Lineus longissimus (bootlace worm): 135486691
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Entry
135486691 CDS
T09977
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135486691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llon03009
]
135486691
Ribosome biogenesis [BR:
llon03009
]
Eukaryotic type
Pre-60S particles
RNases
135486691
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
DUF2737
Motif
Other DBs
NCBI-GeneID:
135486691
NCBI-ProteinID:
XP_064625797
LinkDB
All DBs
Position
4:6909616..6920524
Genome browser
AA seq
1515 aa
AA seq
DB search
MFPSTGYFKAVTCPFFASGLCERQYCHFRHVKPTEPPPPPKDLASSEASVSNTSQNGQSL
LSMVGKAVQHFQKDLEKNIGNVPKKKRKETSDVDPKMNKYLALIAGNDKYKMPETISIPK
ASVDPSPRAVDPSVPQYRPTPISQLKKKRHEPKYVIPYMEEDASESEYDPATNYSTEQRT
KSPPEFEYKPTPLNKKTKIFAEQVAEDGYDPVAEYDPTSEYEPSGEYDPTAVYIPTELDI
CSEPEGNFSDDNDGATAAQKLQKGKKTGSSKTEIGAGKKVKEKVVEDDLVSQIIFASETT
NSMSMSQVKKYSDGSIDFVNEKQIKKKTIKSSKEKVTEQKSEKGLFDLFKSEKKAVVKPT
VSDKAKKCSDGVKTKVLERKDSGSRKHGDDRKKVKSVEGVAKSQSLKSESKDKLIIEKHH
KKHSTHSDSPKSQEKDKRKLSTDNANSSDKNKSKTQTTSDHSGKSRHSHHRTDPHSPKPH
SSKSSKEMENGAKKLVSSKHCGHGSSSSKAKGSKNSEHHKENLNSPKVKHRSESTGSYSH
HQRENKSGSSESNHSTSKVQSPGSYFGFATDSAETAPQTKSESRKSHNITKTLSHSDWNG
SMNETFGFDFHSDFHETRLDTKVEKLGNRVDKHRKSSTSVKSESSSKSKHRLSGGETHTF
KSKHSCSTPTERLGSSKEIKYSISRRDSGTGVDLDESGGSDTLGEEELPTLQIGLDSPYK
KFSWDDIGTCATTSHEKQYQGSKGKSNKSGKPRTKSVSESKDEFIILSSDDESPKKPVKR
PRTMSSGSGSKSGKGSISTFDLFGDDSDNSSDESVNLNARQRSRSSETITYLRGSHASGD
SRTGLSKSAKRRKTVEQSSSDSDGDNFMSLGNDQFDVQNNSDGSEASDARYAGSNGDGLE
LDLDDDDDGEDLYDECLKIFNESPKSKKHQVGKHGMKRKPQEEQAHSVSKANRTAHAGAE
KVVKKKFQRTHVLSPAAVMHNRFVEMQKKLEEAREKRMDLMKDKKSVELSVIFCIQSPGA
RKVEERRGSSLLRKSSQSSPVVRRVSRDIPHPDEPEGPTRIQTIKSVKSGQRKAHVPKLE
HVVETMKRPTIPPDLGGKVPTNVRQRYLNLFVDECLKIYDSQKDAFERALSEEKAVYTRS
GSKNVYLNVAVNAIKKLRNESQASGEPVCSSPAKTSRALIHEYNLGGRKAMETSYTLHRS
SAAKPKQVESFSASHLYHRLKPYILTEEQLQENGFPRVDEDSFNLIKFYNTPRKKSTGKA
LEKACTRCGKRFYIDPSGEWQTLDECIYHWGRAFKKRLCGSIESRYNCCDSDLTSRGCQV
AKLHVYDSNVREVLSGYMKTLPCSPQYDEDYGVYALDCEMIYTTKGQELARVTVVDHRSE
TVYEALVQPEGDVIDYNTRFSGITEDDLKDVTTNLHDVQAVLLSLFNHKSILMGHSLESD
LCALKLIHSTVVDTSVVFPHWLGPPYKRALRHLAGEILNKIIQNDVGGHDSREDAVSCLE
LMLWKVRDDIKKESR
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgttcccatctacagggtatttcaaggccgttacttgccctttctttgccagtggtctt
tgtgagcgtcagtactgtcactttcggcatgtcaaaccgactgaaccccctcctccacca
