Lactococcus lactis subsp. cremoris NZ9000: LLNZ_02500
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Entry
LLNZ_02500 CDS
T02131
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lln
Lactococcus lactis subsp. cremoris NZ9000
Pathway
lln03030
DNA replication
lln03430
Mismatch repair
lln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LLNZ_02500 (dnaE)
03430 Mismatch repair
LLNZ_02500 (dnaE)
03440 Homologous recombination
LLNZ_02500 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lln03032
]
LLNZ_02500 (dnaE)
03400 DNA repair and recombination proteins [BR:
lln03400
]
LLNZ_02500 (dnaE)
Enzymes [BR:
lln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LLNZ_02500 (dnaE)
DNA replication proteins [BR:
lln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LLNZ_02500 (dnaE)
DNA repair and recombination proteins [BR:
lln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LLNZ_02500 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF4351
Ribonuc_2-5A
Motif
Other DBs
NCBI-ProteinID:
ADJ59498
LinkDB
All DBs
Position
475871..479083
Genome browser
AA seq
1070 aa
AA seq
DB search
MFAPLNTKTEYSFLDSVVKLDDYLEGALRLGYKTVGICDVGNLHAAFRFVRKAQMLNLQP
VISIELNFEWRGLPVSFSFIAKNTEGYKNLLRISTFHNYDRRQFSDIQNHLSGIALVIPE
TYGTLSELSELAAFADEAYIGIDQQTDKGTKFNLPTLPFPAVRYLNFADNEILAILHAVR
DGLSFDESLTVSSNELLQRPEAYESYFQKYFPQALTNLSVLTAKIAYQFDEKLELPRFDK
KREAVEHLREEAILGLSARLEEKKSLTEISSVSLASALAEESTTIDLSVYQERLEKELSV
IHQMGFDDYFLIVADLLRYAREQDIYCGMGRGSAAGSLVAYVLGITQVDPVKHNLFFERF
LNPERVAMPDIDIDMPDDRRAELLAYMKNRYGSDHVAQIVTFSTLGKRQALRDVGKAFGM
TEAELSNLTRMLVRRFGTLADEYENNQRFKAEVLKNGKLKRIYEVARRIEGMPRQTSTHA
SGVVLSEESLMNYVSLKPSEDLALTQYEAPDVEAIGLLKIDFLGLRNLTIISRLRDLVKK
RQKIDIDPLKIDLEDETTLALFRAGNTMGIFQFENPQMRRFLRNLAPSKFDDIVDATSIF
RPGPSQFIPQFVARRHGKEIVPVVDDSISEILKPTYGIMIYQEQIMQVAQAFAGFSLGKA
DLLRRAISKKKGSELEKLREDFLISAGELGHSKEKAEEIYDLIERFANYGFNRSHGFAYG
ALAFQIAYFKAHFPDEFYEIQLRDRKREVMILDALDNGFEIEKPNINQMKIGDFVKNKKI
RLGLAHVQGISRDLAKWIVENQSYKNLADFVEKLPNNFHKKESILPLIQIGAFDYADSNR
GKLAYNLADHANLLNYYSDDIFMASSGGGFAYHEAEDYSETEKYDFEKNLLGIGVTPHPL
QSLAQRFSGNFTPIANLVKNRRMTILVEINYIRTHRTKTGQTMAFLTVSDSRENFDVTLF
PEIYRQFSSELEQGKFYLISGKVTERNDELQLVADRMSPALETDKKLWLNLRDEKYNQKI
SQILREFPGSHQVILHYSNLKKTIQTKIYVEESEFLKKRLEGYVIGIVYK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacccttaaatacaaaaacagaatacagttttttagatagtgttgttaaacta
gacgattatttggaaggggctctacgtttaggctataaaacggtcggaatttgtgatgtg
ggaaacctccatgcagcctttcggtttgtcagaaaagctcaaatgcttaatttacaacca
gttattagtattgaattaaattttgaatggcggggtttgccagtttctttttcttttatt
gctaaaaatacagaaggttataaaaacttacttcggatttcaacatttcataattatgat
cgacgtcaattttctgatattcaaaatcatttgtcaggaatcgcactggttattccagaa
acttatgggactttaagtgagctatcagagcttgcagcatttgccgacgaagcctatatt
gggattgaccagcagacagataaaggaactaaatttaatttaccaacccttccttttcca
gcagttcgttatctgaattttgctgataatgaaattttagctattttgcacgcggtgcgt
