Lactococcus lactis subsp. cremoris NZ9000: LLNZ_12170
Help
Entry
LLNZ_12170 CDS
T02131
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lln
Lactococcus lactis subsp. cremoris NZ9000
Pathway
lln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LLNZ_12170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lln03021
]
LLNZ_12170
03400 DNA repair and recombination proteins [BR:
lln03400
]
LLNZ_12170
Enzymes [BR:
lln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LLNZ_12170
Transcription machinery [BR:
lln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LLNZ_12170
DNA repair and recombination proteins [BR:
lln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LLNZ_12170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ADJ61323
LinkDB
All DBs
Position
complement(2312160..2313098)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPKITKFDESENYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIQIEGVQ
HEFATIPGVREDVIQIVLAVKGIAIKSYVESEKQIELDVTGPMDVTAGDILTDSDIEIVN
KDHYLFSIAEGHSMRAVMTVKKGYGYVPADENKVDGAPIGTIAVDSIYTPVSKVNYQVEP
ARVGGDSSYDKLTLEITTNGTIVSDEALSLSAKILTDHLNLFVDLSEVAAEAETLVVKDE
VKTERVLDKIIEEMDFSVRTYNGLKRAGINTVADIVEMSEADMIKVKNLGHKSVEEVKVK
LTELGLSLKKRK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaaaaattactaaatttgacgaatcagaaaattacggtaaa
ttcgttgttgaaccacttgaacgtggttatggtacaactttaggtaactctctgcgtcgc
gtccttttgtcatcacttcctggtgctgctgtgacttcaattcaaattgaaggtgttcaa
cacgaattcgcaacaatccctggcgtacgtgaagatgtcatccaaatcgttcttgcggtt
aaaggaattgccatcaaatcatacgttgaatctgaaaaacaaatcgaacttgacgttact
ggtcctatggatgttactgctggtgatatcttaactgatagcgacattgaaattgtcaac
aaagaccattacttgttctctattgctgaaggtcactcaatgcgtgctgtaatgactgtt
aaaaaaggatacggctatgttccggctgacgaaaataaagtcgatggagcgccaattggc
acaattgctgtagactcaatttacacaccagtaagtaaagtaaattatcaagttgaacct
gcccgtgttggtggagattctagctacgataaattaacacttgaaattactacaaacggt
actatcgtttctgacgaagctttgtcactctcagctaaaattttgacagaccacttgaac
ttgttcgttgatctttcagaagttgcagctgaagctgaaacacttgttgttaaagatgaa
gttaaaacagaacgtgtgctcgataaaattattgaagaaatggacttctcagttcgtact
tacaatggtttgaaacgtgcaggtatcaacactgttgctgatattgttgaaatgagcgaa
gctgacatgattaaagtcaaaaacctcggtcacaaatcagtagaagaagtcaaagttaaa
ttgactgaattgggactttcccttaaaaaaagaaaataa
DBGET
integrated database retrieval system
