Lineus longissimus (bootlace worm): 135485251
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Entry
135485251 CDS
T09977
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135485251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llon03032
]
135485251
03400 DNA repair and recombination proteins [BR:
llon03400
]
135485251
DNA replication proteins [BR:
llon03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
135485251
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
135485251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
ECT2_BRCT0
BRCT_3
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
135485251
NCBI-ProteinID:
XP_064623166
LinkDB
All DBs
Position
3:complement(1389293..1403436)
Genome browser
AA seq
1635 aa
AA seq
DB search
MIFRTVGQVNGESKLRWVEITMSHQVFCVKSDCGKPSGILQKAFKALADSDLAPEWIEAA
ECLKLTEKRSQVAFIADPFEGAAFDHLSDLHNRIYGPPCILECLQKAEALPKASHPIYSV
TMKGLRICCTGVDTPRKNNIEKCVKYMAGQFDSVFTEAVSHLVAGKIGSKKYLVAGNLQV
KIMAPEWVDAVWEACSKRSISIDDDEFTRLRCPIFKNVVLTVSGLDAHERQEVKIAVQRE
GGCYTGEMKVNDCTHLLIKEPKGQKYEFARKWKIQIVDPKWLRDSIERGYCLDEALYPVK
LGKKTSTPSKDKKTSLACFDTTSNLSSIHNFSSMSSITTLDETAQAKIPSGPFDSLETSV
FKGDMFLDGCKIFLSGFNSVELEKLRKVINLGGGTRFSQINESVSHVVIGERDKEHIQQL
KAAPFRPHVVKAAWLIESFQKGELLPETNYLCLDLPPVINPLSPPPKSRKGSFVKPAQVR
TEKPAAISKPPPASEMGLEDDMQQLLVQYMPKGDATHDGDVTQDPDVTCEPQAEEEESLI
FKGLLFTILGFASEQENELVEYVHEGGGSVGLPRSRAVPDYGIVPVFGCPVNITVKEVVT
NIWLQMCIEEDTLVPVSGEVLFQPVPRAPDATPLMGCVMSISSFSGVLRDCLLHIAEELG
ACVREYFNKKSVKGKKGSTHLLIGVPEGLEGQKYQAAIKWGVPVVTKEWLLECCRTGKKV
PEEQFSPAAVMAIKEEARSRSEHSEERRLSEVTRTVTNKKEEQNQSRNKSVINAGSSSPA
TTPITQVEVKKVEKQPIPSTSGSEVLVTPVRPKRQSLHTGADATLSSPLGHSTPQAGPSK
DSPAPTFKTPVGTGRKSIATPKSLANLRVKQLQDESMSDSKITQLSPHSRGIDSPSKFLD
PNVAWQPSFDLTDILAGLATPEGQVQRSESESEQKERRNSSMDLDELFSYHLALGVKNMM
AQTSFGEGTKDDDGEEEEKKDEKVDHGGGGDSDSKPLSGVVLGVSKKLNARQGELNNLAA
SLGADYRWCYDQSCTHFIFQGRSNDNSKEYKLAKEQKKYIVSPHWLTMCLEQNARVDESL
FPHNYNPNMSLLVVSTKGDTPSKGTRRSTRHTAKPQIPTTATLTPKGASRSKSQSTSDEE
DLEDTNVDAHGRRQSDEERRVPDPEKGDEDKENMSNSDNQKKSDGTGSLEMQEAVSKQLE
DFMAENKGQRPGRRMSKRFNSNGSEESVGSFDSIDKSRPPSRPRSKLAIQSDNNSAKTTR
GSSGSSKTPEPECSQHVEVTWDDPMGRQEQERLASVLHKPYSPTQESLSPVPPGCGEDHA
NTSERVDYSSVMTLKNFGPVNSPQPDFKPPPTPEAPPLAFPRPKPPATAAPPEAIIALDD
ERMKGPPKFLFSGIDPSERTTYGALVEQLGGQVHDGQFFDKSCTHLVAGNCSRNEKYLAS
VAAGKWILHKSYLEACREAGELVKEDDHEWGSDSTAAMKNLTTQNLNLARAAKRWRVKLQ
TERAHDPQWVGAFQDWGVILCCGKSREGGFRRLLEAGGAKVLYTRPPFTNLQDAMYAFID
QTKIDYQIDFQRLVQAGVHCVKPDYISSYLQSDPHPRVEDCYLPEVRQYLISSSGSKKRQ
SSDSGSDVGKRARRE
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcggacagtcgggcaagtaaatggtgaaagtaaactgcgttgggtcgaaatc
