSPKQVIAVAAACIPFLENDDSNRALMGANMQRQAVPLIDPHAP
WIGTGMEHQTARDSGAALLAKHAGVVEYVDGNEIRVRRTSGELDIYNITKYRRSNSGTSY
NQRPLARLGEKVEKNDIIADGPSMENGEMALGQNPLVAYMTWEGYNFEDAVIMSERLIKD
DVYTSIAIEEYESETRDTKLGPEEITREIPNVGDEALKNLDESGIIRIGAEVKDGDLLVG
KVTPKGETDPTPEERLLRAIFGEKAREVRDTSLRVPHGGGGIVHDVRVFTRENGDELPSG
VNKLVRVFIAQKRKIHVGDKMAGRHGNKGVVSNIVPVEDMPYLPDGTPIDIMLNPLGVPS
RMNIGQVMELHLGMAARTLGIHIATPVFDGASDEDIWDTVKEAGMAADAKTVLYDGRTGE
PFDNRISVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAANVLQEILTYKSDDVIGRTRAYEAIVKGERIPKPGLPESFRVLVKELQSLGLDMKV
LDADRNVLDLRELDEDEVMTRPDNTEITPEMLEAQEAIVAQAEAEEEALINADIEK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgacgtaaaatacggtaaacaccgtacaagacgcagtttttcacgtatt
aaagaagtaatcggtttgccaaacctcatcgaagttcaaacattaagttataaaaacttc
ctcgatgaaggtcttgcaaatgtcttcaaagaaatgtttccaatcgacaactttgcgggt
acaatggaactcgaatttgttggttatgaaatgaaaaccccaaaatacactgttgaagaa
gctcgcgcacatgacgcaaactattcagcacctatctatgtaacattccgtcttgtaaat
aaagaaactggtgaattaaaaacacaagaagtcttctttggtgacttcccactcatgact
gaaatggggacatttatcaataatggttcagaacgtttaatcgtcagccagttggtacgt
agtccaggttcatatttccaccttaaaacggataaaaatggtcttgaaagttttggacat
accacaattcctaaccgtggagcttggtttgagttggatacagatgctaaaggcattggt
tatgttcgtattgaccgtactcgtaaattaactttcacaacaatgcttcgtgcgcttgga
tttggttcagatgacgaaatccttgaattgttgggtgaaactcaacttttgacagacaca
attgcaaaagatgttcataaaaatccggctgacactcgtgtagaagaagccctcaaagac
atctatgaccgcttgcgtccaggagaaccaaaaacagcagacagctcacgtggcttactt
gttgcgcgtttcttcgatccaaaacgttatgattttgctcctgttggacgttataaattt
aacaaaaaactagctcttaaaaaccgtttgcttggtttgactttggctgagccaattgtt
gatccagaaactggcgaaattcttgttaatacagatacacttgtgactcgtgatgtgctc
gatttaatcgaaccattgcttgataatggtcttggaaacttcgttgttgaaccttctgac
gatgcagtaattccagaaccaatcactttgcaaagtattaaagtttattctcctaaagat
tcagaacgtgttgtgacattgctctcaaatggtaatccagattcagaatgtcgtgtcttg
acaccagccgatgttatttcaaacatcagctactggcttggacttgctgaaggaattggt
aaagtagacgatattgaccacttaggtaaccgtcgtattcgttcagttggtgaattactt
caaaaccaagtacgtatcggactttcacgtatggaacgtgtcattcgtgaacgtatgtca
tcttcagaaaacgaaaatatcacaccgcaaggtttgattaacattcgtcctgtaacagct
tcaatcaaagaattctttggttcatcacagttgtcacaatttatggaccaacataatcct
ttgtctgagctttcacacaaacgtcgtttctctgccttaggacctggtggtatctctcgt
gaccgtgcttcatatgaagtgcgtgacgttcactacactcactatggccgtatgtgtcct
attgaaacacctgaaggaccaaacatcggtttgattaacaacttgtcatcatatgccaaa
gttaatgaatatggtttcatcatgtcaccatatcgtcgcgttgaccgtgtgaatggaatt
gttactgacgaagttgaatatttgactgccgatgaagaagataactacactgtagcccaa
gcgaactcaccattgactgatgatagtcgctttgctaatgaaacagttatggctcgtcat
acaggtaacaatattgaagttgaagcttcaacagctgactatatggatgtttcacctaaa
caggttatcgccgtcgctgctgcttgtattcctttcttggaaaacgatgactccaaccgt
gccctcatgggtgccaacatgcaacgtcaagcagttccattgattgacccacatgcacct
tggattggtactggtatggaacatcaaaccgctcgcgactcaggagctgctcttcttgct
aagcatgcaggtgtagttgagtatgttgacggtaatgaaatccgtgttcgccgtacatct
ggtgaacttgatatttacaatattacaaaatatcgtcgttctaactcaggaacttcttat
aatcaacgtccattggctcgtcttggcgaaaaagttgaaaaaaatgacatcatcgctgac
ggtccatctatggaaaatggagaaatggcccttggtcaaaatccactcgttgcctatatg
acctgggaaggttataactttgaggatgccgtaatcatgtctgaacgtttgattaaagat
gacgtttatacatcaatcgcaatcgaagaatatgaatcagagactcgcgatacaaaactt
ggccctgaagaaattacacgcgaaattccaaacgtcggggatgaagcactcaaaaacctt
gatgaatcaggaattatccgtattggtgccgaagttaaagatggtgatttgcttgttggt
aaagtaacgcctaagggtgaaactgacccaacaccagaagaacgtttgcttcgtgcaatc
ttcggtgaaaaagctcgtgaagttcgtgatacttcacttcgtgttcctcacggtggaggc
ggtatcgttcatgacgttcgcgtatttacccgtgaaaatggtgatgaattaccatcaggt
gtgaataaactcgttcgtgtcttcattgctcaaaaacgtaagattcacgttggggataaa
atggccggtcgtcacggtaacaaaggggttgtttcaaatatcgttcccgtggaagatatg
ccttacttaccagatggaacaccgattgatatcatgttgaacccacttggcgtaccatca
cggatgaatattggacaagttatggagctccatttaggtatggctgctcgtacacttggt
attcacattgcgacaccagtgtttgatggagcctctgatgaagatatctgggatactgtt
aaagaagctggtatggctgctgatgcgaaaacagttctctatgacggacgtactggtgaa
ccatttgataaccgaatttcagtcggtgtcatgtacatgattaaacttcaccacatggtt
gatgataaactccatgcacgttcagttggtccttactcactcgttacacaacaaccgctc
ggtggtaaagcacagttcggtggacaacgtttcggggaaatggaggtttgggcgcttgaa
gcttatggtgctgccaatgttcttcaagaaatcttaacttacaaatcagatgacgtaatt
ggacgtacgcgcgcctatgaagctatcgttaagggtgaacgtattcctaaaccaggtctt
cctgaatcattccgcgtattggttaaagaattacaatcacttggtcttgatatgaaagtc
ctcgatgctgatcgtaatgttcttgacttgcgtgaattggatgaagatgaagtaatgact
cgtccagataatacagaaattactccggaaatgcttgaagctcaagaagcaattgttgca
caagcagaagctgaagaagaagctttgattaacgctgatattgaaaaataa
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