Lineus longissimus (bootlace worm): 135487044
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Entry
135487044 CDS
T09977
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
llon03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135487044
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135487044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135487044
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135487044
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
135487044
NCBI-ProteinID:
XP_064626422
LinkDB
All DBs
Position
4:24635809..24651740
Genome browser
AA seq
1566 aa
AA seq
DB search
MSNDGLGKIKQKRKNVPSKPYTRGKSFFGKVKDTVKEILQPSWLGSIVSSLTPARLSESA
PSTPMPPQVKPDSQFSSSTPRRNAYPLNSLHRPSRGLPPPNMYSAVDGNMPFVSYVPNNS
QPSTSTQGPRYDDQINISNYSFSGGLTSAVPAPAERQDESVSLDDSRLRDQPQPRETPRE
HEEESRVRSTPELDTSVLSQRNESSSFFGKPSKRCRTTGPQFNISLFTTPRPLSDRSMMP
GSSFQQSPYYPGKTTYGGAASHRKSRLKATAPYQSNLSVNKVTPRPLNKSLGGTVTSSTA
RKILDALESMPSVLHDAKRIPVNNSSLYDSPLSFTPSSYPRRRSLQPNTSRLGTPAGAPP
TSRVNAVGRASIAQNRQYLLPMREQPSPGTSQPDDGRISSSKSKVWQLPMVDLHPPGRSQ
TEEVVATSLPPVTHVETPQHGSGKMKRDKSHHYQARKDEDDEDVEVPNLPTKFVLPSDGF
KLDIAVKAPQPKSSGPVPEFTFSSPIQKISTPITASPGAATGFQFSSPISIDEQGKDEKH
VMNKNLMPGISFGSSSGLKLKTKPPKEVAPVSSFAPASELKQGSVLDILGKGSVFSSANK
SSAANDTKTPSSVTNVNSFLDKLKPAAGSWECPICMISNKPDVSKCVACMANKPSDRKES
FKSLLDEDIMAKLKPPEGSWSCPTCMVSNKSDADSCVCCSTAKPKLKHSGSSGSSVAIKT
DQTLYENLKRPAGNWECPVCMISNKADASSCLACSSPNPTKSNHAPTKESQNALAKLKRP
EDAWTCDTCLVSNGPTALKCMACETPKPGATKPSGFAQPGGFQFGGNSGSGFVIGNKTSS
SALFAFGGSSKNDADSTPKTSDSAGGGFKFGAVDSSSTAGFKISSSVSGSSGAFKFGGEN
SEKKNSTPSAGFTFGAKTSGAKSDSKPDFVTGGFKFGADSNKDSGIKIGQQASDSKDTLK
PVGGFAFNAGNSDSSKTSALGGVLSNSNKSDPASLGGGSKTTNTSSAAGGFSFGGSTKRK
ADDDDNSEVKKVPEFQFGAPVTAVPSLSQHKQDTAEPKKENGSIGGFAFQPIATATSKPS
TAGFGVGGLDSKAFALEASQASVGKPVQSLFRSSENEPAVKRKPADGLDVSTSLTGAPFL
FGLHTTSITSKLVSPASDVPMSPADIGHPYGLTGGSATSGFNFGSQGSTPTFGQSNSSSS
TPTFGQSATNPTTSAAFNLGGSANPLPVASSTATFNFGAPVSTSATPGFGFGQSASSANP
TATPALTGGFNFSQSTTKPSTTASFSFGQTATTQATTSAAPGGFAFGQSTSGAAQSASTT
STFTFGATATTKAPSFGGFNAAPAQQAAAPAFGAATAPSFGQQQSSAPMPFGTPNTAVTF
GGQSTGTSFSQATPAFGATAPGPTPAFGSAATALPTFGATATKTLTAAPAFGAGSTGFGV
QATPAPAFGAPATTANSSGFNFSQSAQTGAFNFAAQQQQATSAPFQFGANKPTQPTPVAS
QPTATSGFNFTPNMSFGGPAAPATPQPFQFGAAPAPSTDGNPFSVSVTPNIAGRKIKRAT
RKLKGR
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgatggtttagggaaaataaaacaaaagcgtaaaaatgtaccatcaaagccc
tacacaagaggcaagtcgttctttgggaaagtaaaagataccgtgaaggagattctccag
ccgtcatggcttggttctatcgtgtcgagcttgacgcctgccaggttgtccgagagtgcc
ccaagcactccaatgccaccccaggtgaagccagatagccagttttccagcagtactccc
aggagaaacgcttacccactaaactcactgcatcgaccaagccgaggactaccacctcca
aacatgtactcagcagttgatggcaatatgccatttgtgtcttatgttccgaacaacagc
cagccaagtacttcaactcaaggtcctagatatgatgatcaaatcaatataagcaactat
tcattctctggtggtctgacgtcagcagtgccagcgccagcggagcggcaagatgaaagc