acaatgagccatcaagtgttctgtgtgaaaagtgactgtggaaagccaagtggtatcctt
cagaaagcattcaaggctcttgctgactccgacctcgcccctgaatggattgaggctgca
gaatgtcttaagttgacagaaaagaggtcacaagtggctttcattgcagatccctttgaa
ggtgctgcatttgaccatctcagtgacttacataacagaatctatggcccgccatgcatc
ctggagtgtctgcagaaagcagaggcattacctaaagcaagccatccaatctactcagtg
acgatgaagggtctgagaatatgttgtactggagttgacactcccaggaagaacaacata
gaaaagtgtgtgaagtatatggcaggccagttcgatagtgttttcacggaggcagtcagt
catctcgtagcgggtaaaattggttcaaagaaatacttggttgcaggtaatctgcaggtg
aagataatggcaccagagtgggtggatgctgtctgggaggcttgctcaaagaggagcata
agcatagatgatgatgaatttactcggctgcgctgcccgatatttaagaatgttgttctg
acggtttctggcttagatgcccatgagagacaagaggtgaagatagctgttcaaagggaa
ggtggttgttacactggtgaaatgaaagtcaacgactgcacccatctcctcatcaaagag
ccgaaaggccaaaaatatgaatttgcccggaagtggaagatccaaattgtcgatcctaaa
tggttgcgtgattcaatagagcggggatattgcctggacgaagcactttatccggtgaag
ttgggcaagaagacgtccacaccatcaaaggacaagaagacatctctggcctgcttcgat
acaacatcaaacctgagctccatacataacttctcctcaatgtcatcgatcacaaccctc
gatgagacagcacaggcaaagataccaagcggtccctttgatagtttagaaacatccgtt
ttcaaaggagacatgttcttagatggttgcaagattttcctgagcggattcaacagtgtc
gaattagagaagttacgtaaggtaatcaaccttggtggtgggacgaggtttagtcagatc
aatgaaagtgtctcgcacgttgtgatcggtgaaagggataaggaacatatccaacagcta
aaggcagcacctttcagaccacatgtggttaaagccgcatggttgatcgagagtttccag
aagggtgaacttctgcccgaaacgaactacctctgcttggacttgccaccagttatcaac
ccactgtcacctcctcccaaaagcaggaagggatcttttgtaaagccagcacaagtcagg
actgagaagcctgctgccatatcaaagccaccaccagcctcggagatgggtttggaagat
gacatgcaacaacttctggtccagtacatgcccaaaggggatgctactcacgatggtgat
gtcactcaagatccagatgtaacatgtgaaccacaagcagaagaggaggaaagcctcata
ttcaagggccttctcttcaccatcctaggctttgcttcagagcaagaaaatgaattggtt
gagtacgtccatgaaggtggaggcagtgttgggctgccgagaagccgggctgtgccagac
tatggaattgttccggtgtttgggtgtcctgtcaatattactgtcaaggaggtggtcacc
aatatatggctgcaaatgtgtattgaagaagatacattggtgcctgttagtggtgaggtg
ttatttcaaccagtgcctcgagcccctgatgctacacctctgatgggatgtgtgatgtcc
atcagcagttttagtggtgttcttcgcgactgcctcctccatatcgccgaggagctcggt
gcttgtgtgcgggaatatttcaacaagaaatctgtgaaaggcaagaaggggagcacacat
cttctcattggcgtcccggagggattagagggacagaagtaccaggcagctattaagtgg
ggcgtacctgttgtaacaaaagagtggttattagagtgttgtcggacaggcaagaaagtg
cctgaagaacagttttcccctgcagcggtaatggctataaaggaagaggccagatctaga
tcagaacattcagaggaaaggcgattatcagaagttactcggactgttacaaacaaaaaa
gaggagcaaaaccaatcgaggaataaatctgtaataaatgctggctcatcttcccctgcc
acaactcctatcacccaagtcgaggtgaaaaaggtagaaaagcagccgattccatccaca
agtggatctgaagtgcttgtaacaccagttagacccaaaagacaatcattacatacagga
gcagatgcgacgctctcttctcctctcggacactcaaccccacaagctggaccaagtaag
