Legionella longbeachae: LLO_0297
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Entry
LLO_0297 CDS
T01183
Symbol
pnp
Name
(GenBank) Polynucleotide phosphorylase (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
llo
Legionella longbeachae
Pathway
llo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLO_0297 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llo03019
]
LLO_0297 (pnp)
03016 Transfer RNA biogenesis [BR:
llo03016
]
LLO_0297 (pnp)
Enzymes [BR:
llo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LLO_0297 (pnp)
Messenger RNA biogenesis [BR:
llo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LLO_0297 (pnp)
Transfer RNA biogenesis [BR:
llo03016
]
Prokaryotic type
tRNA degradation factors
LLO_0297 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
CBJ10625
Pasteur:
llo0297
UniProt:
D3HP12
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All DBs
Position
333122..335287
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AA seq
721 aa
AA seq
DB search
MAKFTKEIAFGDHTLILETGEVARQADGAVFASMNGTQVLATVVGKKDGGENSGFFPLTV
NYQEKFYAVGKIPGGFNKREGRPTELETLISRLIDRPIRPLFPEGFCNEVQVIATVLSLN
PEVSPDIVAMIASSAALALSGVPFNGPIGAARVGYRDGIYLLNPSRKELEHSKLDLVVAG
TKNAILMVESEAKELSEDIMRGAIMFGHEMMKNVIKAIEELAAQAGKTRWDWSPREVDVN
LQSRVSDMIKHEVEAAYLIKDKQERYQRLAELKDQTITALQAENEELNADVISNIFVELE
SATVRNRILDGEPRIDGRDCKTVRPISIRTKLLERAHGSVLFTRGETQAIVVATLGNERD
AQILDNITGESKDRFMLHYNFPPYSVGETGMIGSPKRREIGHGRLAKRAIMAVLPESNDF
PYVLRVVSEITESNGSSSMATVCGTSLALMDAGVPLKAPVAGVAMGLIKEGDRYAVLTDI
LGDEDHLGDMDFKVAGTEHGITALQMDIKIQGITSAIMEQALDQALEGRMYILGVMNNAL
AEHREELSQHAPRITTMKVAEDKIRTIIGKGGATIKGLIDSTGVSIDIDDTGVVQLFSPD
LQALEEAQKQIKSLIAEIEVGQTYQGKVSKIVDFGAFINLLPGKDGLLHISQICNDRAQK
VDTVLQEGQEIEVFVAGIDKQGRVKLEWKDKPKNEEAVALAEESSSEVASVESPQGSNEE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagtttacaaaagaaatagcatttggtgaccacactcttatattagaaactggt
gaagtagcacgacaagctgatggagcagtttttgccagtatgaatggtacccaagtgtta
gctactgtagttggaaaaaaagacggtggtgaaaacagtggattttttcctttgacagta
aattaccaggaaaaattttacgctgttggaaaaatcccagggggatttaacaaacgcgaa
ggcagacctacagaactcgaaacattaatttccaggctcattgatcgtccaattagacct
ctttttcctgagggtttttgtaacgaagtgcaagtaatcgctacagttctttcattaaat
cctgaagtgtctccagacattgtagcaatgatagcgtcatctgctgctttagctctttcc
ggggttccatttaatgggccaattggcgctgcgcgtgtgggttaccgagatggtatttat
ttattaaacccaagtcgaaaagagttggaacactctaaattagatctagttgttgctgga
actaaaaatgctattttgatggttgaatcagaagctaaagaattaagtgaagacattatg
cgcggagcgatcatgttcggtcatgaaatgatgaagaacgtgattaaagcaatagaagaa
cttgctgcacaagcaggtaagacacgttgggactggagtcctcgtgaagtagacgttaat
ttgcagtcacgtgtgtctgatatgataaaacatgaagttgaagctgcttatcttattaaa
gacaaacaagagcgctatcaacgcttggccgaactaaaagaccaaactattacggcctta
caagcggaaaatgaagagttaaatgccgacgtaataagtaatatatttgtagaactagaa
agcgccacagtgcgaaatcgtatacttgatggtgagccccgtattgatggtcgtgattgt
aaaacagtacggcctatatcgattcgcacaaagctactagaaagagctcatggttctgtt
ttattcacccgcggcgagacccaggctatagttgttgctaccttaggaaatgagagggat
gcgcaaatacttgataacattactggcgaatcaaaagaccgctttatgcttcattacaat
tttcctccttattctgtaggagaaactggtatgattggcagccctaagcgtagagaaatc
ggacatggccgtttagcaaaacgtgcgattatggcagtcctgcctgagtcaaatgacttc
ccctatgtacttagagttgtttcagaaattactgaatcgaatggttcaagttctatggct
acagtttgtggcacaagtttggcacttatggatgctggtgttcctcttaaggcacctgtt
gctggggtagcaatgggtttgatcaaggaaggtgatcgttatgctgttcttacagatata
ttaggagatgaagatcatttaggtgatatggatttcaaagtagccggtactgaacatgga
ataaccgcgttgcaaatggatatcaaaattcagggaatcaccagtgcgattatggaacaa
gctctagatcaagctctagaagggcgtatgtacattcttggtgtaatgaataatgcatta
gcagaacatagagaagagctatcacaacatgctcctagaattactaccatgaaagttgct
gaagataagattcgcacaattatcggtaaaggtggggcaacaatcaaaggtcttattgat
agtactggagtttctatcgatatagatgatacaggtgtcgtgcaattattttcacctgac
ttgcaggccttagaagaagcccaaaagcaaattaaatcgttaatcgctgaaattgaagta
ggtcaaacttaccaaggaaaagtgagtaaaatagttgattttggtgctttcattaatctc
ttaccaggtaaagatggtttgcttcacatttcgcaaatctgtaatgatagagcgcaaaag
gtagacactgttttacaggaagggcaagaaatagaagtttttgttgctggtattgataaa
caaggcagagtaaaacttgagtggaaggacaaaccaaagaatgaagaggcagtggctctc
gcagaagaaagcagtagtgaagtcgcaagtgtagagtctcctcaaggaagtaatgaggaa
gagtag
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