gatgggctttcctttgacgaaagtttgacggtcagttcaaatgaattgctccaaaggcca
gaagcttatgaatcttattttcagaaatattttccgcaagcactgacaaatctgtcagta
ttaacagcaaaaattgcttatcaatttgatgaaaaattggaacttccgagatttgataag
aaaagggaagcagttgaacatcttcgagaagaagcgattttaggactgtctgctcgactt
gaagaaaaaaaatcactgacagaaatttcgtcagtaagtctggcaagtgctttagctgaa
gaatcaacgacgattgatttgtcagtatatcaggagcgtttagaaaaagagttgtcagtc
attcaccaaatgggatttgatgattattttttgattgtcgcggatttgttgcgctatgcg
cgtgaacaagacatttattgcggaatggggcgtgggtcggctgctgggtctttggttgcc
tatgttttgggaatcactcaggttgaccctgtcaaacataatcttttctttgaacgtttt
ttgaacccagaacgagtggccatgcccgatattgatattgatatgcccgatgaccgtcgt
gctgagttgctggcctatatgaaaaatcgttatggttcagaccatgtagcacaaattgtc
actttttcaactttaggaaaaagacaggcgctcagagatgtcggtaaagcctttgggatg
accgaagctgaattatctaatttgactcggatgcttgttcgccgttttggaactctggct
gatgaatatgaaaataatcaacgttttaaagccgaagtattgaaaaatggaaaattaaaa
cgaatttatgaagtcgccagacgaattgagggaatgcctcgccagacttcaacacatgcc
tcaggtgttgttctttctgaagaatctttgatgaattatgtgtcattaaaaccgtcagaa
gatttagctttgactcaatatgaggcaccagatgtggaagcgatagggcttctaaaaatt
gacttcctgggattacgtaatttaacgatcatttcgagattacgtgatttggtgaaaaaa
cgtcaaaaaattgatattgacccgttaaaaatagatttagaagatgaaacgacattggca
ctttttagagctggaaatacgatgggaatttttcagtttgaaaatccgcaaatgcgacgt
tttctaagaaaccttgcaccaagcaaatttgatgatattgttgatgcaacctcgattttc
cgtcccggtccatcacagtttattccacaatttgttgccagacgtcatggaaaagaaatt
gttccagttgtcgatgattctatcagtgaaatcttaaagccgacttatggaattatgatt
tatcaggaacaaatcatgcaagtggctcaagcttttgccggattttctcttggaaaggct
gaccttcttagacgagcaatctctaagaaaaaagggtccgagttggagaagctgcgcgag
gatttcttaatttctgcaggagaactgggtcattctaaagaaaaagcagaagaaatttat
gacctgattgaacgttttgccaattacggcttcaaccgttcgcatggcttcgcgtatggg
gcgcttgcttttcaaatcgcttattttaaggcacatttccctgatgaattttatgaaata
caattacgtgaccgtaaacgggaagtcatgattttagatgctttggacaatggttttgag
attgaaaaaccaaatattaatcagatgaaaattggtgattttgtaaaaaataaaaaaatt
cgattaggattagctcatgttcaaggaatttcccgtgatttggcaaaatggattgttgaa
aatcaatcatataagaatttggcagattttgttgagaaattacccaataattttcataaa
aaagaaagtattctaccactaatccaaattggtgcttttgattatgctgattctaatcga
ggaaaattggcttataatttggctgaccatgctaacttactaaattattatagtgatgat
atttttatggcaagttctggtggcggttttgcttatcatgaagcagaggattattcagaa
acagaaaaatatgattttgagaaaaatttgttagggattggtgtaacaccccatcctttg
caaagtttggctcagagattttcaggaaatttcacgccaattgctaatcttgtcaaaaat
cgtagaatgacgattttggttgagattaattatattcggacccatcgaacaaaaacaggg
caaacaatggcatttttaactgtgtcagatagtcgtgagaattttgatgttactcttttt
ccagagatttatcgtcaattttcgagtgagcttgagcaaggaaaattctacctgattagt
gggaaagtaaccgaacgtaatgatgaattacagcttgtcgctgaccgaatgagtccagct
ttggaaactgataaaaaactttggttaaatttaagagatgagaaatataatcaaaaaatt
tcgcaaattttacgtgaatttccgggttctcatcaagtgattcttcactattcaaatttg
aaaaaaacgattcaaacaaagatttatgtggaagagtcggagtttttgaaaaaacgattg
gaaggatatgttattggtatagtttataaataa
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