aaggatctagcctcatctgaagccagtgtgtccaatacctcacagaatggtcagtctttg
ctcagtatggtcggcaaggccgtacagcatttccagaaagacttggaaaaaaatattggt
aatgtgccaaaaaagaaaagaaaggaaacaagtgatgttgatcccaagatgaataagtat
cttgccctaattgctggtaacgacaaatacaaaatgcctgaaaccatctcgattcctaag
gcatctgtggacccatctccgcgagcagttgatcccagtgtacctcagtatagacccact
ccgatcagccagttgaagaagaagaggcatgaacccaaatatgtgatcccttacatggag
gaggatgcgtcggaatcagaatacgaccccgccacaaactatagtaccgaacaaagaaca
aagtcaccaccagagtttgaatataagcctactccactgaataaaaagacaaagattttt
gctgaacaggtagctgaggatggatatgatcccgttgctgaatatgaccccacttcagaa
tatgaaccctcaggtgaatatgatccaacggctgtatacatacccacagagttggacatt
tgtagtgaacccgaggggaattttagtgacgataatgacggtgctactgctgcacaaaaa
ttgcaaaagggtaaaaaaacaggaagctcaaaaacagaaataggtgcggggaaaaaagtt
aaagaaaaagttgtggaagatgatcttgtttcgcagattatatttgcatcggaaactacc
aactcgatgagtatgagccaggttaaaaaatattccgatgggtcaatagattttgtcaat
gaaaagcaaatcaagaaaaagacaataaaaagttcaaaggagaaagtgactgagcagaaa
tctgaaaagggactattcgatttgtttaagtctgagaaaaaggctgtagtaaagcccacc
gtctctgataaagcaaagaaatgtagtgatggtgtaaaaacaaaggttttagaaagaaaa
gacagtggttctcgaaagcatggagatgacaggaagaaagttaaaagtgttgaaggtgtt
gcaaagtctcagtctttaaaatcagaaagcaaagataaacttatcattgaaaaacaccac
aagaaacattcaactcattctgacagtcccaagtcacaagaaaaggataagcgtaagtta
tcaaccgataatgcaaactccagtgataagaataagagtaagacccaaacaacatctgat
cattctggtaagagtcgtcactcccaccatcgtacagatcctcattctccaaagccacac
agttcaaaatcgtctaaggagatggaaaatggtgctaagaaacttgtatcttccaagcat
tgtggtcatggaagttcgtctagtaaagctaaaggaagcaaaaattccgaacatcacaag
gaaaatttgaactctccaaaagtgaagcataggagcgaatcaacgggaagttattcacat
catcaaagggaaaataaatccgggtcgagtgaatcgaatcattccacatcaaaagttcaa
tcaccaggttcctattttggttttgccacagactctgctgagactgccccacaaacaaaa
tctgaatctcgtaaatctcacaatataacgaaaactctttcccatagtgattggaatggg
agtatgaatgaaactttcggttttgattttcactctgattttcatgaaactcgtcttgac
acaaaagttgaaaagctcggaaatagggttgataagcataggaaaagttccacttctgtt
aaaagtgagagcagttccaagtcaaaacatcgattatctggtggagagacgcatacattt
aaaagcaagcacagttgttcaacccctacagagcgactgggaagttctaaagaaataaag
tattctatttcaagaagagattcaggtacaggggttgacttggatgaatcgggaggttct
gatacacttggtgaggaagagctccccactcttcaaatcggcttggattctccatataaa
aagtttagttgggatgacatcggcacttgtgctactactagtcatgaaaaacaatatcag
ggttcgaaaggaaaatcaaacaagtcgggaaaacctcgcacgaagtctgtatcggaatcg
aaagacgagtttatcatattgtcatcagatgacgagtcgccaaaaaaacctgtaaaaaga
