Lactococcus lactis subsp. cremoris NZ9000: LLNZ_00020
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Entry
LLNZ_00020 CDS
T02131
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lln
Lactococcus lactis subsp. cremoris NZ9000
Brite
KEGG Orthology (KO) [BR:
lln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lln03400
]
LLNZ_00020
Enzymes [BR:
lln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LLNZ_00020
DNA repair and recombination proteins [BR:
lln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LLNZ_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
AAA_30
ResIII
AAA_22
KdpD
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADJ59024
LinkDB
All DBs
Position
6062..9673
Genome browser
AA seq
1203 aa
AA seq
DB search
MSEVKLTPEQNEAIHSSGKNILVSASAGSGKTFVMAQRIVEKVKQGIEIDRLFISTFTKK
AASELRMRLERDLKKARQESSDDEEAHRLTLALQNLSNADIGTMDSFTQKLTKANFNRVN
IDPNFRILADQTESDLIRQEVFEQLVESYLSADESLNISKDKFEKLIKNFSKDRNILGFQ
KVVYTIYRFASATENPISWLENQFLKGFETYKSLTDLSEDFTVNVKENLLTFFELLENSL
TNGVIAKKGAGRDKANLILDNKNELLEAISKKDFVTCTALFLSIDTDIRVGSSKDEALSA
LKKDFSAQKQDLVGSKSKPGELRKFVDKIKHGQLIEKYQNQAFEIASDLQKFIIDFYKTY
LERKKNENAFEYSDIAHFAIEILEENPDIRENLREHYDEIMIDEYQDTSHTQERMLELLS
NGHNLFMVGDIKQSIYGFRLADPGLFLEKYKSYDQAENPNQLIRLKENFRSRGEVLNFTN
DIFKHLMDEKLGEMTYGKEEALVQGNISDYPVEAEKDFYPELLLYKENTSEEEIEDSEVK
ISDGEIKGAAQEIKKLIEYGVEPKDIAILVRSKSNNNKIEDILLSYDIPVVLDEGRVDFL
KSMEVLIMLDVLRAIDNPLYDLSLVAMLRSPLFGFNEDELTRISVQGSRDLRFWDKILLS
LKKEGKNPELINLSLEQKLKAFNQKFTEWRKLVNKIPIHRLLWKIYTETYYFDYVGALKN
GEMRQANLQALSVRAESYESSGYKGLFKFVRLINKFMEQNNDLASVNIKLPQNAVRVMTF
HKSKGLEFDYVFLMNLQSRFNDRDLKEDVILSREHGLGMKYIADLKAEPDVITDFPYALV
KMETFPYMVNKDLKQRAALSEEMRVLYVAFTRAKKKLYLVGKIKDTDKKAGLELYDAATL
EGKILSDKFRNSSRGFQHWILALQNATKLPMKLNVYTKDELETEKLEFTSQPDFKKLVEE
SEKFDNIMSFSDEIKEAQKIMNYQYPHQAATELSSIQTPSQVKKRSYEKQLQVGEVQPVS
EFVRVKNLDFSDFGPKKITAAEMGSATHSFMQYADFSQADLFSFQATLDEMGFDEKIKNQ
IDITKILTLFDTEFGQFLSENVDKTVKEAPFSMLRTDEFAKEQYIVRGICDGFVKLADKI
ILFDYKTDRFTNVSAISEIKERYKDQMNLYSEALQKAYHVNQIDKYLILLGGPRKVFVEK
IDD
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtaaaattaactccggaacaaaatgaagccattcatagttcaggtaaaaat
atattagtctcagctagtgctgggtccggaaaaacttttgttatggcgcaaagaattgtt
gaaaaagtcaaacaaggtattgaaattgatcgactttttatttcaactttcactaaaaaa
gcggctagtgagttgcgaatgcgacttgaaagagatttgaaaaaagcgcgtcaagagagt
tctgatgacgaggaagctcacagattgacacttgctttacagaatctttcaaacgcagat
attggaacaatggatagttttactcaaaaattgacaaaagctaattttaaccgtgtaaat
attgatccaaattttcgaatattggctgaccaaacagaaagtgacttgattagacaagaa
gtttttgaacaattggttgagtcttatttatcagctgatgaaagcttaaatatttcaaaa
gataaatttgaaaaattgataaaaaatttctctaaagacaggaatattcttggctttcag
aaggtagtttacaccatttatcgttttgcgtcagcaactgaaaatccaataagttggtta
gaaaatcaatttttaaaaggttttgagacttataaatcactgacagacttatcggaagac
tttacagtgaatgtaaaagaaaatttactgacattttttgagctgttagaaaattcactg
accaatggtgtgattgctaaaaaaggagctggtcgtgataaggcaaatctaattttagat
aataaaaatgaacttttagaagcaataagtaaaaaagattttgtaacttgcacagcatta
