Lineus longissimus (bootlace worm): 135486836
Help
Entry
135486836 CDS
T09977
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135486836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135486836
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135486836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
RBD-FIP
Occludin_ELL
FAR1
Motif
Other DBs
NCBI-GeneID:
135486836
NCBI-ProteinID:
XP_064626009
LinkDB
All DBs
Position
4:23564744..23582072
Genome browser
AA seq
2379 aa
AA seq
DB search
MASGGQVSVLLNILEENVYQTLSSEVKDKIKCHLDGLQNTIEELKGATEKLRVDSEQRYF
ELEAQVISSKGQYENEHRKNHELLLAKSTLEENLKATQERIEEAEKQLHQLALDKSQLET
SKTQLELEKTDLMQMLEKKSKETESLYEEWKTISDKVGNANSAKVDALAKLEEIQSREVS
TKHREQKLEQERDHLQMQNTWLEGELTTKTEELLNMRKDLSSRFLEVNSQLEGKTDEVTH
LQNLVEDLRTQNEEKAKRIEAYIQKVNEAREAQLLSEEQFKLELQSQKKLVSLYKSSSEE
SDSRVKELLNAIAELQKIVHESSEVTKKLESEADEKDEEWRLQVRERDETITRQQKELEH
ANDLITIAKRRGGIPLSEEGIEAMSPTAAAASKLLKSGMTLTQIYSEYVQATDALQMEKE
ENRRLNQYLDQILQEIEERTPVMKKQREDYEAAMQTINQMTSQLDTAMIEGEKTRIELDE
NHRRVGNLSRDNKRLQQQTVDLGLQVRMLVKELEEARGTCVSTSQDVANVSVGEVSSSSN
LITEKLVTFRSIEELQEQNQKLLQVVRELSEKREEEDKMTVDAKTSELKKELDVALEELN
DIRAARTRQAEMVESIVRQRDMYRVLLAQTSTTPIPSSPFQTSTPARRAPASPAVQSDSP
ATDKRLKEATSAIKDLQEELATYKKERANNEKLLNDQLDKTRQELSDHRVQNAKLASQLD
YSVERFNIVQKNCESYKKEIAALRDKNQQYTTSIVKHEKSINSLREDLMASQDRLTKSDV
QCQNLKAQLVMVKMTEARLQQEKESMHREQLSQNVLLANLHAIQNNLERQEFEMKTKTKH
QLEAMENESMSLRRQIAMAEGEIKALNRQKEADVGTLEQKLTRETEAHNKTKDELTDAYA
RVHILGQELSTAESKRAATEHKLQQVLQQQDPNARLPDPEAENEEIKDLKAQIEQASSEI
SSLKEQLASAKQHTDQYKSISDSIEVRLKEQNEVSDKFKTNLEARMDAIKQENERLKNLG
GGLEKERHDLLAENIRISEESHNLNAELRRQLASIQHELEEAVKRREEAIVNEQNARTDC
QAQVKVAAEAQDKYEKELIHHASDMEALVQVRKELAGFNEQLNASQEEARKLKMTLESST
TAWQEQEKVMKDEHKKLEYRHRELREQNNLLHQQMEKLSSDVINIQQSRLQSLDVSMTEE
SQKNSEQLLEVIRFLRKEKEIAETKSEYSTAESNRLRQKSEFLEKQVEDLNKNLAEERQI
KQVSVQSAVEHTELMRKVENLNLLTDSNKMLREEKDRLMQQVKEFEAKVQKLEDDIQSLK
ETNRNLTAQKTGVAAEKISLQGEVERWKQRVSNMIEQSNKADPEERKKLIAEKEELRKQL
SQAREELHRVKAEQSRTNMTLNTTLKAKQNEVNTVRQQMESKIAEMTSYKQQIEKLVKDI
NAKKAEIDDKDKKMDESTKTLNQLKRLGRKYRTAAEDCQKEVETLKAQLGKQQALPPPQP
AVTEEQLKAVEHNLTAAQEKMKTMESELAAEKAKLQAAEREKTETQGKVQQLENDVKAQK
EEVAKRDAEVTNKEAEISKRGAEIAKRDAEMEKLKKDAEENQGKDGKIKEEIAELKKKQS
DMLSMLQAAKKRITAQKEAIEKLTGENNDLKSQLESRVNTDEGDSTIKSQFEAQIKELES
QVQAARSVQQTEAANFSSQLDDLKKENTDLQTKIQSLNKELEDTKQKLTQQEASAATIER
QAPAAGKSTPRANIQPISTPSPVTSRQSTSGQPVAGSSGIKATASIRPMAIASTTTPTAT
VMPTLQEQGTVSQSVEEQTEAAPPIAAIQGSPQEPTPSTSKRPREDTETIEEPEPSQQIK
RTRTATDQAEPTSTSENVADAEEAAQLEGADDIGEAAVEEDDAQDNGLGMATIEPLDYLE
EDDGDEVIIVESDDEDADDDDDDDADDDDDEGDESLDEEEFEGDMGAEEGDFPEAISAEE
YEGDEGMEEEEEYGDGEEEMEEHADDDDDSDDVVIVEDDDDNEDAQVGSTGGEGDQSQQT