ccacggacgatgagttctggttccgggtcaaaatcagggaaaggtagcatcagcacgttt
gatttatttggagatgacagcgacaacagttctgatgaaagtgtaaacttgaatgccagg
cagaggtcaaggagttctgaaactattacttatcttagaggaagtcatgccagtggtgat
agccgtacgggtctttcaaagagtgcaaaacggagaaaaacagtcgaacaatccagtagt
gatagcgacggggataactttatgtccttgggcaatgatcagtttgatgttcagaataat
tccgatggtagtgaagcgtccgatgcgaggtatgcaggaagtaacggagacggccttgaa
cttgacctggatgatgatgatgacggtgaagacctgtatgatgagtgtctgaagatcttc
aatgaatcgccgaaaagtaaaaagcatcaagtcggaaagcacggtatgaaaagaaagcca
caggaagaacaggcgcattcagtcagtaaagccaatagaactgcccatgctggagctgag
aaagtagttaagaaaaagttccaacggacccacgttttgtctccagctgcggtgatgcat
aacagattcgttgagatgcagaaaaagcttgaagaggccagggaaaagcgcatggacttg
atgaaggacaaaaagtctgtagagctttctgtcattttctgcattcagagtcccggcgca
agaaaagttgaggagaggcgaggaagctccttgctgcgaaagtcctctcagtcatcgccg
gttgtccggagggtgtcacgagatattcctcatcctgatgaaccagaaggtccaactcgg
atccagacaattaaatcggtgaaatcagggcaaaggaaggctcatgttccaaagcttgaa
catgtcgttgagaccatgaagaggccaaccataccgcccgacttgggtggcaaggtaccc
acaaatgttcgacagcgctatcttaacctattcgtcgacgagtgcttgaaaatttacgat
tctcagaaagatgcatttgaaagggctttgagcgaagaaaaggcagtctacactcgaagc
ggctcaaaaaatgtctacctcaatgttgccgtcaatgcaatcaagaagctgagaaatgag
agtcaggccagtggtgagccggtctgctcttcccctgccaaaacaagcagagcgctgata
catgagtacaaccttggtgggaggaaggcaatggaaaccagttacacgctgcataggtca
tcggcagcgaaaccaaaacaagtggaatcattctcagcatctcatctttaccatcgatta
aagccatacattctcaccgaggagcaactgcaagagaatgggtttccacgcgttgatgaa
gacagctttaatcttatcaagttttataatacaccgcgaaagaaatcaactggcaaagct
cttgaaaaggcgtgcactcgatgcggcaagaggttttacatcgacccaagtggagagtgg
caaactctggatgagtgcatttaccactggggccgagcatttaagaagcggctgtgtggc
agcatcgagtctcgttacaactgctgtgatagtgatctcacatcgaggggttgccaagtg
gccaagttacatgtctatgactccaatgtgcgtgaagtgttgtcgggatatatgaaaaca
ctgccatgttccccacagtatgatgaagactatggtgtatatgctctggactgtgaaatg
atttacacaacaaaaggtcaagaacttgcccgggtgacggtggtagaccacaggagtgag
acggtttatgaagcactcgttcaaccagagggtgatgtcatcgactataatacaaggttc
agcggtataactgaagacgatttgaaagatgtcacaacaaatcttcatgatgtgcaggcc
gtgctgctgagtttgttcaatcacaaaagtatactgatgggtcacagtttagaaagcgat
ttgtgtgctttgaagcttattcattccacagtcgtggacacctctgtcgtgttcccccac
tggctaggcccgccctacaagagggccctccgacaccttgctggcgaaatacttaacaaa
attatacagaatgatgttggcggccatgatagtcgagaggatgctgtgtcgtgcctggag
ctgatgctgtggaaagtcagagatgacattaagaaggagagccgctga
DBGET
integrated database retrieval system
