KEGG   Lineus longissimus (bootlace worm): 135486144
Entry
135486144         CDS       T09977                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
llon  Lineus longissimus (bootlace worm)
Pathway
llon03020  RNA polymerase
llon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:llon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135486144
  09124 Replication and repair
   03420 Nucleotide excision repair
    135486144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llon03021]
    135486144
   03400 DNA repair and recombination proteins [BR:llon03400]
    135486144
Transcription machinery [BR:llon03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     135486144
  RNA polymerase III system
   RNA polymerase III
     135486144
  RNA polymerase I system
   RNA polymerase I
     135486144
DNA repair and recombination proteins [BR:llon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135486144
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NA-iREase1
Other DBs
NCBI-GeneID: 135486144
NCBI-ProteinID: XP_064624759
LinkDB
Position
4:7415750..7418711
AA seq 210 aa
MDDEAETWKLWRIRKTIMQLCHDRGYLVTQEELDQTIAQFKEQFSVRTGDMRPSRSDLTV
LVAHNDDPTDQMFVFFPEEAKIGIKTVKSYCQTMQKENITRAIIVVQAGMTPSAKQSLID
MAPKYILEQFLEAELLINITEHSLVPEHVLMTPEEKKELLIRYKLREFMLPRIQQGDPVA
RYFGLKRGQVVKITRPSETAGKYITYRLVV
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaagcagagacgtggaagttatggcggatcaggaaaacaatcatgcagctt
tgtcatgacagaggctatcttgtcactcaagaggagttggatcaaacaatagcacagttc
aaggaacagttttcagttagaactggtgatatgcgtccctccagaagcgatctgacagtt
ttggttgctcataacgatgatccaacagatcagatgttcgtgttcttcccagaagaggcc
aagattggtataaaaacagtcaagtcgtattgccagacaatgcaaaaggaaaatataaca
cgggctatcattgtggtccaggcaggcatgacaccctctgctaaacagtcgctgattgac
atggcaccaaaatacatcttagaacagttcctcgaggctgaattgttgattaacatcaca
gaacattcgttggttcctgaacacgtgttgatgacaccagaagaaaagaaggaactcctc
ataagatacaaattaagagaattcatgttaccaaggatacagcagggtgatccagttgcc
agatactttggactcaaaagaggacaggttgtcaaaatcacccggccgagtgaaactgcc
ggtaaatacatcacgtatcgtcttgtcgtttag

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