Lineus longissimus (bootlace worm): 135484824
Help
Entry
135484824 CDS
T09977
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
llon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135484824
03015 mRNA surveillance pathway
135484824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135484824
03041 Spliceosome [BR:
llon03041
]
135484824
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135484824
Spliceosome [BR:
llon03041
]
Complex C
Other components
EJC/TREX
135484824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
RSB_motif
Motif
Other DBs
NCBI-GeneID:
135484824
NCBI-ProteinID:
XP_064622582
LinkDB
All DBs
Position
3:17508675..17517361
Genome browser
AA seq
496 aa
AA seq
DB search
MATTVRGIDLLQEQLKKAREHLKDVDENIKKITGRSPDDFSRPGQRRISIGRGGDDTGDR
GRGRLFNVSRRGIPDDAPSAKRRAVGNAFSRLGPRPGGGGRGRGRNRRDSGDEDEMRGKP
VLPSVVQASDSRSRRETIDQQNKDTKGNARNRRMFGLLLGTLQRFKDDSQEKQDRDKRRR
DIELKLEERAVQEREDVKKERQMLFNARKRKQQELRQLETKMELVKLQKDWERETKKLSN
FIRTKTRPHIYYLPKELIPSTIRKQQDTRKFIDELVTKRRKKLEEEIEALVRVREEEHGT
EEEEEGEYEEEEEDRKEEDKERGKRKRHHDDQSRDDQEHHDDDEGHPDDQDHHHDEGHHD
DQERFHDDQVRMEEDKENDNSNDRVKSPRARQDSGCKEEGEGGREVEGVGEEKIEEDALE
VAPVPTEVREERVREAEVSVIHSPQMHQIRPREEPRGAPMAINEPMESEDFYGQEQIPED
LDRRAMMHEVSESVED
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccgttcgagggatcgatttgttgcaagagcagttgaaaaaagctcgggaa
cacctaaaagatgtcgatgagaacattaaaaaaataacagggcgatcgccggatgacttc
agtcgaccaggtcagcgcagaatttccattggacgtggtggagatgatacgggagatcgg
gggcgaggcaggttgtttaatgtttccaggcgtggtatcccggacgacgcaccatctgcg
aaaaggcgagctgtaggaaatgccttcagcaggttgggcccacgccctggcggaggaggt
cgtggacgaggacggaaccgacgggacagtggggatgaggatgagatgcgtggaaagcct
gttcttccgtcggttgttcaagcctcagactcccgtagcagaagagagactattgaccaa
caaaataaagacaccaagggcaatgcaaggaatagacgaatgtttggcctgcttcttggc
actctgcagaggttcaaggatgattcacaagaaaagcaggatagagataagaggcgacgt
gacattgagttgaagcttgaagaacgagccgtgcaggaacgagaggacgtcaagaaggag
aggcagatgttattcaatgccaggaagagaaaacagcaggagctcagacagttagaaacg
aaaatggaactggtcaaactgcaaaaagactgggagagagaaactaagaagctatccaac
ttcattcgaactaaaaccaggcctcacatttactacttgcccaaagaactgattccttca
accattcgcaaacagcaagatacccgcaaattcattgacgagctcgtcacaaagcgacga
aagaaactagaggaagagatcgaagccttggtaagggtgcgagaagaggagcatggtaca
gaagaggaggaagagggagagtatgaggaagaggaagaggaccgtaaggaagaggataag
gagcgtggaaagagaaaacgtcaccatgatgaccagagtcgtgatgatcaggagcatcac
gatgatgacgagggtcatcctgatgatcaggatcatcaccatgacgagggtcaccatgac
gaccaagaacgtttccatgacgaccaagtcagaatggaggaagacaaagaaaatgacaat
tctaatgatcgtgtgaagagtccacgggctcgtcaagatagtgggtgtaaagaggagggg
gagggtggaagggaagtcgagggtgtgggggaagaaaagatagaggaagatgcccttgag
gttgctcccgtacctactgaggtcagggaggaaagggtcagagaggcggaggtcagtgtg
attcacagtccccagatgcatcagatcagaccacgggaagagcctcgaggtgccccaatg
gctatcaatgaacctatggagagcgaggacttctatggccaggagcagattcctgaagat
ttagatcgccgggctatgatgcatgaagtcagtgagtcggtcgaagactga
DBGET
integrated database retrieval system