Legionella longbeachae: LLO_2818
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Entry
LLO_2818 CDS
T01183
Symbol
deaD
Name
(GenBank) putative ATP-dependent RNA helicase deaD (cold-shock DEAD-box protein A)
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
llo
Legionella longbeachae
Pathway
llo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLO_2818 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llo03019
]
LLO_2818 (deaD)
03009 Ribosome biogenesis [BR:
llo03009
]
LLO_2818 (deaD)
Enzymes [BR:
llo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLO_2818 (deaD)
Messenger RNA biogenesis [BR:
llo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLO_2818 (deaD)
Ribosome biogenesis [BR:
llo03009
]
Prokaryotic type
rRNA helicases
LLO_2818 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Helicase_C_2
CMS1
Cas3-like_C_2
NMT1_2
SUa-2TM
adh_short
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CBJ13253
Pasteur:
llo2818
UniProt:
D3HLD4
LinkDB
All DBs
Position
3295741..3297450
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AA seq
569 aa
AA seq
DB search
MSQEITSFAAFNFSDALNRALEDMKFTTPSPIQAQTIPLLLEGRDAIALAQTGTGKTAAF
ALPILQNLSSSVHGTQALILAPTRELAIQVAEQFELLSANQRSITVAVLCGGQEYGRQLK
QLRAGAQIVVGTPGRILDHLDKGTLLLDNLRTFILDEADEMLRMGFIEDIETIMSKLPEK
KQIGLFSATMPHRIRQIANTYLHNPAAIEIRAETATVKSIEQRFLFASGHQKYDALLRVL
AVEDYQGVIVFVRTKSSTEEVAEILQQQGLRAMAIHGDITQALRERIIAQFRQGAIDILV
ATDVAARGLDVERVTHVINYDLPHDNETYVHRIGRTGRAGRSGVAILFVTPKEGRLITSI
ERHTRQRITKVAVPTDHMIHVTRQQRFMANITARLEHEHIISYKRIIEEYIKENDASAVD
VAAALALLLHKDMPWQKEQALPKESRSIKENRPERNGKFERSFSRFDERKSFNSDKKSPK
DNRKKFGDVEQDLFRLDVGKVHGVKPGNIVGAIANEAGLQSKHITGLKILDDHSIVRLPK
GMPKEIMSGLTKAWVCGRQLKLTLISSNA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaatcaccagcttcgctgcctttaatttttctgatgccttaaatagagca
ttagaggatatgaagtttactactccttcaccaattcaagcacaaacgattcctttactg
ttagaaggacgagatgcgattgctcttgcgcaaacaggaacaggtaaaaccgctgcattt
gcattaccaattttgcaaaatttatcctcgtctgtgcacggcacccaggctttaatttta
gcacctacgcgagaattagcgattcaagttgcagagcaattcgaattattaagtgcaaat
caacgcagcatcacagttgcagttttatgtggtggccaggaatatggacgtcaattaaaa
caattacgagctggcgctcagatagtagttgggactccaggacgtattctggatcatctc
gataaaggaactttgcttttagataatttacgtacttttattcttgatgaagcagatgaa
atgttgcgtatggggtttattgaggatattgaaaccatcatgtccaaattacccgaaaaa
aagcaaataggtttattttctgcaactatgcctcatcgcatacgacaaattgcgaatact
tatttacataatcctgcagcgattgaaatacgcgcagaaaccgccactgtcaaaagtatt
gaacaacgcttcctatttgcatcaggacatcaaaagtatgatgcattattacgcgtacta
gcagtggaagactaccagggtgttattgtatttgtgcgaactaaaagcagtaccgaagaa
gtagcagaaatattgcaacaacaaggactgcgcgctatggccatacatggtgatattacc
caagcgttacgtgaacgaattattgctcaattcagacaaggagcaattgatattttggtt
gctacagatgttgccgcacgtggtttagatgtagagcgagtcactcacgtaatcaattat
gacttaccccatgataatgaaacttatgttcatcggattggaagaacaggaagagccggg
cgttctggagttgctatactctttgtaacacctaaggaaggtcgactcattacaagtatc
gagcgacatacccgtcagcgtattactaaggtagctgtgcccacagaccacatgatccat
gtgacacgtcaacaacgtttcatggcaaatattaccgcacgcctggaacatgaacacata
atttcttacaaacggattattgaggagtacatcaaagaaaatgatgcttccgcggtcgat
gttgctgctgcgcttgccttattattgcataaagatatgccatggcaaaaagaacaagct
ttacctaaagaatcacgttcaataaaagaaaaccgtccagaacgtaatggtaaatttgag
cgttcgttttctcgtttcgacgaaagaaaaagttttaattcagataagaaaagccccaaa
gataaccgtaaaaaatttggagacgtagaacaagatttattccgtcttgatgtgggtaaa
gttcatggagttaaaccagggaatattgttggtgctattgctaatgaagcaggtctacaa
agtaagcacattaccggtcttaaaattcttgatgaccattctattgtacgccttcccaaa
ggcatgcctaaagaaatcatgagtggattaaccaaagcctgggtatgtggacgtcagtta
aaattaactttaatcagtagtaatgcttaa
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integrated database retrieval system
