Lineus longissimus (bootlace worm): 135482581 Help Entry 135482581         CDS       T09977                                  Name (RefSeq) 3'-5' RNA helicase YTHDC2-like   KO K20099   ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6] Organism llon  Lineus longissimus (bootlace worm) Brite KEGG Orthology (KO) [BR:llon00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:llon03041]     135482581 Enzymes [BR:llon01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      135482581 Spliceosome [BR:llon03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA helicase-like proteins     135482581 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  YTH HA2_C Helicase_C R3H DEAD OB_NTP_bind Ank_2 HA2_N Ank ATPase AAA_19 AAA_22 nSTAND3 Ank_5 AAA_23 ResIII T2SSE Motif Other DBs NCBI-GeneID:  135482581 NCBI-ProteinID:  XP_064618810 LinkDB All DBs Position 2:10115268..10130829 Genome browser AA seq 1593 aa AA seqDB search MANPFSAAMMMQHSRNLDSPRPSSVGSSQSTYSNSSRSRFPQDVCVGEELKIGVHVALER FRMNEEQKEIEFPSSLTSTERCYIHKVCANLGMKSKSKGKGAGRYITVSKKDGSQIVQAS ASFQLARNSRHQVHTLMQRYPLTNKERMDLMPRTERGQGDSVSKDLTRTTTGRLNNGVPQ VPPRRGDSDLLAFRETLPVMAYKDEITKGICNNKVILISGETGSGKTTQIPQFILDDSTG NNRPCRIICTQPRRISALSIAERVAAERGEKIGQTVGYQIRLESRVSPKTLLTFCTNGVL LRTLMGGDNSLNSVTHVIVDEVHERDRFCDFLLTSLRDIIHRYKHLKLILMSATLNTQLF SNYFNGCPVIAVPGKLYDVKEYFLEDVLKMTSYTNKEMEKYKNELSKVDRQEKQLNDWCS HMTPEQPAEPGNRRKDSNKFPQNSMTEIEEKMMEIGLEREDLEPWLIKEMDDLLTSIFLS GDDDAFNQVIHLIMCENVSVDYMHSETSATPLMIAAGRGFGQIVEQLLCLGANTNIRASN GWSALDWAKKFDRNDVIELLEAYVSASEEPKHAEEQLIKDSHTISPEDRDLLNIYHHSFD DDKVDLDLIMGLLYKIHQGSGEGAVLIFLPGYDEIISLRDKIMMDERCFGDNSRYILFTL HSNMQTTDQKKVFKAVPHGVRKIILSTNIAETSVTINDVVYVIDSGKVKEKSFDALTSVT TLKSIWISRASAQQRKGRAGRCRAGICYHLFSTIRHNTMLEYQDPEILRYPLQELCLHTK MLAPVCCPIADFLSRAPEPPAFLLTRNAVTLLKQIDALDQWEDLTELGHHLTDLPLEPRY GKMILYSVVLKCLDPILTISCTLAYRDPFSIPAQPSQKRAANLARRKFSAGTYSDHMALL RAFQAWQKARADGWERQFCQKNFISGATMEMILGMRTQLLGQLRASGFVRARGCGDIRDL NTNSENWAVVKAALLAGMYPNVIRFDRQRGRLTTLRESKVRPHYRSVIMTSPAKYSEAST LAKALKNLPTDWLFYEEMTRAQRIASVNCCTVVSPITLGIFAGPAKLPMDALKGHRQHHG GSGDGSMGMGGGVSSDSEGEEKDEPCGNSASLTLDDWISFHVDGEAAHLALGLRQKWHSL FMRRMRAPAKPWSQVDEAVIKVVVSVLTNEEQSLGLQQPAGIGQRPRPMSTDGMTPSDSR RGSNEIENQSDDSSHGSNYSGSGKKGGGWRVSTPPKRREFFKSQKSEDRSETSSNRSAAS GQGSNSNSNSGSLRGSASSTPCTSPQPSGSPGKWAESNAHPSRFFVMKCNNHKNLDFSYS RGVWATVSKNEKALNKCLDEGKNVFLIFSVQGSGHFQGYAKLVQPIGKEGKSQDFNQAGL GGNFRIEWIKRANLPFQHCHHLLNPYNNSRRVQISRDGQEIEPTVGEQLIKLWERVPGYQ GRPGEDESQGAEGYDDHRFDKPSTPKYGNKGFKQQWSPDGGHGYGHFQGGYGGYPGGKNM HSPRMSHQMGPHFNPMYVSPVMNPNQLSPSGMRMNPPQSVSPGQGMNPVMILQRGSHSPQ NRHQGPNSSPKPHHHSMTPTSMGYQGGYYHQGN NT seq 4782 nt NT seq  +upstreamnt  +downstreamnt atggcgaaccctttttcggccgccatgatgatgcaacattcgaggaacctggattcccct cggccatcgagtgtggggagttcacagagcacgtacagcaatagcagccgctctaggttt ccacaggatgtctgcgttggggaagagttgaagattggagtccatgttgctctggagaga ttccgcatgaacgaagaacaaaaggagattgagtttccatcatcattgacatcaacagag agatgctacattcacaaagtttgtgcaaatcttgggatgaagtccaaaagcaaaggaaaa ggagctggccggtatataactgtttccaagaaagatggtagtcagattgtccaagcttca gcctcgtttcaactggcaaggaattcacgccaccaagtacataccctgatgcagcggtac cccctgaccaacaaggagagaatggacctaatgccaaggactgaacgagggcaaggagac tcggtttccaaagatctaactcggaccacaactggccgtctcaataacggtgttccacag gtgccacctcggcgtggcgactccgatctgctagcattcagagaaaccctaccagtcatg gcatacaaagatgaaatcactaaaggaatctgcaataacaaagtcatcttgatctccggt gaaacaggatctggaaaaactactcagatacctcagtttatcttagatgatagtacgggg aataacagaccatgtcgcatcatctgcacacagccaaggaggatctccgccttgtcaatt gctgagagagtggctgctgagaggggagagaagattggccagacagttggctatcagatt aggctagaaagcagagtttcacccaagaccctgctgaccttctgtacaaatggtgtactg ttgcggaccttgatgggcggtgacaactctctcaatagtgtgacccacgttattgtggat gaagttcatgaacgagacagattctgtgattttctgctcacgtcactccgagatatcatc caccggtataaacacctcaaattgatattaatgagtgctactctaaatacacagctcttt tcaaattactttaatgggtgtccagttattgcagtcccaggcaagctgtatgatgtcaag gaatacttcctagaagatgtccttaaaatgactagttataccaataaagagatggagaag tacaaaaacgaattgtcgaaggtggaccggcaggagaaacaactgaatgactggtgcagc cacatgacgccagaacaacctgcagagccagggaatcggaggaaggatagtaataaattc ccacagaacagcatgacagagatcgaagaaaagatgatggagattggtttggagagggag gatcttgagccatggttgataaaagagatggacgatctcctcaccagcatcttcttgtct ggggatgatgacgccttcaatcaggtcattcatcttatcatgtgtgagaatgtcagtgtt gattacatgcactcggagaccagcgctactcccctgatgattgcagccggccgtggattt ggacaaatcgttgaacaacttctgtgccttggagcgaacacaaacatcagagcatcgaat ggatggtcagcgcttgactgggcaaagaagtttgatcgcaatgatgtcattgagttactt gaggcctacgtaagcgccagtgaagaaccgaaacatgcagaggaacagctcatcaaagac tcgcataccatcagcccagaagatcgcgacctgttgaacatctatcatcacagttttgac gacgacaaggttgaccttgacctcataatgggtcttttgtacaaaatacaccaaggttca ggagaaggtgctgtcctgatcttcctacccggctatgatgagatcatctccctcagagac aagatcatgatggatgagagatgcttcggtgacaactcgcgctacattctcttcaccctt cactcaaacatgcagaccaccgaccagaagaaagtattcaaggctgtgccgcatggcgtt cgaaaaattatccttagcaccaacatagctgagaccagtgttaccatcaatgatgtggtt tatgtgatagattctggaaaggtgaaagagaaatcattcgatgctctgacgtcagttact acactgaaaagtatttggatatcaagggccagtgcccagcagaggaaaggaagagctggt cgatgtcgtgctgggatttgctaccatctcttcagtacgattcgccacaacaccatgctg gagtaccaagacccagagattctgcgctacccgctgcaagagctttgccttcacaccaaa