Lineus longissimus (bootlace worm): 135486999
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Entry
135486999 CDS
T09977
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135486999
09123 Folding, sorting and degradation
03018 RNA degradation
135486999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135486999
03041 Spliceosome [BR:
llon03041
]
135486999
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135486999
mRNA degradation factors
5'-3' decay
Lsm complex
135486999
Spliceosome [BR:
llon03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135486999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
135486999
NCBI-ProteinID:
XP_064626317
LinkDB
All DBs
Position
4:complement(2849883..2855429)
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AA seq
141 aa
AA seq
DB search
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEAIQNRGRGGRGDGRGRGGPRGGRGGPGRGMLGGGGRGG
GRGGGRGGPPNKPFGKGRGTK
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccttatctcttttacggaccgctgttaaccaccctatgttggttgagttgaag
aatggtgagacatacaacggtcatcttgtcagctgtgataactggatgaatatcaatctc
agggaagtcatctgcacatcaagagatggtgacaggttttggcgaatgccagaatgttat
atccgaggcagcactatcaaatatttacgtattcctgatgaagtgatagatatggtcaag
gaagaggccattcaaaataggggccgtggtggtcgaggtgatgggcgggggcgtggtgga
ccaaggggtggccgcggtggacctggacgaggtatgttgggtggtggtggacgtggtgga
ggacgagggggtggccgaggaggaccacctaacaaaccattcggaaagggccgaggaacg
aaatga
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