SSAPDSQQPSTTGVRQIAPLPRLAGRAERLPSAGRAQLTPFSFGTQGSGFEDGDDCTVPS
TPTLSLPKRTDGFAEAVSSPAVPNARFVFGSGSDAAQQSELAQLASQGALGMDDTKMDLS
QYDEGNRVTITSSLSGPPNIVVTSSDGQQIHGETAAPSTQEAGSDQPSVTESRSQETGET
TQVSEVMAISTIGTTISAIGTVGSGPSDSMPSFASLAAEAGDNSENYESYDIQGGARPRI
QRIVWDQPLQRVASQPQQQPPPQGQPISSLARSTPPQGIPPQQRRGQMGQPMARRGQGQR
GIGPQRGGMHRIGGNQQQRGRGQGGQRGTARRSRRPPQY
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggcggccaagtttctgtgcttttgaacattttagaggaaaatgtctatcaa
actctgtcttctgaagtgaaagacaagataaaatgtcatcttgatggtttgcagaacaca
atcgaagagctgaagggtgcaactgaaaagctccgcgttgattctgagcaaagatacttt
gaacttgaagctcaagtgatctcatcaaaaggacagtatgaaaatgaacacagaaagaac
catgaattgctattggcaaagtcgactcttgaggagaatcttaaagcgacccaagagcga
attgaagaagcagaaaaacaacttcaccaactcgcccttgataagagtcagctagaaacg
agcaagacacaacttgaacttgagaagacggatctcatgcagatgctcgagaagaagtca
aaggagacagaatcactctacgaggaatggaaaaccatttccgacaaagttggcaatgcc
aattcagcaaaagttgatgctcttgccaagttggaagaaattcaaagccgggaggtctcc
actaagcatcgagagcagaaattggaacaagagcgtgaccatcttcagatgcagaacaca
tggctggagggggagttgacaacgaagacagaggagctactcaacatgaggaaagatctg
tcaagtcgcttcctggaggttaatagtcagttagaaggaaagacggatgaagtcacacat
ctgcaaaacctggttgaggacttgaggactcagaatgaggagaaggccaagagaattgaa
gcttacatacagaaagttaacgaggcaagagaagcccagctactgtcagaagaacaattc
aaactggagctgcagtcacaaaagaaactcgtctcattgtataagtcttcttctgaggag
tctgacagcagggtcaaagaacttctaaacgccattgcagaactacagaaaatcgtacat
gaatcgtcggaggtgacgaagaaattagaatccgaggcggatgagaaggatgaagagtgg
agattacaagtgagggagagggatgagacgatcactaggcaacagaaggagctggagcat
gctaacgaccttatcacgatagccaagaggagaggtggcatccccctttctgaggagggt
atagaggccatgtcccctactgcggcggcggccagcaaactgctcaagtcagggatgacg
ctgacgcagatatacagcgagtacgtccaagcgacagatgcactgcagatggagaaggaa
gagaatcgtcgcctaaatcaatatcttgatcagattctgcaggagattgaggagcggacg
ccggtgatgaagaagcagagggaggattatgaagcggcgatgcagacgatcaaccagatg
acgagccagctggatactgctatgatcgagggcgaaaagacgagaattgaattggatgaa
aatcaccgccgtgtaggaaaccttagccgggacaacaagcgacttcaacaacaaacagtt
gatctaggtttacaggtgcgaatgttggtcaaagagttggaagaggctcgtggaacgtgc
gtgtcgacatcccaagatgttgccaacgtctccgtgggagaagtttccagttcttccaac
ctgataacggagaaacttgtcacgttcagaagtatcgaagaactccaggagcagaaccag
aagctgttgcaggtcgtgcgcgaactcagtgagaagagggaagaagaggataaaatgact
gtggatgccaaaacatctgagctgaagaaggagctcgatgtcgcacttgaggaactcaat
gacatccgagctgccaggaccagacaagctgaaatggttgagagcattgttcgacaaaga
gacatgtatcgtgttctgctggcccagacatctacaacacctattccaagttcgccattc
cagacatcaactccggctcgtcgagctccagcgtcgccagctgtgcagagtgacagcccg
gccactgacaagagactgaaggaggctacttcagccatcaaggacttacaggaggagttg
gctacctacaagaaagagagagcaaataatgaaaaattacttaatgaccagttagacaaa
actcggcaagaactgtccgaccaccgagtgcagaatgccaagctggcatcccagttggac
