Lineus longissimus (bootlace worm): 135482680
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Entry
135482680 CDS
T09977
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llon03021
]
135482680
03036 Chromosome and associated proteins [BR:
llon03036
]
135482680
Transcription machinery [BR:
llon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135482680
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135482680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
HHH_3
SPT6_acidic
S1
SH2
Tex_YqgF
HHH_9
Spt6_S1
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
135482680
NCBI-ProteinID:
XP_064619005
LinkDB
All DBs
Position
2:complement(16774239..16824149)
Genome browser
AA seq
1738 aa
AA seq
DB search
MSDFLDSEADESSDEEYPRASKKARIDSDDEEEEEDEDRIAEEMKDLINDDEEEEEGEDE
GDDRSDSGKQKYDSDMDQDLEDEDYELLEENLGYKVKKKPKKLRRIRMISDDDDSGGGSE
KEEEHERDVIANELFEDDEAAESEIGDGEESRIGRPSAKPAPPENEFGDLEDEEESDVDD
FIVDEEGQPISKKGKKKRHIIHTDKALQEAQDIFGVDFDFDDIGDYGEEYDEEEELEDVY
EEEEEGEEGTRPKTKKVRKRPQKKSIFDVFEPSELERGHFTDIDNKIRVADIPERFQLRQ
VPVQATDEGELEEEAEWIYKQAFQTPPLSVQDMEQFETREGGSFEKYSLKGPGTVEKIRE
ALNFMRNQQFEVPFIAFYRKEYVEPELNINDLWRVWHFDEKWTQLRNRKLNLVKLFVKMQ
GWQFDSVLNADPDKPLEAKVRPLTEEDIERAKGVQTMEELNDVYQHFLLYYGREIPLMKN
ALKKKKKRDGATDEEQDDEDDDVHNVMPKQATRKSGYTLCTQSGIDEIARKFGLTPEEFG
ENLRDNYQRHEVDQFPSEPAEVAKEVLSDRFPTVEDALSGARHMVAMQIAHDPLVRQSIR
TIFNERAKISARPTKKGMKEIDESHPCYTFKYLKNKPVKDLQYDQFLKLTMAEEDLIMTY
KIEIDDQSGTNAQTYFDEVKQLYYRDEFSKLVQEWNNQRTQALERALTQILYPQMIKELK
GKLLQEAKDHVLRACTRKLYHWLKVAPYQTDQQLDDDDEYMDSSNGLKVLGIAFSQERDE
AAFCALVDGDGEVTDFLRLIHLMKRRNAYNEDDRKHKEQDMEKLKKFIASKKPHVIAIGA
DCRDAMSVFEDVKRCVSELEDEQQIPSIGVELLDQELAIIFSNTKKSEAEFREYPVFLRR
GISLARRMQDPLVEFSQLCNPDEDILCLKYHPLQEQLNKEELLNALYLEFVNRVNEVGVD
VNRCVAHNHNVALIQFVCGLGPRKGNSLIKTLKQHGRLENRAQLVTVSDMGPKVFINCAG
FIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDTAEDANPAGALEEIL
ESPERLKDLDLDAFAEELERQGYGNKHITLYDIRAELNHRYKDLRVPYRSPTAEERFNLL
TRETPQTFYIGKLVMCTVTGIARKRPLGEQLDQANPVRNDETGLWQCPFCLKKDFPELSE
VWSHFDAGSCPGTAVGVKTRLDNGVTGFIPTKMISDKHVTNPEDRVQVFQTLHCRITKID
IDRFQTDMTCRSSDLADKEGKRKLQKDLYYDIELEEDEKKKEEEKRKQQARQTYIKRVIV
HPSFHNIGYRECEKLMHNMEQGEVVIRPSSKGSDHLTVTWKVTDGISQHIDVLEEGKENA
FSLGKTLIVNNEEFEDLDEIIARYIQPMAAHARDIINYKYFVESASGEKDEMDRMCKEEK
KAGTHKIPYFVSASKAFPGKFLISYLPRVKTRHEFISVTPSGFKYRNQNFHSIGSLIRWF
KDHFRDPIPGTPGGAQRTPLGMSTNIGATPNLHGLDAATIQRAAAGLPSSVFNSLAQVAG
ATPQQFQNAGNFSGGFGGGFNYNPMQTPMGVTPMMTPSYHQGMTPSGRHQVTPAITPGRV
TTPQYQPTPRSGWNAGGLTPRTSSGLTPRTSSGMTPRATPGQRTPSGQRQQQVPPLGPNT
DWAKAAQMWAKKKQEQSGGRATPRGTPRITTPRIQPSPRVQQSPMVGEGGDTPLFDER
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttctggacagtgaggctgatgaatcctctgatgaagaatacccacgggca
