Legionella longbeachae: LLO_0479 Help Entry LLO_0479          CDS       T01183                                  Symbol rpoB Name (GenBank) RNA polymerase B-subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism llo  Legionella longbeachae Pathway llo03020   RNA polymerase Brite KEGG Orthology (KO) [BR:llo00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     LLO_0479 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:llo03021]     LLO_0479 (rpoB)    03400 DNA repair and recombination proteins [BR:llo03400]     LLO_0479 (rpoB) Enzymes [BR:llo01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      LLO_0479 (rpoB) Transcription machinery [BR:llo03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      LLO_0479 (rpoB) DNA repair and recombination proteins [BR:llo03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       LLO_0479 (rpoB) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 DUF6497 Motif Other DBs NCBI-ProteinID:  CBJ10810 Pasteur:  llo0479 UniProt:  D3HPJ6 LinkDB All DBs Position 550477..554583 Genome browser AA seq 1368 aa AA seqDB search MAVAEAKPQYSHAEKKRFRKSFGKQADKMAIPNLLEIQLKSYRDFLQADSKANEHFNTGL HAAFSSVFPIDSFSGNARLEYVGYKLGEPAFDVRECKLRGLTYSAPLRVKIRLVILDKDA SEDPKPIKDIREQDVFMGEIPLMTDVGTFVINGTERVVVSQLHRSPGVIFEHDKGKTHSS GKLLYSARIIPYRGSWLDFEFDPKDCVYVRIDRRRKLPVSILLRALGYETEDILGEFFEM TSCHLKNGEYHIDLIPQRLRGEIASFDILVPGTGELIVEQGRRITARHIKQMEKAQMKDL IVPRDYLIGKTLAKNIIDTLTGELVAQANDEVTEDLLDAMITSGIHEFDMIYTNDLDHGS YISDTVKIDPTSSQLEALVEIYRMMRPGEPPTKEAAEALFKNLFFVEERYDLSAVGRMKF NRRVGRKNDDGPGTLTKEDIMAVIKTLIDIRNGIGMVDDIDHLGNRRVRSVGEMTENQFR VGLVRVERAVKERLSLVESENLMPQDLINAKPVSAAIKEFFGSSQLSQFMDQVNPLSGVT HKRRVSALGPGGLTRERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSLSVYARTNDYG FIETPCRKVIEGRVTDEIEYLSAIEEVDQYIAQSSVALDEDGNILADLVPCRHQNEFSLT TPDKINYMDISPKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRSEKPLVGTGME RIVASDSGVSVVAKRGGVIDLVDASRIVVRVNDDETTAGETGVDIYNLTKYFRSNQDTCI NQRPIVKTGDMIQRGDVLADGPCTDMGELALGQNLLVAFMPWNGYNFEDSILISERIVQD DRFTTIHIEELTCIARDTKLGAEEITADIPNVGESALSSLDESGVVYIGAEVNAGDILVG KVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPSGMNGTVIDVQVFTRDGLEKDARA KSIEEEHLARVRKDLVDERRIREEDIYHRVSNIILDKVATGGPGNLRPGSKVTQEYLQSI TRDKWFDIRLENDTTSQQLEQLSKQLEMLTKEMEKRFNDSRKKIIQGDDLAPGVLKIVKV YLAVKRRIQPGDKMAGRHGNKGVISIVVPVEDMPHMEDGTAVDIVLNPLGVPSRMNIGQV LETHLGLAAKGLGNKISQMLDLKQNATEIRTFLNKIYNHDGIQRVNLDCLNDEELYRLAD NLRAGVPMATPVFDGASEAEIKSMLQLADLSPDGKTVLYDGRTGNRFDNPVTVGYMYMLK LNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVK SDDVGGRTKIYKNIVDGDHRMDPGMPESFNVLLKEIRALGIDIELEHD NT seq 4107 nt NT seq  +upstreamnt  +downstreamnt atggccgttgcagaagctaaacctcaatattcgcatgctgagaaaaaacgatttcgcaaa agctttggtaagcaggccgataaaatggcaataccaaatctgcttgaaattcaattaaaa tcttatagggatttccttcaggccgatagcaaagcaaatgaacactttaatacaggatta catgctgcattttcttcagtgttcccaattgatagtttttctggcaatgcaagacttgaa tatgttggctataagcttggtgaaccagcatttgatgtgcgcgaatgcaaattaagaggc ttaacttattctgcaccattaagggttaaaataagacttgttattcttgataaagatgca agcgaagatcctaagccaatcaaagatattagagaacaagatgtatttatgggtgaaata cctttaatgaccgatgttgggacgtttgtcataaatggcaccgaaagagtagttgtctct caattacatcgttcacctggtgtcatatttgaacatgacaagggtaaaacccattcatct ggaaaattactctattctgcacgaattattccatatagaggctcatggctagattttgag ttcgatcctaaagattgtgtttatgtccgaattgacaggagacgtaaactaccggttagc attttgctacgggcattaggctatgaaacagaagatattctgggcgagttttttgaaatg acaagctgtcatcttaaaaatggcgaatatcatatagatttaattccccaacgcctacga