Lineus longissimus (bootlace worm): 135486566
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Entry
135486566 CDS
T09977
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135486566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llon03021
]
135486566
Enzymes [BR:
llon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135486566
Transcription machinery [BR:
llon03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135486566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
Motif
Other DBs
NCBI-GeneID:
135486566
NCBI-ProteinID:
XP_064625511
LinkDB
All DBs
Position
4:complement(8572242..8613338)
Genome browser
AA seq
1732 aa
AA seq
DB search
MFIGKENQHNVLSGISFTIYSAEDIQRLSVREITNPKLFDDLSHATSGGLYDPVFGPTER
DDVCGTCGQSSLHCPGHMGHIVLPLPVYNAVLFKVLLRILKLTCFHCHRVRAETLNVELL
ASNLKLLERGLVHHLQAVADIGSELAAIQKCPDDLIIAKFREYLESAMADSGKSVRGNYV
MAKNVVELRQDMINEFTKEHMKESTPCPHCKAPARRLRSAQQSKIFFSTDVSKTKQKQYR
QSQETKKAKRKQIRAGDDDPEVTEEDDDIDSLKDSMDAELTGQVYLTPVRIREHLALVWK
HDSTLLQYLFGALKAIAHQRACPTDVFFIDCVPVPASKYRPIASMGDKKYENRQTANLSR
VLQSSILLRELIAQRAKGELENGLTDLDAPKKGSSTEKLQSAWIRLQTQVNCIVDSDLDK
FSKDAMPGIKQLLEKKEGLFRKNMMGKRVDFAARSVISPDPYINTDEVGIPDVFAKKLTY
PEVVTPWNVQELAEAVCNGPEKHPGAVFVIQEDGNKVMLHKDSLTRRQAVANQLLKPKLS
ADGRPILGHKKVLRHLKNGDVLLMNRQPTLHRPSIQAHKARVLTGEKTLRLHYANCKAYN
ADFDGDEMNAHFPQNELGRAEAYHIVSTNYQYLVPKDGTPLAGLIQDHMISGVLLTMRGR
FFGKHDYQQLVYSTLTHSQHPVKTLRPALIKPSALWSGKQVISTVLLNLIPDGKPAINLD
GKAKIPGKSWNTGKSRNWAAGGSPLNGLDMSESEVIIRQGELLVGVLDKAHYGATPYSLV
HCFYELYGPQVAGKLLTALARVFTIFLQYHGFSLGVEDILCTPKADQSRRKVMEDGAQSG
PAASAKAFKLDDDSDGELIVRRYHMAHFNKDDSELKELDHAMKGFTDECQNQITKACMPT
GLHKMFPKNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMMSGRGLPSFRPYDV
TPRAGGFVDGRFLTGIRPQEYFFHCMAGREGLIDTAVKTSRSGYLQRCIIKHLEGIQVAY
DLTVRDSDGSIVQFSYGNDSLDVPSTQFLNEKQFPFLIQNEQCLFDKEQIQMVNKKLDTE
SAIQHRKKLKKEHKNNRKHPAKPFQQYCIKRGEEPDFSDSSNGRCQSALDLAESWRNLGE
SKKKKYIDDSKTLEPTLSKFRPDRYFGAISDRLDGIIDSYITSNPDKLLKSKHNPKGTMD
ADRFQTLLNLRISQSVAEPGQAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRL
REILMIASASIKTPAMEIPVLPHVSQKEAHTLQKKLTKVTLADVLEDMEVSEYLSIKSRI
DRSRVYKIRLNCLPPDNYDEKFYVTPAEILHCIEKVCIKEFITAIKKKCDAIKSRMLLTS
FKSVLRSSSAKDAPKDAASSTPTAEDEADHLSDDDQYDGDATMSKTRKRYADEQDYDGEQ
EEKDEVLEEFDDEGSDVEQNENENEEEADDSDEGEGHSDSDNLMEHSNAKVSSAKKRKRK
KVKEMDHRRINGVLNLGTMVEDYKYDAENELWCEITFKADIQKEKVDMTSLLEAAARKIV
MYETPRITRGILSTSRKPGSEGQMIMKTEGVNIPAVFQYRDLLDLNQLYCNEIHAIYHTY
GIEAACRVIIKEIRDVFAAYGINVDYRHLSLIADYMTFEGQYKPFNRHGIESNASPLQKM
TFETTMHFLRDATISGARDNLQSPSARIVTGQPVYTGTGSFEVIVPLVKPKW
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgtttattggaaaggagaaccagcataatgtcctcagtggcatttcattcaccatatat
agtgcagaagatatccagcggttgagcgtccgcgaaattaccaacccgaagctgtttgat