tattccgttgagagattcaacatcgtgcaaaagaattgtgagagttataagaaagagatt
gctgcactgagagacaagaaccaacaatatacaacatcgatcgtcaaacatgagaaatcc
atcaactccttgagagaggatttgatggcgtcccaggacaggttaaccaagtctgacgtg
cagtgtcagaaccttaaagctcaactggtcatggtcaagatgaccgaggctcggctccag
caggagaaggaatcaatgcatcgggaacagctatcacagaatgtcttgctggctaatcta
catgctatacagaacaacttagagcgacaagaatttgagatgaaaacgaaaacaaagcac
caactggaggcgatggagaatgaatcaatgtccctgaggaggcagattgctatggcagag
ggtgaaatcaaggcactcaacaggcagaaggaggcagacgtcgggacacttgagcagaag
ttgacgagggagactgaggcacataacaagaccaaggatgaactaacagatgcgtatgca
agggtgcatatcttgggacaagagttatcaactgcggaatcaaagagggcggcaacagag
cataaactacaacaggtcctgcagcaacaggaccccaatgccaggctcccggaccccgag
gcagaaaatgaagaaatcaaggatctcaaggcccaaattgaacaggcatcttcagaaata
tctagtctgaaagagcaactcgccagtgccaagcagcacaccgaccagtacaagtctata
tctgacagcatagaggtgaggctgaaggaacaaaatgaagtcagcgataaattcaagaca
aatcttgaggccaggatggatgcaattaaacaagaaaacgaacgtttgaaaaaccttggc
ggaggccttgagaaggagcggcacgacctcctagcagaaaacattaggatctcagaagag
agtcataacctgaatgctgaattacgacgccagctcgccagtatccaacacgaattggaa
gaagccgtgaaaagacgagaggaggctatcgtgaatgaacaaaacgctcgcaccgactgc
caggcacaagtaaaggtggcagcagaagcacaagacaagtatgaaaaggaattgatccat
catgcgtcggacatggaggcactcgttcaagtcaggaaggagctggccggttttaatgag
cagctcaacgcttcccaggaagaggcaaggaaactgaagatgactcttgaatcgtccaca
actgcctggcaagaacaagagaaggtcatgaaagatgagcataagaagctggagtacaga
catcgagaactccgagaacaaaataatttgctccatcaacaaatggaaaagctgagcagt
gatgtgatcaatatccagcagtccagacttcagtcgcttgacgtctcgatgacggaagaa
tctcagaaaaactcggagcagctgctagaagtgatcaggtttttgaggaaagagaaggaa
atagctgagaccaaatctgaatattccactgctgagagtaacagactgcgccagaaatct
gagttccttgagaagcaggtcgaagatctgaataagaatttagcggaggagagacagatt
aagcaggtgagcgtgcagagtgccgtagagcacacagaactgatgaggaaagtggagaat
ctgaatctgttgactgacagcaacaagatgctgagggaggagaaggatcgcttgatgcag
caggtgaaagagtttgaagccaaggtccagaagttagaggacgacatccagtccttgaag
gagacaaatcgtaatctcaccgcgcagaaaactggtgtggcggcggaaaagatatcatta
caaggggaagttgaacgctggaaacagcgggtcagcaacatgatcgaacaatctaacaag
gcggacccggaggagaggaagaaactgatagcagagaaggaggagttgaggaaacagttg
tctcaggccagggaggagttgcatcgtgtgaaagctgagcaatctcgaacgaatatgacg
ctgaatacgacgctgaaggccaagcagaatgaagtcaatacggttaggcaacagatggag
agtaaaattgcggagatgacatcatacaaacaacaaatagaaaaattagtaaaggacatc
aatgccaagaaagctgaaatcgatgataaggataagaagatggatgagagcactaagact
cttaatcagttgaagaggttgggtcgcaagtaccgaacggcagcagaagattgtcaaaaa
gaggtggagactctgaaagcacagctaggcaaacaacaagcactaccacctccccagcct
gccgtgactgaggaacaactcaaagctgtcgagcataatcttactgccgcacaggagaag
atgaaaacgatggagtcggagcttgctgcagagaaagccaagctccaggcagctgagagg
gagaagacggagacacaaggaaaggtccagcagcttgagaatgatgtcaaggcacagaag
