KEGG   Lineus longissimus (bootlace worm): 135486455
Entry
135486455         CDS       T09977                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
llon  Lineus longissimus (bootlace worm)
Pathway
llon03020  RNA polymerase
llon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:llon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135486455
  09124 Replication and repair
   03420 Nucleotide excision repair
    135486455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llon03021]
    135486455
   03400 DNA repair and recombination proteins [BR:llon03400]
    135486455
Transcription machinery [BR:llon03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     135486455
DNA repair and recombination proteins [BR:llon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135486455
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 135486455
NCBI-ProteinID: XP_064625318
LinkDB
Position
4:complement(1550397..1552185)
AA seq 141 aa
MAAAAQLPNDIQEEDASELQFPKEFENAETLLISEVKMLLEHRKQQNESAEEEQELSEVF
MKTLNYTQRFSRFKNRETIAAVRNALMQKTLHKFELAALANLCPETAEEAKALVPSLEGR
FEDEELQSLQDDIQNKRSFQY
NT seq 426 nt   +upstreamnt  +downstreamnt
atggccgccgctgcacaattacccaacgatattcaagaagaagatgcctcagaattacaa
tttccgaaggagtttgaaaatgctgagacactgctgatctcggaggtgaagatgttatta
gaacacaggaaacagcagaatgaaagtgcggaggaggaacaggaattgtcagaagttttt
atgaagacgctcaactatactcagcggtttagtcgtttcaaaaatagggaaaccattgca
gctgtgagaaatgcactgatgcagaaaaccctccacaagtttgaattggcagctcttgcc
aacctctgcccagaaactgcagaagaggcgaaggctcttgttccaagtcttgaaggacgg
tttgaggatgaggagcttcagagtttacaggatgacatccagaacaagaggagtttccag
tattga

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