KEGG   Lineus longissimus (bootlace worm): 135484708
Entry
135484708         CDS       T09977                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
llon  Lineus longissimus (bootlace worm)
Pathway
llon03020  RNA polymerase
llon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:llon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135484708
  09124 Replication and repair
   03420 Nucleotide excision repair
    135484708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llon03021]
    135484708
   03019 Messenger RNA biogenesis [BR:llon03019]
    135484708
   03400 DNA repair and recombination proteins [BR:llon03400]
    135484708
Transcription machinery [BR:llon03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     135484708
Messenger RNA biogenesis [BR:llon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135484708
DNA repair and recombination proteins [BR:llon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135484708
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 135484708
NCBI-ProteinID: XP_064622422
LinkDB
Position
3:complement(7821874..7825617)
AA seq 172 aa
MFYHVSLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGYIQ
PGRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLSCFISKHSIPPDMEFD
PNSNPPCYKTKDEDVVIQQDDEIRLKIVGTRVDASDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccacgtttcactggagcatgaaattctcctccatcccagatattttggacca
aatttactgaacacagtaaagcaaaagttgttcacagaagtggaagggacgtgcactggg
aaatatggtttcgtcatagcagtaactacgattgataacatcggtgccggctatatacag
ccaggtcgaggctttgtggtgtatccagtcaaatataaagccatagtgttcagaccattc
aagggtgaggtgcttgacgctgttgtcacacaggtcaataaagtgggactcttcacagag
attggaccgctctcttgtttcatttcaaaacatagcattccaccagatatggagttcgat
cctaattccaatccaccgtgttataaaacaaaagatgaggatgttgtcattcaacaagac
gatgaaatcagacttaaaattgttggaaccagagtggatgcatcagatatttttgccatt
ggatcgcttatggacgactaccttggtctggtcagttga

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