tccaagaaggcacgcattgatagtgatgatgaagaagaggaagaagatgaggacaggatt
gctgaggagatgaaggacctcatcaatgatgatgaggaggaggaagagggagaagatgag
ggcgatgatcgcagtgattccggcaaacagaaatatgattcggacatggatcaggatcta
gaagatgaagattatgaacttctggaggagaacttgggctacaaagtcaagaaaaagcct
aaaaagctccggcgtatccggatgatatctgatgatgatgactcgggtggcggctcagaa
aaagaagaggaacatgaacgggatgtgattgcaaacgaattgtttgaagatgacgaagct
gcagaaagtgagatcggtgatggagaagagtcgagaattggacgtcccagtgctaaaccg
gcgcctcctgagaatgagtttggtgaccttgaagatgaggaggaatcagatgttgatgac
ttcattgtcgatgaggaaggtcagccaataagtaaaaaaggcaagaagaagcgtcacata
attcatacagacaaagcactgcaagaagcccaggatatctttggtgttgatttcgatttt
gacgatataggcgattatggtgaagaatatgatgaagaagaggaactggaagatgtgtat
gaagaagaagaagagggtgaagaaggaacccggcctaaaacaaagaaagttaggaaacgt
ccacagaagaaaagtatctttgatgtctttgagccaagtgagctcgagcgtggtcacttc
accgacattgacaacaagatccgtgtggctgatatccctgagaggttccagctgcgtcag
gtgcctgtccaggccactgatgagggcgaactggaagaagaggcagagtggatctacaag
caggcttttcaaactcctccattgtcagtccaggacatggagcagttcgagacgagggag
ggtggctcctttgagaagtacagcctgaaaggccctggcacggtcgagaagatcagggaa
gccttgaacttcatgcgcaaccagcagtttgaggtgccgtttattgccttttataggaag
gagtatgtcgagccagagctgaatatcaatgatctgtggcgagtgtggcattttgatgaa
aagtggacccaacttcggaaccgcaaactgaacctggtgaagttatttgtgaagatgcag
ggatggcagtttgactcggtgctaaacgccgacccagacaaaccacttgaggccaaagtt
agaccccttactgaagaagacattgaaagggcaaagggtgtacagaccatggaagagtta
aacgacgtctaccaacatttcctgctctattatggtcgcgagatcccgctgatgaagaac
gccttgaagaagaagaagaagcgtgatggagcgacagacgaggagcaggatgatgaggat
gatgacgttcataatgtcatgccgaaacaggcaacgaggaagtcgggctacactttgtgt
acacagtctggcattgatgaaatagcgagaaagtttggtctgacccctgaggaatttggg
gagaatttgcgtgacaactaccagcgacatgaagtggatcagttcccatcagaaccggca
gaagttgctaaagaagttttgtcagaccgattcccaactgtagaggacgcattgagtggt
gcacgtcacatggtcgccatgcaaattgcacacgatcctctagtccggcagagcatccgc
accattttcaacgagagagcaaagatcagtgctcggcctactaagaagggcatgaaggaa
attgacgagtcacatccgtgctacacgttcaaatatttgaagaataaacctgtgaaagat
ttgcagtatgatcagtttctcaaactcactatggctgaagaagacctaatcatgacctac
aaaatagaaattgatgatcagtcgggcacaaatgcacagacgtactttgatgaagtgaaa
cagctgtactacagagatgagttcagtaagcttgtgcaggaatggaacaaccagagaacc
caagcattggagagggcgctcacacagattctttacccgcagatgatcaaagaactgaag
ggcaagctgctgcaggaggctaaggatcatgtgctcagggcttgtacccgtaaactgtat
cactggttgaaggtggccccctatcagaccgatcagcaattagatgacgacgatgaatac
atggacagttccaacggcctgaaagtcttgggtattgcttttagccaagaaagggatgag
gctgctttctgtgccctagtggatggagacggagaggtgacagacttcctcaggctgatc
catctaatgaagaggagaaatgcatacaacgaggatgacaggaagcataaggagcaagat
atggaaaaactaaagaagttcatagcttcaaaaaaaccacatgttatagccattggtgct
gattgccgagatgctatgtctgtgttcgaggatgtcaagagatgcgtgtcggagttggaa
gacgaacaacagattccatcgattggggtggagctgcttgatcaggaacttgcaatcatt
ttctcaaatactaagaagtcggaggctgaattccgcgaataccctgttttcctgagaaga
