Lineus longissimus (bootlace worm): 135485936
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Entry
135485936 CDS
T09977
Name
(RefSeq) uncharacterized protein LOC135485936 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135485936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135485936
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135485936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
135485936
NCBI-ProteinID:
XP_064624403
LinkDB
All DBs
Position
4:4322139..4333640
Genome browser
AA seq
1339 aa
AA seq
DB search
MSRHRNVRSMNIADEYDYDDVYGHSVEDDYCISPGTAAQFTFNRDSGHNLASFIGQPEIP
EEGEGDLESDSEHEVLNDSGNYRRPVLNEFDQARLNSCLEEVRNVVGDSTPEHILVDTII
KTDFNYEVALDTLFNKQENKPTEAPKPQREPRPNRRNKDDDCGEDSDPDISFPTQKVDHG
VKPPPGLGKAAKIKISNPPPGFKKIEKNAPPTFKNPNLLTEFFPKSNPCPLLPENRGEIS
DSICAEGNEGALSVSGAVQSSLAELNTNRDSRENSVDQKQNNRQSKGGTILKLGISGTDL
IDASSDSNQMTLSRDQKTLELDIGSSPPVKSGLSLSELAQGVKSSSGKLPVSCNRPLLTS
GISLANLAQQQSVNSGIPNLNSTGSSAQNVAAFSSCSTGLGLTSSNTKFISLAALAEEHS
GGTQHSGSSLSSGPPRGISLAALAQKHGTTDKPFETTFKGLRLDESGRDDTSDTSTCDSS
EKRKAEAKSIPFLKSMQSLKLTPPSSGFSLADLASNHQTSSHGGMMLPSQGMSLADLASQ
HQTSNSRGMMPSSQAMSLADLASKHQMSNSGGMVHSSPGMSLADLSSRHLTPNLGAKPKD
LPGLHLSVSQRTNPTKHARPSPMDVDAPPTDSNLTDSLSGHRPTSQEQIKIPKEILRKPS
LFATILCSKSQTRQLTPIEARLFKRDPSHSVFSYTRQTSLKKKVTDSQNDLKPFGFLTPS
PDDIVKNRQKAAFTRGKDSAGFNPDFKLDPHPVSARNHDATSSPVRAGNTNAVSDNIARM
TFSNGKKKTTTGFEAVVDGGTMQKRSGESEKFHDLSDIVDVPMEAASRSPLSVKKSSSNG
VTQKSSSDSVLLTPAKSSSKPVSPPQSRGSVNTERRGSVNYTPERRGSKQIERVDIQKEL
DKRKGGKDLINLVVIGHVDAGKSTLMGHVLYQLGFVGKRAMHKYEQESKKMGKASFAYAW
VLDETEEERTRGVTMDVAQTRFQTDTKMVTLLDAPGHKDFIPNMITGAAQADVAILVVNA
TKGEFETGFEMGGQTREHALLVRSLGVSQIAVAINKMDTVGWDQGRYNEIVKKLGQFLKQ
AGFKEADLSFVPCSGLNGENLTECKDPVLKSWYSGPTLIQQIDKFRAPDRPMDRPFRMCV
ADIFKGMGSGFTVTGKIEAGSVQCGDRILAMPIGEPATVKGIALDEEVVPCAVAGDYTSL
TITGIDQDRVNVGSILCDVVTPIQATTRIQARVVIFNIDVPLTKGFPVVFHYQTITEQAH
IKKLISQLHKSTGEVIKKRPRCLVKNSNAVIEIELSRPICVELYKDYKDLGRFMLRYGGS
TIAAGLVTEILPGKSKQTE
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacaggaatgtccgctctatgaatatagcggatgaatatgattatgacgat
gtgtatggacattctgtggaggatgattattgtatttcccctggaactgctgcccagttc
accttcaacagggacagtggtcataatctggcctccttcattggtcagccagagattcct
gaggagggtgaaggagacctagagtctgacagtgaacatgaagtgcttaatgattcagga
aattatagacggcctgttctaaatgaatttgaccaagcacgcctcaattcttgtcttgaa
gaagtccgcaatgtggttggcgattctacccctgaacacattcttgttgacacaatcata
aagactgatttcaattatgaagttgccttagataccctctttaataagcaagagaataaa
cccactgaagctcctaaaccacagagggaaccgcggcctaacaggagaaataaagatgac
gattgtggtgaagactctgaccctgatatctcattcccaacacaaaaagtagaccatggt
gtgaaacctccgccagggctgggaaaagcagctaaaatcaaaattagtaatccaccgcct
gggttcaaaaaaattgaaaaaaatgccccacctactttcaaaaatcctaatttattgact
gaattttttccaaaatcaaacccttgccctcttttacctgaaaatcgtggtgaaatttcg
gattctatttgtgctgagggaaatgaaggtgctctgtcagtttctggtgctgtgcaatcc
tccctggcagagctaaatacgaatcgtgacagtcgagagaacagtgtagatcaaaaacag
aataacagacaaagcaaaggaggaaccattttgaaattaggcatctctgggacagattta
atagatgcttcttctgattcaaatcaaatgacattatcaagggaccaaaagactttggaa
ttggatattggttcatctccaccagtaaaaagtggactttcgttaagtgagttagcccag
ggtgtgaaaagcagctcgggaaagctaccggtaagctgtaatcgtccactgttaacttca
