Lineus longissimus (bootlace worm): 135485322
Help
Entry
135485322 CDS
T09977
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
llon03016
]
135485322
03036 Chromosome and associated proteins [BR:
llon03036
]
135485322
Enzymes [BR:
llon01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
135485322
Transfer RNA biogenesis [BR:
llon03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
135485322
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135485322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
135485322
NCBI-ProteinID:
XP_064623278
LinkDB
All DBs
Position
3:1984531..1997629
Genome browser
AA seq
1595 aa
AA seq
DB search
MDFSKSALGSLVQISNLNVSDTIKNAFIELKKSTSPSIENIHIQQDHVSLINCILEQAFS
PKNEIPIGGSTVGKADDKSCGLNFDELLAKKLIHEYCLPTLAIVSSLTGQVASYTSLSGS
ICLLIERICHSLPRIEGVSTAENLLAHCTRSLDILYKSRKDPMSLALKEDEPIKKLPVST
LAELCNKLVRYLITCKDLGGKEQCEWKDTVHVLSNNLVQLIAVEDEKTVVKLCSVLARLI
DLQPYNKESILSSVWSTIQDNESDIERAFVILCTLADCFLPITTGDTPFALDNSIVSHTA
FWKLIQAGIPHKNTLARKRSLYLLKRIVDFFEHGKGQLVSKDSECSLFWWDAAEETSLIV
VWQDFMLLVEMLEESIVHVIRPLFPRLKLLEAATYNRKTGPPYLHTSWLLTLLQRALNHD
SLYLMKWGLESLLDVDCKKSPIFTQNQHQFFYSQFLVILNESQFFTRPPGAPSGSCPPLA
FKLATFLQHCLDAQETNSQKHRFITDFLAGVKTVSWNGISLMFVCRAFAELAPAPLFDQE
CIHILRYIVLAMITTVEVQSRGAIQCFLMRAILRLVDVDKVGPEDVINFLSAVKSDESYH
RGTPLWQDSTQWLKEVASNTNGAWNKENLLKVLRSSLAERMRSATIPDPKSGCSASGEAK
LILLLLDADVISVSLSTGETSFDGIMFPVLDVLSSASTRLYLPREKADEALHILVCLLNE
LGGQKSSDVDKVRLKIEKVLEPTRKDILDYVSLRLLNEIKDIVELPIQSLCISSLELLSS
MKPDQTLGDQLATIVTSCVQKLEVKSASSTLDVIIQSYSAIQTLAAISKVIAKMSSNNRS
RHLFSEAESKMLAYVKRNKITDQLPKLASRNDIAGPKAFNENTNMGWLISHYMMYQWQVI
HFCLERSSIDDVLALTDDCLNALDTGSCVVNLPVFSCMKILMPKVVEIDSDLLVRCLKAA
WSSLLEFRRDSQFWPAYECFVAMCFQESLLLAAEEGTAVLETIMQFCDEIFRFGEERCGI
VNVFSSYLCRYLLQEANMRHANMFISCLARASLFGPVHQRSVRFFRDCNAYIKTIKYVCP
TEDSITSQYTSKEDHEVRLDVINFLCSLDLSQPYHTNFIKSYTEEIKRLQRETMKETKYR
HFPNTLQHRESHRLVGTLLVIEQYLEQDDVEAFLNFLTDEVLLKEVQPSVRYLMEMTIVR
IFLRFPSTLPKLWLHLKQSYHMRPALMCSWLCILSQMVAAIDVQQHKESFIIQAIPLVFP
LCMAHQFNLRIYGQSTMLRMWMVCEEKGLSKVLEKYQIMEAIKSFHDTGGNSSKTSKKLL
DHFLFKINPIQDYSMKTIFATLPRLSDVIDDEWLTPEMFLAHDPTWSDPSAHRIPLYPQR
EDLEHALPGTWKMKVVDDDDASGPTDGDVQRKITPWKCMLPSDEEEQEMVYNNKQKMKNG
LVLVASLIDKPPNLGGLCRTSEVFGITQLVLGSLNVLKDPVFQSLSVSSEKWIPIREVAP
HMLMPYLNEMRNHGYTLIGVEQTANSVCMTEFTFPEKSLLLLGHEKGGIPVELIQHLDVC
VEIPQQGVIRSLNVHVSGALLVWEYRRQQLLKSSA
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctaagtctgccctgggatctttggtccaaatatcgaatttgaacgtttcc
gatacgatcaaaaatgcattcattgaactcaaaaagagtacatctccatctatagaaaac
