Lineus longissimus (bootlace worm): 135483543
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Entry
135483543 CDS
T09977
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135483543
09122 Translation
03013 Nucleocytoplasmic transport
135483543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135483543
03041 Spliceosome [BR:
llon03041
]
135483543
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135483543
Spliceosome [BR:
llon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135483543
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
IDM_N
Motif
Other DBs
NCBI-GeneID:
135483543
NCBI-ProteinID:
XP_064620583
LinkDB
All DBs
Position
2:3951686..3958589
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AA seq
693 aa
AA seq
DB search
MSTVSATSKDPKRRRTIKADVASSETKRSKVSILDSHQAKSRSSAHHFHAEEEEAASRDP
IKDVDLYKHTCKEVSKTFAEICELKKTEGKEDAVTNKRIHGSLQFIALRKLNRLSHLRCK
KVRDATNEAKQKIDLYHLQLQNLLYEAMHLEKEITKCLEFKSKDEEIELVDVDTFYKEAP
KEISKPAITKKDTHIQTLARLDWELEQRKKLAQKLKDTQDSKEVISIDIKSKQEYLESLQ
PKLNAILEASTPVQDYLGLPFDKIQEQHKTAHFLPAPLYVLYMQSSGYKEACDKKLSVTI
EGSLNDAKAFHDAPSDAEDESDSDQEESEKKRKKHRRRTTTTDKVSDKKMKLLRKHPLSV
LMKLEFKDGIVLNLRYFYLTSLHIVAVKACMAMEKNTVGSVVGGDLLQPDILLECLYPGD
RGEETPNPANRFQMKRIGIESFQSEIETAGRPYIWAQWLAGLQFLSNVTEVKAQSSVSSS
RMDEIIKQLRRRVQTKMVLQKHISAIENGTISVSKQYQKLFPVKIHSKVTSWTRETFLEY
KMLPQTKSLIDTGMVEERDMFFTAMIERGSARLKADIVLSPDYPYQSPIFALSLEWQSQR
NNTNDENIRAMEAEVNLHYDELMPGGKPHAELLTNQLQRLCMCLDIFLESESSYSTTAPV
EFSKEKMMPRIGRGPGRAKALRFIPQMGFFAQR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgtatctgcaacttccaaagaccctaaaagacgtcgtacaataaaagctgat
gtggccagtagtgaaacaaagcgatccaaagtttccattcttgattctcatcaggcaaaa
tctcggtcaagtgcccatcatttccatgcagaggaagaggaagcagcctcaagagatccc
atcaaggatgttgatctatacaaacacacttgcaaggaagtcagcaaaacatttgcagaa
atatgcgagctcaagaaaactgagggaaaagaggatgctgtcaccaacaagcgaatccat
ggatctctccagttcatagccttgaggaaactgaatcgcctctcccacctgcgctgcaag
aaagtacgagatgcgactaatgaggccaagcagaagattgatctgtatcaccttcagctt
cagaaccttttgtatgaagctatgcatttggagaaggagatcacgaaatgtttagaattc
aagtcaaaggatgaagaaattgagttggtagatgttgatactttttacaaagaagctcca
aaagaaatatcaaagccagcgataaccaagaaggatacccatattcagacattggcgagg
ttggattgggagctagaacagagaaaaaaattggctcagaagttgaaggatacacaagac
agtaaggaagttatctcaatagatatcaaatcaaagcaagaatatctggagagcctgcag
cctaagctaaatgctattcttgaggcaagtacaccagtgcaagattacctagggctgccc
tttgacaagatccaagaacagcataagacagctcactttctcccagctcctctttatgtg
ctctatatgcagagttcaggctacaaggaagcttgtgataaaaaactgtctgtaacaatt
gaaggcagtttgaacgatgccaaggcttttcatgatgctccgtcagatgctgaagatgaa
agtgacagtgatcaagaggagtcggagaaaaaaaggaagaagcacaggcgccgtaccaca
acgacagacaaagtatcagataagaagatgaagcttttgaggaaacatcctttatccgtg
ctgatgaagttggaatttaaagatggcatcgtgctaaaccttagatatttctacctgacc
agcctgcatattgtggctgtgaaggcgtgcatggctatggagaagaatactgttggatct
gtggttggaggagacctactgcagcctgatatactccttgagtgtctgtatccaggtgac
cgaggggaagagacgcctaaccccgctaatcgtttccaaatgaagaggatcggcattgaa
tccttccagtccgaaattgagacggctggtcgaccttacatttgggcgcagtggctagcc
ggtctccagttcttgtctaatgtcacagaggtaaaggcacaatcgtccgtcagctcgagc
cgaatggatgagatcataaaacagttacgacggagagtgcaaaccaagatggtgctgcag
aagcatatttctgccatagagaatggtacgatatctgtgtccaagcagtaccagaagttg
ttccctgtcaagatccattccaaagtcacatcgtggacaagggagacattccttgaatac
aagatgcttcctcagaccaagagtttgatagacactggtatggttgaggaaagagacatg
ttcttcactgcaatgatcgaaagaggatctgccaggctgaaggctgatattgtcctaagt
cctgactacccataccagtctccgatctttgccttgtccctagagtggcagtcacagaga
aacaatacaaatgatgagaatattagggcaatggaggccgaggtaaatcttcactacgat
gagctgatgccaggaggcaagccccatgcagagctactaaccaaccagttgcagagactg
tgcatgtgcttggacatcttcctggagtctgaatcctcttacagcacaacagcaccggtt
gagttctcaaaggagaagatgatgcctaggattggacgtggtccaggaagggctaaagct
ttacggtttatccctcagatgggtttctttgcacagcgatga
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integrated database retrieval system