ggtatctcgctggcgcgtaggatgcaggatcctctcgttgagttctctcagctttgtaat
cctgatgaagatattctctgcctcaaatatcacccacttcaggaacaactcaataaagaa
gagctcctcaacgccctctaccttgaattcgtgaaccgtgtaaacgaagtcggcgtagat
gtcaaccgatgtgtcgcgcataaccacaacgtggccctgatacagtttgtttgcggtctt
gggccaaggaagggcaacagcttaatcaaaacgctcaagcagcatgggcgtcttgagaat
cgtgctcagcttgttacggtcagtgacatggggccaaaagtgttcatcaactgcgctggg
tttatcaagattgacacaaactcacttggagacagtacggaggcgtacgtggaggttttg
gatggttcccgtgtccatcctgagacctacgagtgggcgcggaagatggcagtagatgcc
cttgagtatgatgatacagcagaggatgccaatcctgcaggagccctggaggaaatcctg
gagagcccagagagattgaaagatctcgacttggatgcctttgctgaggagttggagaga
cagggctacggcaacaaacacatcacgctgtacgacattcgagccgagttgaaccaccgt
tacaaagatctgagagtgccatatcgatcacctacagctgaggaaagattcaatctactc
accagggagacaccacaaacattctatatcgggaaactagtcatgtgtacagtgacaggc
atagccaggaagcgaccactaggggagcaactcgaccaggccaaccctgtaaggaatgat
gagacaggcctgtggcagtgtccattctgtcttaagaaagatttccctgagcttagcgag
gtttggagccattttgatgctgggagttgcccaggaacagcagttggcgtcaagacaagg
ctggacaacggtgtaaccgggttcattccgacaaagatgatcagtgataaacatgtgaca
aatcccgaagacagagtccaggtgttccagacattacattgccgcatcactaaaattgac
attgatcgattccaaactgacatgacatgtagatcttcagatcttgctgataaggaagga
aagaggaaactacagaaagatctctactatgatattgaacttgaagaggacgaaaagaag
aaagaggaagaaaagaggaaacaacaagccaggcagacatacatcaagcgtgtaattgtt
catccgtcattccacaatattggctatcgggaatgtgagaaactcatgcacaatatggaa
cagggtgaggtggtcatcaggccaagcagcaagggatcagatcacttgactgtgacgtgg
aaggtgacagacggtatctcacagcacattgacgttcttgaagaaggcaaggagaatgcg
ttcagtttgggaaaaactttgattgtaaataacgaggaattcgaagatctggacgaaatc
attgcgagatatatccagccaatggcagctcatgcacgagatatcataaattataaatat
tttgtggaatcggccagtggcgaaaaggatgaaatggacaggatgtgtaaagaggagaaa
aaagctggaactcacaagattccatacttcgtcagtgcaagcaaggctttccctggcaaa
ttcctcatctcgtatttaccacgtgtgaaaactcgtcacgaattcatctcggtcacaccc
agtggtttcaagtaccggaaccagaacttccattccatcggctcgctcatacggtggttc
aaggatcacttcagagatcccattccaggtacccctggtggtgcacaacgtactcccctt
ggaatgtccacaaatattggtgctacacccaaccttcacggtcttgatgccgccaccatt
cagcgggctgcagcaggtctgccaagcagtgtgttcaactcgttggcccaggtggccggc
gccacgcctcaacaattccagaatgctggcaacttcagtggaggattcggtggtggattc
aattacaacccgatgcagactccaatgggtgtcacaccaatgatgaccccatcctatcat
cagggcatgacccctagtggccgacaccaagtcaccccggcaatcacaccaggacgtgta
acaactccacaataccagccgacaccacgatcaggctggaatgctggtggccttacccct
cgaacatcaagtggtcttacacctcgcacctcaagcgggatgactccccgtgctacacca
ggacagcggacaccatcaggacagcgacaacaacaggtcccaccccttggacccaacact
gattgggccaaagcggcacagatgtgggcaaaaaagaaacaagaacaatctggtgggagg
gcaacacctcggggtactcctcggattactaccccacgtattcaaccaagcccaagggtg
caacagagcccgatggttggcgagggaggtgacacaccactgtttgatgagagatag
DBGET
integrated database retrieval system
