KEGG   Legionella longbeachae: LLO_1328
Entry
LLO_1328          CDS       T01183                                 
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
llo  Legionella longbeachae
Pathway
llo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:llo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LLO_1328 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llo03019]
    LLO_1328 (rhlE)
Enzymes [BR:llo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LLO_1328 (rhlE)
Messenger RNA biogenesis [BR:llo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LLO_1328 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Flavi_DEAD UvrD-helicase ERCC3_RAD25_C Cas3-like_C_2 AAA_11
Other DBs
NCBI-ProteinID: CBJ11689
Pasteur: llo1328
UniProt: D3HS10
LinkDB
Position
complement(1574364..1575629)
AA seq 421 aa
MSFKSLGLIEPLLQSIDELGYKEPSSIQIQAIPKILSGKDVLASAQTGTGKTASFVLPIL
QMLSTKPRANSNRTRTLILTPTRELASQVHENIIQYGRYLSFRSTVVFGGVKINPQMMKL
RSGVEILVATPGRLLDLYNQRAIQFDQVDTLVLDEADRMLDMGFIHDMKRIINYLPKNRQ
NLMFSATFTDEIRSFVKTILNQPIEIDVTPRNTTVVKIKQTVHPVDKNRKAALLSHLIHR
NKWNQALVFSKTKHGANKLVKQLAEAQIHAAAIHGNKSQSQRTKALNDFKSGELHILVAT
DIAARGIDIDQLPCVVNFDLPQVAEDYVHRIGRTGRAGAIGLAISLVSADEVNQLQSIEK
LIQHKLDRIEIEDFEPQHNVPQTTISSTTRKYSQIKKKTTSPYAKPHKKPLNRGSGNTRS
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagttttaaatctttaggtttaatcgaacccttactccaatctattgatgaattaggc
tataaagagccttcttctattcaaattcaagctattcccaaaatattatcaggtaaagac
gtacttgcttcagctcaaaccggaacaggaaaaactgcaagtttcgtgttacctattttg
caaatgctcagtacaaaacctcgagctaacagcaatagaacgagaactcttattttaact
ccaacacgtgagctggccagtcaagtacatgaaaatatcattcaatatggacgttactta
tcatttcgttcaacagtagtctttggtggagtaaaaattaatcctcaaatgatgaaacta
cgttctggagtagagatattagttgccacaccggggcgtttattggatttatacaatcaa
cgcgccatacaatttgatcaagttgatactctggtgctggatgaagcagatagaatgctc
gatatgggcttcattcatgacatgaaacgtattattaattaccttccgaaaaaccgacaa
aatcttatgttctcggctacttttactgatgaaatccgtagttttgtaaaaaccattctc
aatcagcccatagaaattgatgttacaccacggaatacaaccgtagttaaaataaaacaa
acggtacatccagttgataaaaaccgtaaggcagcattacttagccatctgattcataga
aataaatggaaccaggctttggtattttctaaaacaaaacatggtgcaaataaattggtg
aaacaattagctgaagctcaaatccatgctgctgctatccatggcaataaatcccagtcc
caacgcactaaggctttaaatgattttaaatctggggaattacatattttagtagctaca
gatattgctgctcgaggaattgatattgatcaattgccttgcgtcgttaattttgatttg
ccccaagttgctgaagattacgttcatcgcatcggccgtaccgggcgtgctggtgcaata
ggattagcgatttcactggtaagtgccgatgaagtcaatcaattgcagtcaatagaaaaa
ttgattcaacacaaattagatcgtattgaaatcgaagattttgaaccccaacataatgta
ccccaaaccactatttcctccacaaccaggaaatattctcagataaagaaaaaaacgacc
tcaccttatgctaaaccccataaaaagccattaaacagaggatctggaaatactcgatct
aaataa

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