KEGG   Lineus longissimus (bootlace worm): 135484824
Entry
135484824         CDS       T09977                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
llon  Lineus longissimus (bootlace worm)
Pathway
llon03013  Nucleocytoplasmic transport
llon03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:llon00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    135484824
   03015 mRNA surveillance pathway
    135484824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llon03019]
    135484824
   03041 Spliceosome [BR:llon03041]
    135484824
Messenger RNA biogenesis [BR:llon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     135484824
Spliceosome [BR:llon03041]
 Complex C
  Other components
   EJC/TREX
    135484824
SSDB
Motif
Pfam: Pinin_SDK_memA Pinin_SDK_N RSB_motif
Other DBs
NCBI-GeneID: 135484824
NCBI-ProteinID: XP_064622582
LinkDB
Position
3:17508675..17517361
AA seq 496 aa
MATTVRGIDLLQEQLKKAREHLKDVDENIKKITGRSPDDFSRPGQRRISIGRGGDDTGDR
GRGRLFNVSRRGIPDDAPSAKRRAVGNAFSRLGPRPGGGGRGRGRNRRDSGDEDEMRGKP
VLPSVVQASDSRSRRETIDQQNKDTKGNARNRRMFGLLLGTLQRFKDDSQEKQDRDKRRR
DIELKLEERAVQEREDVKKERQMLFNARKRKQQELRQLETKMELVKLQKDWERETKKLSN
FIRTKTRPHIYYLPKELIPSTIRKQQDTRKFIDELVTKRRKKLEEEIEALVRVREEEHGT
EEEEEGEYEEEEEDRKEEDKERGKRKRHHDDQSRDDQEHHDDDEGHPDDQDHHHDEGHHD
DQERFHDDQVRMEEDKENDNSNDRVKSPRARQDSGCKEEGEGGREVEGVGEEKIEEDALE
VAPVPTEVREERVREAEVSVIHSPQMHQIRPREEPRGAPMAINEPMESEDFYGQEQIPED
LDRRAMMHEVSESVED
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggcgaccaccgttcgagggatcgatttgttgcaagagcagttgaaaaaagctcgggaa
cacctaaaagatgtcgatgagaacattaaaaaaataacagggcgatcgccggatgacttc
agtcgaccaggtcagcgcagaatttccattggacgtggtggagatgatacgggagatcgg
gggcgaggcaggttgtttaatgtttccaggcgtggtatcccggacgacgcaccatctgcg
aaaaggcgagctgtaggaaatgccttcagcaggttgggcccacgccctggcggaggaggt
cgtggacgaggacggaaccgacgggacagtggggatgaggatgagatgcgtggaaagcct
gttcttccgtcggttgttcaagcctcagactcccgtagcagaagagagactattgaccaa
caaaataaagacaccaagggcaatgcaaggaatagacgaatgtttggcctgcttcttggc
actctgcagaggttcaaggatgattcacaagaaaagcaggatagagataagaggcgacgt
gacattgagttgaagcttgaagaacgagccgtgcaggaacgagaggacgtcaagaaggag
aggcagatgttattcaatgccaggaagagaaaacagcaggagctcagacagttagaaacg
aaaatggaactggtcaaactgcaaaaagactgggagagagaaactaagaagctatccaac
ttcattcgaactaaaaccaggcctcacatttactacttgcccaaagaactgattccttca
accattcgcaaacagcaagatacccgcaaattcattgacgagctcgtcacaaagcgacga
aagaaactagaggaagagatcgaagccttggtaagggtgcgagaagaggagcatggtaca
gaagaggaggaagagggagagtatgaggaagaggaagaggaccgtaaggaagaggataag
gagcgtggaaagagaaaacgtcaccatgatgaccagagtcgtgatgatcaggagcatcac
gatgatgacgagggtcatcctgatgatcaggatcatcaccatgacgagggtcaccatgac
gaccaagaacgtttccatgacgaccaagtcagaatggaggaagacaaagaaaatgacaat
tctaatgatcgtgtgaagagtccacgggctcgtcaagatagtgggtgtaaagaggagggg
gagggtggaagggaagtcgagggtgtgggggaagaaaagatagaggaagatgcccttgag
gttgctcccgtacctactgaggtcagggaggaaagggtcagagaggcggaggtcagtgtg
attcacagtccccagatgcatcagatcagaccacgggaagagcctcgaggtgccccaatg
gctatcaatgaacctatggagagcgaggacttctatggccaggagcagattcctgaagat
ttagatcgccgggctatgatgcatgaagtcagtgagtcggtcgaagactga

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