ggaatatccttggcaaacttagcacaacagcaaagtgtcaattctggcattcctaacttg
aacagtactggtagtagtgcacaaaatgtggcagctttttcttcttgttctactggatta
ggattgacttccagcaacacaaaatttatatcactagcagctctggctgaggagcatagt
ggtgggacgcagcattccggaagtagcctgtcttcaggacctcccagaggaataagtttg
gcagcactcgcacaaaaacatgggaccacagacaagccatttgagacaacgtttaaggga
ttgagattagatgagtctggcagagatgacacatcagataccagtacttgtgacagctca
gaaaagcgcaaggcagaggcaaagagcattccatttctcaagtctatgcagtcgttgaag
ctcacaccaccgtccagtggcttctctcttgctgatctggcttctaaccaccagacgtct
agtcatgggggaatgatgctgccttctcagggcatgtcacttgcagatcttgcttcccaa
caccagacatccaactctcggggaatgatgccttcatcacaggccatgtcacttgcagat
ctggcttccaaacaccagatgtctaattcgggaggaatggtgcactcatctccgggaatg
tcacttgcagatctttcttccagacacctgacgcctaacttgggtgcaaaaccaaaagac
ttgcctggcctacatctctctgtatcccaacgaacaaaccctaccaagcatgcgcgtcca
agcccaatggatgtagatgcaccacccaccgattcaaatctaactgactcccttagtgga
catcgacccacctctcaggaacaaatcaaaattccaaaagaaatactccggaaaccttcc
ctttttgcaacaattttgtgttcaaaatctcaaacaaggcagctaacaccaattgaggct
aggctgtttaaaagagatccgtcccattctgtgttttcttacacgcggcaaacgtcgctc
aaaaagaaggtgacagattcacaaaatgatttgaaaccttttggctttttgacgccatca
ccagacgacattgtcaagaacagacaaaaggctgcatttaccaggggcaaagatagtgct
ggcttcaaccctgacttcaaactcgacccacacccagtgagtgccagaaatcacgatgcc
acctcaagtccagtacgagcgggaaacaccaatgctgtctcagataatatcgctagaatg
actttctcaaatggaaagaagaaaactactactggttttgaagcagtagttgacggtgga
acaatgcaaaaacgctcaggcgaaagtgaaaaattccatgatttgtcagacattgttgat
gttcctatggaggcggcttcaaggagtccgttgtcagtgaaaaagtccagcagcaatggc
gtgacgcagaaaagttcttcagatagtgttctcctgacaccggccaaaagctcttcaaaa
ccagtatcccctccccagtcgagaggttctgttaatacagaacgtcgagggtctgttaat
tacactcctgagcggagaggatccaaacaaatcgagagggttgacatccaaaaagaatta
gataaaagaaaaggtggaaaggatttgataaacttagttgtgataggccatgtagatgca
ggaaagagtacgctgatgggacatgtgctatatcagcttggctttgttgggaagagagct
atgcacaagtatgaacaggagtcgaaaaagatgggaaaggcatcttttgcttatgcctgg
gtgctagatgagacggaagaggaaaggacacgcggtgtgacaatggacgttgctcaaact
cgtttccaaactgacacgaaaatggtgacactcttggacgctccaggtcacaaagatttc
atcccaaatatgattactggtgctgctcaggccgacgttgccattctcgtagtcaatgca
acgaagggcgagttcgagactggcttcgagatgggtggacagacgcgtgaacatgctctc
ctggtgcggtcattaggtgtttcccagattgctgttgccatcaataaaatggataccgtc
ggctgggatcaagggcgttataatgaaatagttaaaaaactaggccagtttttaaaacag
gcgggtttcaaagaagctgatttatcttttgtgccatgtagcggactgaatggtgaaaac
ctcacagagtgtaaagatcctgttctaaaatcttggtacagcggtccgacacttattcaa
caaatagacaaattccgagccccagatcgtccaatggataggccttttaggatgtgtgtg
gcagatattttcaagggcatgggcagtgggtttactgtgacggggaaaatcgaagctgga
agtgttcagtgtggagatcgtatacttgccatgccaataggagaacctgctacagtcaaa
ggtattgccttggatgaagaagtagtaccatgtgccgtggctggagattatacctcactt
acaattactggcatcgaccaggacagagtgaacgttggctctattttatgtgatgtcgtt
acacctattcaggccaccaccaggattcaagccagagtagtgattttcaacattgacgtg
cctctcactaaaggcttcccagttgtgttccattatcagacaataacggaacaggcacac
atcaagaaactcatcagtcaacttcacaagagtactggcgaagtgattaaaaagagacca
agatgtctggtcaaaaattctaatgctgtgatagaaatcgagttgagtcggccaatttgt
gttgaactctacaaggactataaggatctgggtcgcttcatgttacgatacggtggttcg
acgatagcagctggacttgtcactgagattctgccaggcaaatccaaacagacggaatga
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