tttttatcaatagatactgatattcgcgtcggttcttcaaaagatgaagcactttctgcc
ttaaaaaaagatttttcagctcaaaaacaagatttagtaggttcaaaatcaaaacccgga
gaacttcggaagtttgttgataaaatcaaacatggccaattaattgaaaaatatcaaaat
caagcttttgaaattgccagtgatttacaaaaattcattattgatttttataaaacttat
ctagagcgtaagaaaaatgaaaatgcctttgagtattctgatatcgctcattttgccatt
gaaattttagaagaaaatccagatattcgtgaaaatttacgtgagcattatgatgaaatc
atgattgatgagtatcaggatactagccatacacaagaacgaatgctcgaacttctttct
aatggtcataatctttttatggtaggggatattaaacagtcgatttatggtttccgccta
gctgacccaggtctatttttagaaaaatataaaagttatgatcaagcagaaaatcctaat
caactgattcgcttgaaagaaaattttcgctcacgaggtgaggttttaaatttcacaaat
gacatctttaaacacctaatggatgaaaaattaggtgaaatgacttatggaaaagaagag
gccttagttcaggggaatatttctgattatccagtggaagcggagaaagatttttatcca
gagcttcttttgtataaagagaatacaagcgaggaagaaatagaagactcggaagtaaaa
atttcggatggagaaatcaaaggggcagcacaagaaataaagaaactgattgaatatgga
gttgaaccaaaagatatcgcaattttagtccgttctaaatctaataataataagattgag
gatattctactcagttatgatatcccagttgttcttgacgaaggacgagttgattttttg
aaatcaatggaagttttaatcatgctggatgtcttgagagcaattgataatccactctat
gatttatctttggttgcgatgctgaggtctcctttgtttggttttaatgaagatgaattg
actcgcatcagtgttcaaggaagccgtgaccttcgtttttgggataaaattctcttgtca
ttaaaaaaagaaggaaaaaatcctgaacttataaatttgtcattagaacaaaaattgaaa
gcattcaatcaaaagtttacagagtggcgtaaacttgtcaacaaaattccaattcatcgc
ttactttggaaaatttatacagaaacctattattttgattatgtaggagctttgaaaaat
ggggaaatgcggcaggcaaatttacaagctctctctgttcgagcagaatcctatgaaagt
tccggttacaaaggcttatttaaatttgtaagacttatcaataaatttatggaacaaaat
aatgacctagcttctgtcaatattaaacttcctcaaaatgctgttcgtgtcatgactttt
cataaatctaagggacttgaatttgattatgttttcttgatgaacttacagtctcgtttc
aatgatcgtgacctgaaagaagatgtcattttaagccgcgagcatggtttgggtatgaaa
tatattgcagatttgaaagcagaacctgatgtcattacagattttccttatgccctggta
aaaatggaaacatttccctacatggtaaataaagacttaaaacaaagagccgcactttca
gaggaaatgcgagtgctttatgtcgcttttactcgtgcaaagaaaaaactctatcttgtc
ggaaaaattaaggatacagataaaaaagcaggacttgaactttatgatgctgctactttg
gaaggaaaaattctatctgataagttccgcaactcaagtcgtggttttcaacactggata
ttggctcttcaaaatgctacaaaacttccaatgaaactcaatgtttacacaaaagacgaa
ttagaaactgagaaacttgaatttacaagtcaacctgatttcaaaaaattggtcgaagaa
tcggaaaaatttgataatatcatgtcattttctgatgaaattaaagaagcacagaaaatc
atgaattatcagtatcctcatcaagctgctacagaactttcaagcattcaaacgcccagt
caggtaaaaaaacgcagctacgagaagcagttacaggtaggtgaagttcaaccagtcagt
gagtttgttcgagtaaaaaacttggatttttctgattttggacctaagaaaattactgct
gcagaaatgggttcagcaactcacagctttatgcaatatgctgatttttctcaagccgat
ttatttagttttcaagcaactcttgatgagatgggatttgatgaaaaaataaaaaatcaa
attgatatcactaaaattctaactttatttgatactgaatttggacaatttttatcagag
aatgtggataaaacagtcaaagaagctccattttcaatgttgagaactgatgaatttgcc
aaagaacaatatattgttcgaggaatttgtgatggatttgtgaaacttgctgacaagatt
atattatttgattataaaacggacagatttacaaatgtgtcagcaatttccgaaataaaa
gaacgttataaagatcaaatgaatctttacagtgaggcccttcaaaaagcatatcatgtc
aaccaaattgacaagtacctgattttattaggaggacccagaaaagtttttgttgaaaaa
atagatgactag
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integrated database retrieval system