gatctatctcatgcaacatccggtggactgtatgatcctgtttttggtccgactgagaga
gatgatgtttgtggtacttgtggccagagttctctccactgccctggtcacatgggccac
attgtgctgccactaccagtctataacgcggtgctcttcaaggtcttactcaggattttg
aagttgacatgttttcactgccatcgtgtgcgtgcagagactctcaatgttgagcttctt
gcgtccaacctcaagttgttggaacgaggccttgttcatcatctgcaggctgtggcagac
atcgggtcggaacttgctgcaatccaaaaatgtccggatgatttgatcatagctaaattt
agagaatatttggaaagtgcaatggcggattcaggcaagagtgtccgtggtaactatgtc
atggcaaagaatgtcgtagaattaaggcaggatatgataaatgagtttacaaaagagcat
atgaaagagtcgaccccttgtccccactgcaaggcaccagcccgacggctacgctcggcc
caacagagcaaaattttcttcagtacagatgtaagcaagacgaagcaaaagcagtacaga
caatcacaagaaacaaagaaagcaaagcgcaaacaaatcagggcgggcgatgatgaccct
gaagtgaccgaagaagatgatgatattgattcgctgaaggactccatggatgcagaactg
actggccaggtttatctgacaccagtgcgaattcgcgaacatttggcactagtctggaaa
cacgacagcaccttattgcagtacttgtttggtgcactgaaggcgatagcacatcagaga
gcgtgcccaacggatgtcttcttcatcgactgtgtgcctgtgcctgcttcaaagtaccgg
ccaattgcttcaatgggtgacaagaagtatgagaatcgacagacggctaatctctcaaga
gttttacagagcagtatccttcttcgggaactcatagcccaacgcgccaagggggagttg
gagaacggattgacagatcttgatgcgccaaagaaagggagttccactgagaagcttcag
agcgcctggatcaggttgcagacgcaggtcaactgtatcgtagacagcgaccttgacaag
ttttccaaagatgctatgccaggaataaaacagcttcttgagaaaaaggagggactcttt
cgaaagaatatgatggggaaacgtgtcgactttgctgccagatctgtgatatcacctgac
ccctacatcaacacagatgaagtgggcattcctgatgtctttgccaagaagctgacttat
ccggaggtggtcaccccttggaatgtccaggagctcgctgaagcagtctgcaatgggccc
gagaagcaccctggcgccgtcttcgtaattcaggaagatggaaataaagtgatgcttcat
aaagatagtctgactcgacgacaagcagtcgctaatcagttactcaaacctaagttgtca
gctgatgggaggcccattcttggtcacaagaaggtactgcgtcatttgaagaacggtgat
gtgctgttgatgaatagacagcctactctacacaggcctagtatacaggcgcacaaggct
cgagttttgaccggtgagaagacgctacgtctgcactatgctaactgtaaggcatacaat
gcagattttgatggtgatgaaatgaatgctcacttcccacagaacgaattgggtagagct
gaggcatatcacatagtgagcaccaactatcagtatctcgtgccaaaggatggaacaccc
cttgctggtctcattcaggatcatatgatatctggtgtactactcaccatgagaggacgt
ttcttcggcaagcatgactaccagcagcttgtctacagtactttgacgcacagtcagcat
cctgtgaagacgctgcgacctgcactcattaagccatcagcgttgtggtcaggaaaacag
gtcatttcgacagttctgttaaacttgatccccgatggaaaacctgcgataaatctggac
ggaaaggcgaaaatccctggcaagagctggaacacagggaaaagtcgcaattgggctgca
ggtggttcacccttgaatggcttggatatgagcgagagtgaagtgattattcgacaggga
gagctgcttgtcggtgtcctggacaaggctcattacggtgccaccccctacagtttagtt
cactgcttttatgagctctatggccctcaagtagctggtaaactgctaactgctcttgca
agagtcttcaccatatttctgcagtaccatgggttctccttaggagttgaagatattctg
tgtacaccaaaggcagatcagagtaggcgcaaggtgatggaagatggagcacagtctggt
ccagctgcttcagctaaagcattcaagcttgacgacgacagtgatggagagctgatagtc
aggaggtaccacatggcacacttcaataaggacgactccgaactgaaggagcttgaccat
gccatgaagggattcacggatgagtgtcagaaccagatcaccaaagcttgtatgccgact
