Lineus longissimus (bootlace worm): 135484520
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Entry
135484520 CDS
T09977
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04120
Ubiquitin mediated proteolysis
llon04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135484520
04120 Ubiquitin mediated proteolysis
135484520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llon04121
]
135484520
Enzymes [BR:
llon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135484520
Ubiquitin system [BR:
llon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135484520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_16
zf-C3HC4_2
zf-C3HC4_3
zf-HC5HC2H
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H_2
FAR1_N
PHD_NSD
zf-RING_Vps41
FANCL_C
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
135484520
NCBI-ProteinID:
XP_064622155
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All DBs
Position
3:complement(27698224..27705499)
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AA seq
598 aa
AA seq
DB search
METRKMRALGVLITMGSFALTGLVVGNAYFQKKQFYPSVVYITKSNPSMAVLYIQAFVFV
ILFAKLMRKVFFGQLRAAEMEHLIERSWYAITETCLAFTVFRDDFSTRFVAMFTLLLFLK
CFHWLAEDRVDYMESSPMISWLFHLRALGLLGILGALDMYFVNHAYYSTLMKGASVQLVF
GFEYAILLTVMMTILVKYILHSIDLQSEHPWENKAVYLLYTELVMGFIKVILYSAFMVIM
IKVHTFPLFAIRPMYLTLRSFKKALNDVIMSRRAIRNMNSLYPDATPEELQSGDNVCIIC
REEMTTNCKKLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRTPRPQTDQAQQQQPQQPQQ
PPQANVFPGFMGMGFPNFPHLPHGFHPHHPQMPQAPPPSSTAASGTGSTPSSTTTQVPPS
APSSTMPGTMPFFMPPFFNPMPFSIPPPMPPPNFQGLTHAELQMMEGQERQHVEARIQCL
RNIQTLLDAAVIQMQQYSSLVNNMGMQPNLYNAPGSATTLTTSSPSADGSIPATQTTSQN
PDTDVENLNFGNLQGAEGVTLPAENTPAEEEDSELSEIRRRRLDRFSVPGTAEDEQEC
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccagaaagatgcgagctttgggtgtcctgataaccatgggcagctttgccctc
acaggactggttgttggtaatgcctacttccagaagaaacagttctacccatccgttgtt
tatataacaaagtcaaatccgagcatggcggtgttatatatccaggcatttgtgtttgtt
atattgtttgcaaagctgatgaggaaagtgttcttcggccagctcagggctgcagaaatg
gagcacctgattgagcggtcctggtatgctataacagagacatgtttagcatttactgtt
ttccgggatgacttcagcacaagatttgtagcaatgtttactttgttactcttcctgaag
tgtttccattggcttgcagaggatagagtagattatatggagagcagtcctatgatatcg
tggttgtttcacctacgagctcttggtctccttgggatcctcggtgctttggacatgtac
tttgtgaaccatgcctactacagtacactcatgaagggtgcatcagtacagttggtgttt
ggttttgagtatgccatcctcctgacagtgatgatgaccatccttgtgaagtacatcctg
cacagcatcgaccttcagagtgagcacccctgggagaacaaggctgtatacttgctctac
actgagctggtcatgggatttatcaaggtcatcctatattcagctttcatggtcatcatg
atcaaggtgcatactttcccactcttcgcaatcaggccgatgtacttaacattaaggagt
ttcaagaaggcactgaacgatgtgattatgtcacggcgagcaatcaggaatatgaacagt
ctttatccggatgctacgcctgaagaactccagtctggggataatgtgtgtatcatttgc
cgtgaggagatgacaaccaactgtaaaaagctgccctgtaatcatatcttccacacgagc
tgcttgcgatcatggttccagcgtcaacagacatgccccacttgccgtatggatgtactg
cgcacacctcgtccccagacagatcaagcccagcagcagcaacctcagcaaccacagcaa
cctccacaagcgaatgtattcccaggttttatgggaatgggctttcccaatttccctcat
ctccctcatgggttccaccctcatcatcctcagatgcctcaagcaccccctccatcatcg
acagctgccagtgggactggctctaccccctcatcaacgacgacccaggtgcccccatca
gctccctcatcaacaatgcctggaactatgccgttctttatgcctccattcttcaatccc
atgccattctctatccctcctcccatgcctcctccaaactttcaaggcctgacacatgcc
gagctccagatgatggagggccaagagaggcagcatgtcgaagcaagaatccaatgtttg
cgaaatattcaaacgttattggatgcagctgtgatacaaatgcaacagtatagttcatta
gtcaataatatggggatgcaacctaatttatataacgctccgggcagtgcaacgacattg
acaacatcctccccatctgcagacggctccattcctgccacacaaacaacttctcaaaac
ccagatactgatgttgaaaacttaaattttgggaatttgcaaggtgctgaaggagtgaca
ttgccggctgaaaatactcccgctgaggaagaagatagcgaactgagtgaaataagacga
cggcgcttagatcgattctctgtaccaggtacagcggaagatgaacaggagtgttga
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