Lineus longissimus (bootlace worm): 135484493
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Entry
135484493 CDS
T09977
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135484493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llon03009
]
135484493
Ribosome biogenesis [BR:
llon03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135484493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Utp12
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40
Beta-prop_WDR3_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Beta-prop_ACSF4
UTP15_C
Beta-prop_IFT122_1st
NBCH_WD40
DUF6449
Beta-prop_DCAF4
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
135484493
NCBI-ProteinID:
XP_064622092
LinkDB
All DBs
Position
3:27210427..27217588
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AA seq
640 aa
AA seq
DB search
MANPIPNSPLSFSSSGEYLAHSSPDGTLKLWQTSTATLSQEYTPSSHLSATCTCINWGPW
RDAKNTPKKKKRRKSGAGESLQLVALGTQSGDVLLYSVAKGDLQSQMTDGHSDRVNDISW
CQDGYKIFTCSSDRHIVEWDVLTGKIKNKWKGDKAEVYSLCLCPGDMYLLSASRSIKLWD
LQKREVLKTFTGHATEVFRLLLASTSQEFSLRNSYVMSAAVNDRLLHAWNLDPSAKDKSA
LASFALPEEPVSMSISRYQESDKAMLLASVTQNGHLLVFEHVLNGKCKKSLQPKVSIQIA
TPGCKDDVPRPIPILAVHISCDNLRSLVMVYGNFLKPSIEKLEYGSLEQEVCLVRDDPSQ
TIVRQESEVTKIKTPDTSREVMQLAPGHMAPSQPTMTGSKKKRRKSNEMSMEDRLNAMGF
DQSSDQAAPAATHPPQADTLATLLTQGLQSQDKLIINNVLQTNNEKIIKNTVRRLPVPVV
IPLVKELSRRMHGHAQVGHVLIKWVKMVLTIHTSYLMTFPEIVDTLSSLYQMMDYRVGMF
SRLSKLQGKLELMLSQVTSQTQDEEETVATQQPMLIYQEESSDEEMDMDDVLQSHSESED
NWEDLSDMEVNEAQEESDEALESDEAENGAEMQESESDSD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacccgattccgaattcgccgctctccttttcgtcttcgggcgaatatttggcc
cattctagccctgatgggactctaaaactgtggcagacatccacagcaactctttcacaa
gaatacacaccaagttcacacttgtcagccacatgcacgtgcataaattggggtccgtgg
agggatgcaaaaaatacccctaagaagaagaagagacggaagtctggtgctggtgagagt
ctacaactggtcgctctggggacacagtctggagatgtgctcttatacagtgttgcaaaa
ggagatcttcaaagtcaaatgacggatggccacagtgacagagtgaacgatatatcttgg
tgccaggatggttataaaatatttacttgttcaagtgaccggcatattgtggagtgggat
gttttaactggaaaaataaaaaacaaatggaaaggggataaagcagaggtgtattccctt
tgtttatgtcctggagacatgtacttattgtcagcaagtcggtcaataaaactctgggac
ttacaaaaaagagaagttctaaaaacatttacaggccatgccactgaagtgttccggtta
ctcctggcatcaacaagccaggagttctctcttagaaattcatatgtaatgtctgctgct
gtcaatgatcgcctcttgcatgcctggaacctcgatccatctgctaaagacaaaagtgct
ttagcatcatttgcactcccagaagagccagtatcgatgagtatctcgagataccaagag
tctgataaagccatgctgttggcgtcggttactcagaatggtcacttactggtgttcgaa
catgtgctaaacggaaaatgtaagaagtccctccagcctaaagtctcaatccagattgcc
accccaggttgtaaggatgatgtgcctcgtccgataccaatcctcgctgtgcatatctct
tgtgataaccttaggagtcttgttatggtatatggaaacttcctcaaaccttctattgaa
aaactggagtatggcagtttggaacaggaggtgtgtttggtgagagacgacccctcacaa
actatcgtgaggcaggagagtgaagttactaaaatcaagacgccagatacatcaagggaa
gtgatgcaacttgcaccaggtcacatggcccccagccaacccacgatgactggttcgaag
aagaagaggaggaagtccaatgagatgtcgatggaagatcgattgaatgcgatgggattt
gaccagtcatcagaccaagcagcaccagcagccactcatccaccacaggcggacacgttg
gccacactgctaactcaaggattacagagtcaggataaacttatcatcaataatgtgctg
caaactaacaatgagaaaatcatcaaaaacacagtaaggcgtctgcctgttcctgtggtt
attccattggtgaaagagttgtcacggcggatgcatggacatgctcaagttggccatgtg
ttaatcaaatgggtgaagatggtgctgacaatccatacatcttatctcatgacgtttcct
gagattgtggataccctcagcagcctctaccagatgatggactaccgagtaggcatgttc
agcagattgtcaaaactgcaaggaaaattggagctgatgctctcgcaggtgactagccaa
acacaggacgaagaagaaaccgtggcgacacagcagccgatgttgatctatcaggaagag
tcttccgatgaggaaatggatatggatgatgtgttacaaagtcattcagagtctgaggat
aactgggaagacctatcggacatggaggtcaatgaagcacaggaggaaagcgatgaggca
ctggaaagtgatgaagcagagaacggtgctgagatgcaggaaagcgagtcagattctgat
tga
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