attcatatccagcaggaccatgtctcgctcattaattgcattttagagcaggcattttca
ccgaaaaatgagattccgataggtggcagcactgttggaaaagcagatgacaaatcttgt
ggtttgaacttcgacgaattattggccaagaagctgattcatgagtactgtcttcccact
cttgccatcgtatcctcactaactggccaggtggcaagttatacaagtctgtcaggtagt
atttgcctgttgattgaaagaatttgccattctcttccgagaattgagggggtctcaaca
gcagaaaacttgttagcacattgtacgagatcactggacattttatacaaaagtaggaag
gatcctatgtcacttgcgttgaaggaagatgaaccaattaaaaaactacctgtgtcaacc
ttggctgagctctgtaataaactggttcgatatctaattacctgtaaagatttaggagga
aaagaacagtgtgaatggaaagacactgtacatgtgctgagtaataatttggtacagttg
attgctgtggaagatgaaaagactgttgtgaaactatgctctgttttggcaaggttgatt
gacttgcagccttataacaaagagagcatactttcaagtgtctggtctaccatacaggat
aatgaaagtgacatcgagagagcctttgtaatcttatgtactttggctgattgttttcta
ccgatcaccactggtgacacaccttttgctcttgataactccattgttagtcacacagca
ttctggaagctgatccaggctgggatccctcacaagaatactctggcaagaaagagatca
ttatatctgttgaaaagaatagttgatttctttgaacatggaaaaggtcaacttgttagc
aaggattctgagtgttcattattctggtgggatgctgcagaagagacgagtctaattgta
gtgtggcaggacttcatgctactggttgaaatgctggaggagagtatagtccatgtgatt
agaccactcttcccaagattaaagctccttgaggctgctacttataacaggaaaacaggt
ccaccatatctacacacatcatggctactgacactactgcagagagcattgaatcatgat
agcctctacctgatgaaatggggcttggaaagtctgctggatgttgactgtaagaagtca
ccaatttttactcagaatcaacaccagttcttctacagccagtttctggtcatactgaat
gagtcacagttcttcacaagaccacctggagcaccttcaggaagctgtccaccacttgct
ttcaagttggctacattccttcagcactgtctggatgcccaggagactaacagccaaaag
cataggtttattaccgacttccttgctggtgtgaaaactgtctcgtggaatggaatttcg
ctgatgtttgtctgtcgtgcttttgcagagttggcacctgctccactcttcgatcaggaa
tgtattcatatactaaggtatattgttcttgcgatgatcacaacagttgaggtgcagtcc
cgtggtgccattcagtgtttcctgatgcgggcaatcttacgacttgtcgacgtggataag
gtcggaccagaagatgtgatcaacttcctgagtgctgtgaagagtgatgagtcctatcat
cgtggtacaccactctggcaggatagcacccagtggctgaaggaagtcgcatctaataca
aatggtgcttggaacaaggagaacttgctgaaggttctgaggtcatcactggccgagagg
atgagatctgctactatacctgatccgaaaagtggttgcagtgcttctggtgaggccaag
ttgatccttctcctcctcgatgctgatgttatctccgtcagcctctccaccggggagacg
tcattcgatgggatcatgttcccagtcttggatgttctgtcgtctgcttccaccaggctc
tatcttccacgagagaaggcagatgaggccctacatatcttggtttgtctgctaaacgaa
ttgggaggacaaaaatcttcagatgttgataaagtacggctaaagatcgagaaggtacta
gagccaacaaggaaggacattcttgactatgtctcacttcgcctgctgaatgaaatcaaa
gatattgttgagcttcccatccagagtctatgcatctcctccctagaactcctatcatcg
atgaaaccagaccagacactcggagaccaacttgcgacaattgttacatcgtgtgttcag
aagttggaggtgaagtctgctagttccactttagatgttattattcagtcgtacagtgct
