Lactococcus lactis subsp. cremoris NZ9000: LLNZ_10280
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Entry
LLNZ_10280 CDS
T02131
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lln
Lactococcus lactis subsp. cremoris NZ9000
Pathway
lln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLNZ_10280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lln03019
]
LLNZ_10280
03400 DNA repair and recombination proteins [BR:
lln03400
]
LLNZ_10280
Enzymes [BR:
lln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LLNZ_10280
Messenger RNA biogenesis [BR:
lln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLNZ_10280
DNA repair and recombination proteins [BR:
lln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LLNZ_10280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ADJ60969
LinkDB
All DBs
Position
1980101..1981879
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AA seq
592 aa
AA seq
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MNLEIKLKEIFGYDYFRNGQKQIIEQVLAGQATLGILPTGAGKSICYQLPAVIQSGLTLV
ISPLISLMKDQVDQLNIAGIPATFINSTLEEGESYQRMRQVENGEIKLLFVAPERFSLDY
FNNFLQKLPIDLVAIDEAHCISQWGHDFRPSYVDFAAHLKDLPTRPTVLALTATATPKVA
DDIQSLLSISPSHTIKTGFLRENLRFEVVKGMDKRTFLKNYLKNQESESAGIIYASTRKE
VEEICEWLNHNHFKAVRYHAGLSERERQMNQELFLFDEVPIMVATNAFGMGINKPNVRFV
IHYAIPATIESYYQEAGRAGRDGLESDAILLFSPNDLRIRNFLIEQGEGDEGHKELEYEK
LRQMQAYTSAETCLQRYILQYFGDEGEDCKKCSNCLDERELLDITVDAQKVLSCVVRMGE
RFGKTAVAQVLIGSKNKNIAKWNFEGLSTFGIMKNYSQKTVGELIDFLSAEGYLNVTTGK
FPLLLLSAQGLKVLKGQGKVSRRASLIIESKATVVHHFDEECFASIRSLRLELAKEEGVP
PFMIFSDSALKEMAQVLPDSPSQFLQISGVGPVKLEKYGTLFIDKISEYKKS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaaataaaactaaaagaaatattcggttatgattatttccgaaatggtcaa
aaacaaattattgaacaagtcttagcaggacaagctactcttggcattttgcctactgga
gctggaaaatcaatttgttatcaactaccagccgttatccaatctgggctcacactggta
atctcaccacttatcagtctaatgaaagatcaggttgaccaacttaatatcgctggaatc
ccagcaacttttatcaactctactcttgaagaaggtgaatcttatcaaagaatgcgacaa
gtggaaaatggtgaaattaagcttctttttgttgcgcccgaacgtttttcattagattat
ttcaataatttcttacaaaaacttccaattgacttagttgccatcgatgaagctcattgt
atttcgcaatgggggcatgatttcagacctagttatgtcgattttgcagctcatctcaaa
gatttacctacacggcccaccgtcttagctctcactgctactgcgactccaaaggttgcc
gacgatatccaatccttgctctctatatcccccagccacaccatcaaaactggatttctt
cgagaaaacctccgttttgaagtggttaaagggatggataaaagaacttttcttaaaaat
tatcttaaaaatcaggagagtgagtctgctggaattatctacgccagcacccgtaaagaa
gttgaagaaatttgtgagtggctcaaccataatcattttaaagccgttcgttaccatgct
gggctgagcgagcgagaacgtcaaatgaaccaagagctttttctatttgacgaagtgcca
ataatggttgcaaccaatgcttttgggatgggaattaacaaaccaaatgttcgatttgtg
attcactatgccattcccgcaacaattgaaagttattatcaagaagctggtcgtgcagga
cgtgacggcttagaatcagatgcaattttactcttttctccaaatgatttgcgaattcgt
aattttttgattgaacaaggtgaaggggatgagggacataaagaacttgaatatgaaaag
ctccgtcaaatgcaagcttacacaagtgctgaaacttgcctccaacgctatattctccaa
tattttggtgatgaaggagaagactgtaagaaatgtagtaattgtcttgatgaaagagaa
cttcttgatatcaccgttgatgcccaaaaggttctttcttgcgtggtaagaatgggtgaa
cgttttggtaagacagctgtagcacaagtgttgatcggttctaaaaataaaaatattgcc
aaatggaattttgaaggcctctccacttttggaattatgaaaaattactcccaaaagaca
gtcggagaattaatcgactttttatctgcggagggttatctcaatgttacaactggaaaa
tttcccctccttctcctttcagcccaaggtctaaaagtactcaagggccaagggaaagtc
tctcgaagagcaagcttgattattgaatctaaggcgactgttgttcatcattttgatgaa
gagtgttttgcaagtattcgttcgcttcgactcgaacttgcaaaagaagaaggcgttcct
ccgtttatgattttttctgatagtgcccttaaagaaatggcacaagttcttccagatagc
ccaagccaatttttacaaatttctggtgtaggtccagttaaacttgaaaaatatggcaca
cttttcattgacaaaatatctgaatataaaaaaagctga
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