ggcgaaatagcatcttttgatattcttgtgcctggaacaggtgagcttattgttgagcaa ggacgaagaatcactgcgcgtcatattaaacaaatggaaaaggcgcagatgaaagatctc attgtgcctcgagattatttaataggcaaaacgttagcaaaaaatattattgatacctta actggcgagttggttgcacaagcaaatgatgaagtcacagaagatttactcgatgcaatg atcacaagtggtattcatgaatttgatatgatttataccaatgatttagatcatggttct tatatttctgatacagtaaagatcgatccaacttcgagtcaactagaagctcttgtggaa atataccgcatgatgcgtcctggtgagccaccaacaaaggaagctgcagaggcgttattt aaaaatctgttttttgtagaagagcgatatgatctatcagcagtaggtaggatgaagttt aatcgccgtgttggtcgaaagaatgatgatggtccgggaacattgaccaaagaagacata atggcagttatcaagacattaattgacattaggaacggtattggaatggtcgatgatatc gatcatcttggcaaccgtagagttcgtagcgttggtgaaatgactgaaaaccaatttaga gttggtcttgtacgcgttgaaagagcagttaaagagcgattgagtttagttgaatctgaa aatttaatgcctcaagatttaattaatgcaaaaccggtttctgctgcgattaaggaattt tttggttcaagtcagttatctcaatttatggatcaagtaaatccactatcaggtgtaacg cataagcgcagggtatcagctttgggcccaggtggattgactcgagagcgtgctggcttt gaagtccgtgacgtacataccacccactatggacgagtatgtccaattgaaacgccagaa ggcccaaacattggtttgattaactcattatctgtttatgcgcgaacaaatgattatggt tttattgaaactccatgccgaaaagtaattgagggccgtgttacagatgaaattgaatat ttatcagctatcgaagaagtagaccaatatatcgctcaatcaagtgtagctcttgacgag gatggaaatattttagctgatttggttccttgtagacatcaaaatgagttctcactgact actccagataagattaactacatggacatttcgcccaaacagattgtatctgtagcggct tctttgattcccttcctggagcatgacgacgcaaaccgtgctttaatgggatcaaacatg caacgccaggcagttcctacattgcggtcagaaaagccattggtaggtactggtatggag cgcatcgttgcatcagactcaggggtttctgtagtagcaaaacgtggaggagtaatcgat ctagttgatgcttcacgtattgttgtacgtgtgaatgatgatgaaacaacggctggtgaa acaggcgttgatatatataatttaaccaaatattttcgttcaaaccaagatacttgtatc aatcaacgccctattgtaaaaacaggcgacatgattcaaagaggcgatgttttagctgat ggtccctgtaccgatatgggggaacttgctttagggcaaaatttattagttgcatttatg ccatggaatggatacaacttcgaagactctattcttatttctgagcgtattgttcaagat gatcgttttacaactattcacatagaagaactgacatgtattgctcgagatactaaattg ggagcagaggaaataactgcggatatacccaatgtaggtgaatcagcactttctagtttg gatgaatcaggtgttgtatatattggtgcagaagttaatgctggggatatattagtagga aaggtaacacctaaaggtgaaactcaacttaccccggaagaaaaattattaagggctatc tttggcgaaaaagcatctgatgttaaagattcttcattacgagtcccatcaggtatgaat ggtactgtaattgacgtacaagtattcacgcgtgatggattggaaaaggatgcacgtgca aagagcattgaagaagagcatcttgctcgagtacgtaaagatcttgttgatgagcgtcgt attcgtgaggaagatatttatcatcgtgtatcaaatattattcttgacaaggttgctaca ggtggcccaggtaatttgagacctggttcaaaagtaacacaagaatatttacaaagtata actagagacaaatggttcgatattcgtttagaaaatgacacaacaagtcagcaattagaa cagctttccaagcagctggaaatgctgactaaagagatggaaaagcgctttaatgatagc agaaagaaaattattcaaggcgatgatttagctcctggcgtattgaaaatcgttaaggta tatcttgctgttaaacgaagaatccaacctggtgataaaatggctggacgccatggtaac aaaggggttatctctattgttgtaccagtagaagatatgcctcatatggaagatggtaca gctgtagatatcgtattaaatccattaggcgtaccttcgcgtatgaatattggacaggta ttagaaacacatcttggtttagctgctaaaggattaggaaataaaatctctcaaatgttg gatttaaagcagaatgctactgaaattcgaactttcttgaataaaatatataatcacgat ggcatacaaagagtaaatctcgattgcctaaatgatgaagagctgtatcgcttggcagat aatttgcgtgctggcgtgccaatggctactcctgtttttgatggggcctctgaagcagaa ataaaaagcatgctgcaactggccgatctatcacctgatggaaaaactgttttatatgat ggtagaacaggtaatcgatttgataatccggtaacagtcggatacatgtatatgctaaaa ctaaaccatctggttgatgataaaatgcatgctcgctctactggttcctacagcctggta acacaacagccacttggcggtaaagcccagtttggaggacaacgctttggagaaatggaa gtatgggcacttgaagcatatggcgcagcttatacattacaggaaatgttgactgtaaaa tcagatgacgttggaggtagaacaaaaatctacaaaaatatagtcgatggagaccatcgc atggatccgggaatgcctgaatctttcaacgtactattgaaagaaatccgtgctttggga atagatatagaactcgaacacgattaa

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