ggtctccacaagatgtttcccaagaacaatctgcagttgatggttcagtcaggagcgaaa
ggttcaactgtcaacaccatgcagatctcctgcttgctcggacaaatcgagttggaaggt
cgccgtccccctctgatgatgagtgggcgaggtctgccgtcgtttcgtccgtatgatgtc
acaccgagagccggcggattcgttgatggtcgtttcttgacaggtatccgaccgcaggag
tacttctttcattgcatggcaggaagagagggtctgattgatactgccgtgaagacaagt
cgaagtggatacctgcagaggtgtataatcaaacatttggagggtatacaggtggcttat
gatctgacggtcagagacagcgacggaagcatagtacagttcagttatggcaatgacagc
ctcgatgtgccatccactcagttcttgaatgagaagcagttcccattcctgatacaaaac
gagcagtgcctttttgacaaggaacaaatacaaatggtcaacaagaagttggacacagaa
tctgctatacagcataggaaaaagctaaagaaagaacataagaacaaccgaaagcatcca
gcaaaacccttccagcagtattgtataaagagaggagaggaaccagacttctctgacagc
tccaatggcagatgtcagtcggcattagacctggctgagtcgtggaggaatttaggtgaa
tcgaagaaaaaaaagtacattgatgattcgaagacactcgagcctactttgtccaagttt
cgcccagatcgttactttggtgctatatctgacaggcttgatggaatcatcgatagttat
ataacgtcaaatcctgacaagttgttaaagagtaagcataatccgaaaggcaccatggat
gccgaccgatttcaaacgcttctgaatctccgcatcagtcaatcggtagcagagcctgga
caagcggttggactcctagctgcgcagtcgattggcgagccgagtacgcagatgacgctg
aacactttccactttgctggacgtggtgaaatgaacgtgacgctcggtattcctcgtctt
cgggagatcctcatgatagctagcgcatcgatcaaaacaccggccatggagataccggtg
ttgccacatgtcagtcaaaaggaggctcatactcttcagaagaagttgacaaaggtcacc
ctggcagatgtcttagaagacatggaagtttctgaatatttgagcatcaagagcagaatt
gatcgatcccgtgtgtacaaaattcgcctcaattgccttccgcctgataactatgacgag
aagttctatgtgaccccagccgaaatcttgcactgcatagagaaagtctgcattaaggag
ttcattactgccataaagaaaaaatgtgatgcgatcaagtccagaatgctcctgacatcc
ttcaagtcagtgctccgttcgagttctgctaaagacgcgcccaaggatgccgcaagcagt
acccccacggctgaggatgaggcagatcatctctcggatgacgaccagtatgacggtgat
gccacaatgtctaaaacgcgaaagaggtacgccgatgagcaggactatgatggagagcaa
gaggagaaagatgaggtccttgaggagttcgatgatgaaggttctgatgttgaacagaat
gaaaacgaaaatgaagaagaagcagacgactctgacgaaggtgaaggtcactctgacagt
gataatctgatggaacattcaaatgccaaagtgtcgtctgctaaaaaacgaaagaggaag
aaagttaaagagatggatcaccggagaataaatggagtattaaatctcggaacgatggtt
gaagattacaagtatgatgcagaaaatgaactttggtgcgagatcaccttcaaggctgac
attcaaaaggagaaggttgatatgacttcattacttgaagcagctgcaagaaagattgta
atgtacgaaactcctcgcatcactcgcggaattcttagcacgagccggaaaccagggagc
gagggccaaatgataatgaagacagagggcgtgaatattccggcggtgttccaataccgt
gacttattggatctgaatcaactctactgtaatgaaatccatgctatataccacacttac
ggtatcgaagctgcctgccgggtcatcatcaaggaaatcagagatgtgttcgctgcgtat
ggcatcaatgtcgactaccgccatctgtccttgatcgccgattacatgacctttgaaggt
caatacaagccctttaatcggcacggcattgaatcgaatgcctcaccactacagaagatg
acttttgaaaccaccatgcacttcttgagggacgctacaatctctggtgcacgtgataac
ctccagtcaccatcagcaaggatagtgactggacagccagtctacactggaactggaagt
tttgaggtcattgtgccactcgtcaaaccaaagtggtga
DBGET
integrated database retrieval system
