KEGG   Lineus longissimus (bootlace worm): 135485511
Entry
135485511         CDS       T09977                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
llon  Lineus longissimus (bootlace worm)
Pathway
llon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:llon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135485511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:llon03041]
    135485511
   03032 DNA replication proteins [BR:llon03032]
    135485511
Spliceosome [BR:llon03041]
 Complex A
  U1 snRNP components
   Sm proteins
    135485511
  U2 snRNP components
    135485511
 Complex B
  U1 snRNP components
    135485511
  U4/U6.U5 tri-snRNP components
    135485511
 Complex C
  U2 snRNP components
    135485511
DNA replication proteins [BR:llon03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     135485511
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 135485511
NCBI-ProteinID: XP_064623678
LinkDB
Position
3:complement(5441561..5443463)
AA seq 118 aa
MASLAKPKSEMTPEELATREQEEFSAGPLSILTMSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEFPRAGKGKKKAKAVNKDRYISKMFLRGDSVILVLKNPLAVNK
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcgtcactggcaaaacccaagagtgagatgactccagaggagttggcaactcgagaa
caagaggagttcagcgctggcccactttccatcctgaccatgtcggtcaagaacaacacc
caggttctcatcaactgcagaaataacaagaagttactcgggagagtaaaggcatttgac
agacattgcaacatggttttagaaaatgtgaaagagatgtggacggagttcccccgagct
ggcaaaggcaagaagaaggctaaagcagtcaataaggacagatatatctcaaagatgttc
cttcggggagattcagtaatccttgtcctcaaaaatccacttgctgtcaacaagtaa

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