atacagacattggccgcaatatccaaggtgatagcaaagatgtcatccaataaccggtca
cgccatctattcagtgaagctgaatcaaaaatgttagcttatgtgaagaggaacaagatt
acagaccagctaccaaagttggcatcgagaaacgatattgctggccccaaagctttcaat
gaaaacaccaatatgggctggttgatctctcactacatgatgtaccagtggcaagtcatc
catttctgtctggagaggagctctatcgatgatgtgctggcattgactgacgattgcctg
aatgctcttgacacaggttcatgtgtggtgaatctgcctgtcttcagctgtatgaagatc
ctcatgccaaaggtggtagagatcgacagtgatctgcttgtgcgctgcctaaaagctgct
tggtcaagtctactggagtttcgacgtgacagccagttctggccggcatatgagtgtttt
gtggcgatgtgctttcaagagtccctgctgctagcagcagaggaaggaacagcagtgtta
gagacaatcatgcagttttgtgatgagatcttccgcttcggtgaggaacgatgcggtatc
gtgaatgtgttcagctcatatctgtgccgctacctccttcaagaggcaaacatgagacat
gcgaatatgtttatatcctgcctggctcgtgcttccttgtttggcccggtgcaccagcgc
agtgtcagatttttccgcgattgcaatgcttacatcaagacaataaaatacgtctgcccg
actgaggactctattacaagccagtatacttccaaagaagatcatgaggttcgtcttgat
gtcatcaactttttgtgttcccttgacctgagtcaaccttatcacacaaacttcatcaag
tcatacacggaggaaataaaacgtcttcagcgagagaccatgaaggagaccaagtaccgc
cacttcccaaacacattacaacaccgagagtcgcatcgtcttgtcgggacattgcttgtg
attgaacagtatcttgaacaggatgatgtagaggccttcctcaacttcctgacagatgag
gttctgctgaaggaggtacaaccatcagtgcggtacctcatggagatgaccatcgttcgt
atcttccttcgcttcccatcaacactgccgaaactctggcttcatctaaaacagtcatac
cacatgagaccagctttgatgtgctcctggttgtgcatcctctctcagatggtggctgca
atagatgtgcaacaacacaaggagtccttcatcatacaagcaatccctcttgtattccca
ttgtgtatggcccaccagtttaacctgaggatctacggccagtccaccatgttgaggatg
tggatggtctgtgaggagaagggcctgtccaaggtgcttgagaaatatcaaatcatggaa
gccatcaagagcttccatgacacaggcggcaactcaagtaagacttccaaaaaactactg
gatcatttcctcttcaagatcaacccaatccaagactactctatgaagactatctttgcg
acgctgccacggctctcagatgtcatagatgacgaatggctgaccccggagatgttcctg
gcacacgacccgacctggtctgacccatctgcccataggatacctttataccctcagaga
gaagacctggaacatgcgcttcctggaacatggaagatgaaagttgttgatgatgatgat
gcctctggcccaacagatggagacgtccagcggaagatcacaccatggaaatgcatgttg
cccagtgacgaggaggaacaagaaatggtttacaataacaaacagaagatgaagaatgga
ttggttcttgtcgcttcgctcattgataaaccaccaaacctgggaggtttgtgtcgaact
agtgaggtatttggtataacacagctcgttcttggcagtctgaatgtcttgaaggatcca
gtgttccaaagtctgagcgtatcatcagagaaatggataccaatccgagaggttgctccg
catatgttgatgccctacctgaacgagatgcgtaaccatggatacactctgatcggtgtt
gagcagacagcaaacagtgtctgtatgacagaatttacattcccagagaaatcactgttg
ttattaggtcatgagaaaggtggtatcccagtggagctgatccagcatcttgatgtgtgt
gtagagatcccccagcaaggtgtgatacgatcattgaatgtccatgtcagtggtgcttta
cttgtctgggaatacagaagacagcagctactcaaatcaagtgcttag
DBGET
integrated database retrieval system