gaagaggttgctaagcgggatgctgaggttacaaataaagaggccgagatttctaagcga
ggtgcggagattgctaagagagatgccgagatggaaaagctaaaaaaggatgcagaggaa
aatcaaggcaaagatggtaaaataaaggaagagatagcagagctgaagaagaaacagtca
gacatgctgagtatgttacaggcagcaaagaagaggatcactgcacagaaagaagcgatc
gagaagttaacgggggagaataatgacttgaagagtcagctggagtctcgggtgaataca
gacgagggtgactcaaccatcaagtcgcaattcgaggctcagatcaaagaactagaatct
caagtccaagctgcaaggagtgtccaacaaactgaagcggccaacttcagtagtcagttg
gacgacttgaagaaggagaatacagacctacaaacaaagattcagtcattgaataaagaa
ctagaggacacgaagcagaagctcactcaacaagaagcctcggctgcaactattgaaaga
caagcgccagccgcagggaagtcgaccccgagggcgaacatccagccgatatcaaccccc
tctcccgtgacgtcccgtcagtcgacatctggtcagccagttgccgggagttctggcatc
aaggccacagcgagtatcagacctatggcgattgcgtccacaactacacctactgccacc
gttatgccaacattacaggagcaaggtacagtcagccagtcggttgaggaacaaacagaa
gccgctccacccattgctgccatccaggggtcacctcaagagccaaccccctcgaccagt
aagcgcccacgtgaggacacagagacaatcgaagagcctgagccgtcgcagcaaatcaag
aggacgagaactgcaactgatcaagctgaacctacctccacatctgaaaatgtagcagat
gccgaggaagctgctcaattggaaggagcagacgacattggtgaagcagctgttgaagaa
gatgatgctcaagataatggactagggatggcaaccatagaaccgctggattacttggaa
gaggacgacggtgatgaagtgatcatcgttgagagtgatgatgaggacgcggatgatgac
gatgatgatgatgctgatgatgatgatgatgagggtgatgagagtctggatgaggaggag
tttgaaggtgatatgggagcggaggagggcgacttcccagaggctatcagtgcagaagag
tatgagggggatgaaggtatggaggaagaggaggagtatggtgatggggaggaagaaatg
gaagaacatgctgatgatgatgatgacagtgatgatgtagtcattgttgaagatgatgat
gataacgaagacgcccaagtgggatccactggtggtgaaggtgaccagtcccagcaaaca
tcaagtgcccccgacagccaacagccgtctacgaccggagtaaggcagattgcgccattg
ccaaggcttgctgggagagcagagagactgccgtctgctgggcgagcacagttgacacca
ttttcattcggtacgcaggggagtggatttgaagatggtgacgactgtaccgtgcctagc
actcctacgctcagcttaccgaagagaactgatgggtttgccgaggctgtcagttcacct
gccgtgccaaatgccaggtttgtctttggcagtggttcggatgctgcccagcagtcggag
ctggctcagttagcttcccaaggagccttgggtatggacgacacgaaaatggacctgtca
caatatgatgaggggaaccgcgttactataacgtccagcctctctggtcctcccaatata
gtggtcacatcatctgatggtcaacagattcatggagagacggcggctccctctacccag
gaagcagggtctgatcaaccgtcagttactgaaagtcggtcacaagagacgggggagaca
acgcaagtttctgaggtgatggccatcagtacgatcggtaccacgatcagtgctattggt
acagtaggatcaggcccctctgactcgatgccaagttttgccagtcttgcagcagaagct
ggagacaacagtgaaaactatgaaagttatgatattcaaggtggtgctcgcccaagaatc
caacggattgtatgggaccaacctttacagagggttgcctcccaaccacagcagcagcca
ccaccacaaggacaacctatctcatcattagcacgcagcaccccgcctcagggaatccct
cctcagcagcgtcggggccagatgggtcaacccatggctcggaggggccaaggacagcga
ggtatcggtccacagaggggcggcatgcataggatcggcggcaaccagcaacaacgggga
cgtggtcaaggaggtcaacgtggtactgctagacgaagtcgacgtccaccacaatattga
DBGET
integrated database retrieval system