atgctggcacctgtgtgctgtcctattgctgacttcttgtcccgggctcctgaaccacct gctttcttgttgacgaggaatgctgttacccttctgaagcaaatcgatgcactggaccag tgggaagacctgaccgagcttggacatcacttgacggaccttccccttgagccaagatat ggcaagatgatcttgtattctgttgtcttgaagtgtttggacccaatcctcacgatatcg tgtacgctggcatacagagacccattctccataccagcacagccctcccagaagcgagca gcaaacttggcaaggaggaagttttctgcggggacgtacagtgaccacatggcattgctg agggcatttcaggcatggcagaaggctcgtgctgatggatgggagagacagttctgtcag aagaacttcatatctggtgctaccatggagatgatccttggaatgaggactcagctcctt ggacagctcagggcatcagggtttgttcgtgccaggggttgtggagacatccgtgacctg aataccaactcagagaactgggcagtagtgaaggcagctcttctagccggcatgtacccc aacgtcatccggttcgacagacagagagggcgactcaccacgcttcgcgagagtaaagtg cgcccgcactaccgatctgtgataatgacctccccagccaagtactccgaggccagtacg ctggccaaggcgttgaagaatcttccaaccgactggttattctacgaagaaatgacccga gcgcagagaatagccagtgtgaactgttgcacagtcgtgtcacccatcactctgggtatc tttgccggtccagccaaactaccgatggatgctttgaagggtcatcgacagcatcatggt ggtagtggagatggcagcatgggcatgggaggaggtgtctccagtgattcggagggagaa gagaaggatgagccgtgtggcaactccgcatcactcacattagatgactggatctcgttc catgtggatggagaggctgcacaccttgcccttggcttgagacagaagtggcactcactc ttcatgaggaggatgagagccccggctaagccatggtcacaagtggatgaggctgtcatc aaggtggtggtgagtgtgctcacgaatgaggaacaatcacttggacttcagcagccagct gggatcggtcagagaccaagacctatgtccacagatgggatgaccccctccgacagtcgg cgaggctcaaatgagattgaaaaccagtctgatgattcctcacacggcagcaactatagc ggctcaggcaagaagggcggcggctggagggtttccacaccaccgaagcgaagagaattc ttcaaatcgcagaaatctgaagatcgctccgaaacatcgtccaacagatcagcagcaagt ggccagggttccaacagcaacagtaacagtggtagtctgaggggtagcgcctccagcacc ccttgcacaagcccacagccatcgggctcccctggaaaatgggccgaatccaacgcccat ccctcgaggttctttgtaatgaagtgcaataatcataagaatcttgacttctcctactcg aggggtgtttgggcgaccgtgtcaaagaacgagaaggcccttaacaagtgtcttgatgag ggtaagaatgtgttcctcatattctcagtccagggaagcggccacttccagggctatgcc aagttagtgcagccaatcggtaaggagggcaaatctcaagattttaatcaagccggcttg ggaggaaacttccgaatcgaatggatcaaaagagccaacctgccattccaacattgccat catctactcaatccatacaacaatagcagaagggtgcagatcagcagagatggacaggaa atcgaaccaaccgttggtgaacaactgataaaactttgggagcgagtaccgggctaccag ggcagacctggtgaggatgaaagccagggagcagaaggctatgacgatcacagattcgac aagccctccacccctaaatatggcaataagggcttcaaacagcagtggagcccagacggt ggccacgggtatggtcacttccagggtgggtatggtgggtaccctggtggaaagaacatg cacagtcctcggatgtcacatcagatgggacctcacttcaacccgatgtacgtttcacca gttatgaaccctaatcagttgtctccaagtggtatgaggatgaatccccctcaatcagta tcgccaggacaagggatgaatcccgtcatgatcctacaacgaggcagccactcgcctcaa aacagacaccagggtccgaactcgtcgcctaagccgcatcatcactccatgacaccaact tcaatgggttaccaaggtggatattatcatcaaggaaattaa

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