Lactococcus lactis subsp. cremoris NZ9000: LLNZ_09895
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Entry
LLNZ_09895 CDS
T02131
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lln
Lactococcus lactis subsp. cremoris NZ9000
Pathway
lln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LLNZ_09895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lln03400
]
LLNZ_09895
Enzymes [BR:
lln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LLNZ_09895
DNA repair and recombination proteins [BR:
lln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LLNZ_09895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
5_3_exonuc
UvrD_C
HHH
HHH_8
UvrD-helicase
Herpes_Helicase
IMS_HHH
AAA_12
nSTAND3
AAA_28
AAA_16
NPHP3_N
MeaB
AAA_5
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADJ60899
LinkDB
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Position
complement(1902607..1905108)
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AA seq
833 aa
AA seq
DB search
MTDKTYVTGSIEAIFFSNPSNFYKVLLIEIDETNAEYDDFEIVVNGTIGDVVEGDSYTFY
GQLTQHPKYGEQLQVSQYEKAVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDS
ILEAPEKLDGLLTLARKNSFIKRLRENHGMEKVLTKLAEYGLPSKLTFQIYELYKEETIE
KIEGNPYQLVEEVKGVGFKTADKIASELGIEADSPNRFRAALMHEVNTHSQATGDTYIEA
KNLLELTIDLLEEARNIEVNPAEVAAEINGLIVDGKVQQEGTKIFENSLFFAEDGIRKSL
TALTNRSGKDFADEKLLTVLEEVEKDLEITYDELQKQAIIGAMNQQFFILTGGPGTGKTT
IINGFIETYARLYQLDLEPDHYNDDVFPILLAAPTGRASRRMNELTGLPAATIHRHLGLG
QDEAEDAIGNELSGSLLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPSVKLDKIFRQGDDSTITDLAHHIKDGQLPADFTVKKPDRSYFEVSANFV
PQMVEQIASAWQKRGNNPFELQILAPMYKGTAGINAMNILLQNLFNPLNDRLEFALGDMK
FREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQDEIVMDFDGQELTYPRAEWYK
ITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTFLVERFKDDKPAAENLSVDSLTKKVTDKKEISNKEKNSGSAADLDLENFS
GRKKTAPKVEEISLFDEETESLGNGILTEALILSGNFDPLIGLTEQDFAIFNK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgacggataaaacttatgttacaggctcaattgaagctatttttttctctaatccaagc
aatttttataaagttttattaattgagattgatgaaacaaatgctgaatatgatgatttt
gaaattgtggtcaatgggacaattggcgatgtagtcgaaggggattcttatactttttat
gggcaattaacccagcatccaaagtatggggaacaattgcaagtcagtcaatatgagaag
gctgtaccaacgtctggtgctggtttggtcaagtatttttcatcagataaatttccaggg
attggtaaaaaaacggcagagaaaattgttgaaacttttcctgaaaatacggtagattct
attttagaagcgcctgagaaattggatggtttattaactctagccagaaaaaattcattt
atcaaacgtttgcgtgaaaatcatggtatggaaaaagtgctgaccaagcttgcagagtat
ggcttgccaagtaaactcacttttcaaatctatgagttgtacaaagaggaaacgattgaa
aaaattgagggaaatccttatcaacttgtggaagaagttaaaggggttggctttaaaact
gccgataagattgcgagtgaactagggattgaagcggatagtccaaatcgttttcgagcg
gctttgatgcacgaagtcaatacgcattcgcaagcaacaggtgatacctacattgaagcc
aagaatttacttgagttgacgatagacttacttgaagaagccagaaatattgaggtcaat
ccagctgaagttgctgcggaaataaatggtttaattgttgatggaaaagtacagcaagaa
ggaacgaaaatatttgaaaattccttgttttttgctgaagacggtatccgaaaatcactg
acagccttaactaatcgttcgggaaaagattttgctgacgaaaagttactgacagttttg
gaagaggtagaaaaagatttagagattacttatgatgaacttcagaaacaggccatcatt
ggagcgatgaatcagcaatttttcattttgactgggggaccaggaacggggaaaacaacg
attattaatggtttcattgaaacttatgcccgtctttatcagttagatttagaacctgac
cattataatgatgacgtttttcctattttactggcggcaccgactggtcgcgcttcaaga
cggatgaatgagttgactggacttccagcagcaacaattcatcggcacttaggcttaggg
caagatgaggcagaagatgcgattggtaatgagttgtcaggttcacttttgattgtcgat
gaattttcaatggttgatacttggctagccaacaaactttttcaagccattcctggttca
atgaaagtccttctcgttggcgatgctgaccaacttccttctgtgggccctggacaaatt
tttgcagatttattaaaaattccagaaattccatcagtaaaattggataagatttttcgt
cagggagatgattcaacgattaccgatttggctcatcatatcaaagatggacaattacct
gcagattttacggtgaaaaaacctgaccgttcttattttgaagtgagtgctaattttgta
ccacaaatggtggagcaaattgctagtgcttggcaaaaaagaggaaataatccttttgaa
ttacaaattttagcgcccatgtataaagggaccgctgggattaatgcaatgaatattctc
ttgcaaaatctctttaatccgcttaatgaccgacttgaatttgctttgggtgatatgaaa
tttcgtgaaggagataaagtattacatttagtcaatgacgctgaggccaatgtattcaat
ggagatttaggacaaattgttgaattgattgcagcaaaatatactgacagtaaacaagat
gagattgtgatggattttgatggtcaagaattgacctatcccagagctgaatggtataaa
attacgcttgcttatgctatgtctatccataaatcccaaggttcggaattttcaacggtc
atcgtcccgatggtctcttcttattcacggatgttagagcgaaatttactatatacagca
atcacgcgggcaaagcaaagcttaattttattgggtgaagagcgtgcctttgctcaggct
gtggcgcgtgaaggagccaatcgaaaaacttttctcgttgagcgttttaaggatgataag
cctgccgcagaaaatctgtcagtagattccttaactaaaaaagttactgacaagaaggaa
atatctaacaaagagaaaaattctggatcagcagcagacttagacttagaaaatttttct
ggcagaaaaaaaacagcaccaaaagttgaggaaatttcattatttgatgaagaaactgaa
agtttggggaatggaattctaacagaagcgctaattttatctggcaattttgatccctta
attggattgactgagcaagattttgcgatttttaataaataa
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