Lineus longissimus (bootlace worm): 135486342
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Entry
135486342 CDS
T09977
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135486342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llon03041
]
135486342
Spliceosome [BR:
llon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135486342
Complex C
U4/U6.U5 tri-SnRNP related factors
135486342
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
135486342
NCBI-ProteinID:
XP_064625128
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All DBs
Position
4:22800284..22803980
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AA seq
349 aa
AA seq
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MANRTVKDAHSIKGTNPQYLVEKIIRSRIYECRYWKESCFALTAELLVDKAMELRYVGGS
FGGNIRPTPFLCLILKMLQIQPEKDIVVEFIRNADFKYVRALGAMYMRLVGTSIECFKYL
EPLYNDFRKIRRQTKDGNFSVVHMDEFIDELLREERVCDIILPRIQKRSVLENNNELEPR
VSALEEDMDDVESSDEEEMVEVNRSPSPSHKRSSGHHRDRDWDQSRRSLSPKFKRSPSPH
RRRSRSRERHGERDAKRRRSRSPRDKDRRQRTDRDRHRRGDDERKHHRSSKRSHRDERDE
KKSKSSRDHSDRGDRHRHRDKNRSESTYDQEIREANEMRAKLGMAPLRP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagaactgtgaaagatgctcattctattaagggcacaaatccccaatattta
gtggaaaagatcatccgtagtcgaatttacgaatgcagatactggaaagaatcatgtttt
gcactaactgccgaattattggtggacaaggccatggagttacgttatgtgggtggtagt
tttggaggcaatattcgaccaacaccatttctgtgtctcatcctgaagatgttacagatt
cagcctgagaaggatattgtcgtggaattcatcagaaatgcagacttcaagtatgtgcgg
gctcttggtgccatgtacatgaggttggtgggaacctccattgaatgtttcaagtatttg
gaacctctttacaatgactttaggaagatcaggaggcagacaaaagatggaaattttagt
gttgtgcacatggatgagtttattgatgaattactgagagaagaacgagtgtgtgacatc
atcttaccaagaatacagaagcgatcggtccttgaaaacaataatgagttggagccacga
gtgagtgccctggaggaagatatggatgatgtggagagttctgatgaggaggagatggtg
gaggtaaatagaagcccatcaccaagtcacaaacgaagtagtggtcatcatcgagaccga
gattgggatcaatcgagacgaagcctgtccccaaaatttaagagaagtccttcaccacac
agacgaagaagtcgctcaagagaaaggcatggagaaagagatgctaaacgtcgtcgaagt
aggtcccctcgagacaaggatcgtcgccagaggacagaccgagatcgtcacaggagggga
gatgatgaaaggaaacatcaccgcagcagcaaacgcagccatcgtgacgaacgtgatgaa
aagaagagtaagagttcccgggatcattctgatcggggggatcgtcatcggcaccgagac
aagaatcggtcggagtcgacatatgaccaggagatccgggaggccaatgaaatgagagca
aagcttggaatggccccgttaagaccttga
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