gattctcctgctccgactttcaagacgcctgttgggactgggaggaagagtatagcgaca
ccgaaatccctggccaatctaagagtgaagcaactacaggacgagagcatgtctgacagt
aagataacccaactgagcccgcattcccgaggcatcgattcaccatcaaagttccttgac
ccaaatgtagcctggcagccttcctttgacttgactgatatcttggccggtttagcaact
cctgaaggtcaggttcagcgcagtgagagtgagagtgaacaaaaggaacgtcgcaattcc
agtatggacctcgatgagttgttcagttatcatttggcacttggagttaaaaatatgatg
gcacagacgtcttttggggaaggcacaaaagacgatgatggcgaagaagaggagaaaaaa
gatgaaaaggttgatcatggcggtggaggtgactctgattccaaacccctcagtggtgtt
gtgttaggtgtgagtaagaagcttaacgcccgacaaggggaattgaacaacctggccgcc
tcgttgggtgcagactatcggtggtgctacgatcagtcatgcactcacttcatcttccaa
ggcagaagtaacgacaactcaaaggagtataagcttgcgaaagaacaaaagaagtacatc
gtttctccacactggttaaccatgtgcctagagcagaatgccagagttgatgagagcctt
tttccgcacaattataatccgaacatgtccttgctggtagtgtcaaccaagggagacact
ccttcaaagggaacgcggcggtcaacccgtcacaccgccaaaccacagattccaaccaca
gccacattgacacctaaaggagcaagtcgctcaaagtctcagtcaacatccgatgaggaa
gatttggaggatacaaacgttgatgctcatggcagacggcaaagtgatgaggagcggaga
gttcctgatcctgaaaaaggggatgaagataaggaaaacatgtctaactctgacaatcag
aagaaatccgatggtacaggctccctggaaatgcaagaggctgtcagcaagcagttagag
gacttcatggctgaaaacaaaggtcagcgtcctggtagaagaatgagcaaacgatttaac
tccaatggttctgaagagagtgtgggttcctttgatagtatcgacaagtcacgtccacca
tcgcggcccaggtcaaagctagctattcaaagtgacaacaacagcgcaaaaacgaccagg
ggaagttctgggagctctaaaactccggagccggaatgttcacagcatgttgaagtgacg
tgggatgatccgatggggagacaagagcaggagaggctagccagcgtgttacacaagccg
tacagcccgacccaggaatcattgagtcccgtccctcctggttgcggagaggatcatgcc
aacacatcagagagagtcgactattcaagtgtcatgacgttgaagaattttgggcctgtt
aattctccacagcctgacttcaaacctccaccaacacctgaagctcctcctcttgcattc
ccccgacccaaacctccagccacggcagcgccccctgaagctattattgccctcgacgat
gaacggatgaaagggccaccaaagttcctcttctctggaatagatccttcagagcgtacc
acgtacggtgccctcgtcgagcagctaggtggacaggtacatgatggccagttctttgac
aagtcatgtacacacctggttgcggggaattgttcgaggaatgagaagtatttggcaagt
gtagctgctggaaagtggattctacataagtcatatcttgaggcttgtagggaggctggg
gagttggtgaaggaggacgatcacgagtggggcagcgattccactgctgccatgaagaat
ctaacaacacagaatttgaacttagctcgtgctgccaaaaggtggcgtgtcaagcttcaa
acagaaagagcgcatgatccgcagtgggtaggtgcgttccaagattggggtgtgatcctc
tgctgtggtaaatctcgagagggtggtttcaggcggcttctggaagccggtggagccaag
gtgctttatacgcgacctccgtttactaacctccaagatgcaatgtatgctttcatcgac
cagaccaagattgactatcagattgacttccagagactagtgcaggctggcgtccattgt
gtgaaaccagactacatctcatcctacctccagagtgacccccaccctcgcgtcgaagac
tgctatctccccgaagtccgacaatatctcatcagttcctcaggatcaaagaaaagacag
tcatcagattctggtagtgacgttggaaagagagccaggcgggaatga
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integrated database retrieval system