gtctctcttgatgacagcagattacgtgaccagccacagccaagagagacgccaagagaa
catgaggaggaatctcgagtacgatcaacaccagagctagacacatcagttctttctcaa
aggaacgagtcttcatctttttttggcaaaccgagtaaacgctgccggacaactggccct
cagttcaacataagtctgttcacaacacctagaccgttgtcagaccgcagtatgatgccc
gggagcagcttccaacagtcaccctattatcctgggaagacaacgtatggtggcgctgcg
tcacatcgcaagtcgagactcaaagcaactgcaccatatcagtccaatctctcagtgaat
aaagttactcccagacctctgaataaatcgttaggtggtaccgtcacaagttctaccgct
cgaaagatcctggatgccttagagagcatgccttctgtactccatgatgcgaagagaatc
ccagtcaacaactctagtctttatgattcaccgttgtcgttcactccaagtagttatccg
aggagacggtcactgcagccgaatacctccaggcttgggacgcctgctggtgcacctccc
accagccgagtgaatgctgtgggtagggcatccatcgcccagaacagacagtacctcttg
cccatgagggagcagccttctcctggaacaagtcagccagatgatggaaggatttcttcc
agtaaatctaaagtgtggcagcttccgatggtggacctgcaccctccaggaagaagtcaa
acagaagaggttgttgctacgagtttgccgccagtcacccatgtggaaacgccgcagcat
ggttcagggaagatgaagagagacaagagtcatcattatcaggcacgcaaagatgaggat
gatgaagatgttgaagtacccaacttgcccacaaagtttgtcctcccatccgatggtttc
aagcttgatattgctgtcaaggcaccacaaccgaaatcatccggaccagttccagagttc
acattttccagtccgattcaaaagataagcactccgattacggcatcgccaggagcagca
actggattccagtttagttctccgatcagtattgatgagcaaggaaaggatgagaagcat
gtgatgaataagaatctaatgcccgggatatcatttggtagttcctctggtctgaaactg
aaaaccaaaccacctaaagaagttgctcctgtcagttcctttgcaccagcatcggagttg
aagcaagggagtgtcctcgatattttagggaaaggttcagtcttctcatcggcgaataag
tcatctgctgcaaatgataccaaaacgccgagttccgttacaaatgtcaactcgtttctg
gacaaattgaagcctgccgctggaagttgggagtgtcctatctgtatgataagcaacaaa
cctgacgttagtaaatgtgtcgcttgcatggcaaacaagccctccgaccggaaggaatcg
ttcaagagtctgttggatgaagacattatggcaaaattaaagccaccagaaggttcttgg
agttgtcctacgtgtatggtctcaaataaatctgatgcggatagttgtgtttgttgtagc
acagctaagccgaaactgaaacattcaggatctagtggttcttcagtggcgatcaaaaca
gaccaaactttgtatgagaatttaaagagaccagctgggaactgggagtgtcctgtgtgt
atgatatctaacaaagcagatgcctcgtcttgtcttgcatgctcctcccctaatccgact
aagtccaatcatgcccctaccaaggagagtcaaaacgcattagcgaaattaaaaagacct
gaagatgcctggacttgtgacacgtgtttggtgtcaaatggaccaactgcgttaaagtgt
atggcgtgtgaaacaccaaaacctggtgcaacgaaaccatccggttttgcccaacctggt
ggttttcaatttggtggtaactctggttcaggttttgtcataggtaataaaacgtcttct
tccgcgctgtttgccttcggcggctccagtaaaaatgacgctgattcaacacctaaaaca
tccgattcagctggaggtggattcaaattcggggcagtggattcttccagcacagcaggg
ttcaaaatctcatcatcagtgtcaggttccagtggggcattcaagttcggtggtgaaaat
agtgagaaaaagaactctacgccgagtgcaggtttcacttttggcgcaaaaacatctgga
gctaaaagtgactctaaacctgactttgttactggtggtttcaaattcggtgcagacagt
aacaaggacagtggtatcaaaatcggacagcaagcttcagattccaaagacacattaaag
cctgtcggtggttttgcatttaatgctggtaactcggactctagtaagacatcagctctt
ggtggtgtgctttcaaattccaataaatcggacccagcatctttaggtggtggtagtaaa
acaactaatacctctagtgcggccggtggattctcgttcggaggaagtacgaagcgtaag
gcagacgacgatgacaatagtgaagtgaagaaggtgcccgagttccagttcggagcacca
gtgactgctgtgcctagtctaagtcagcacaagcaagacacagctgaaccaaagaaggaa
aacggttcgataggaggctttgccttccaaccgatagctacagcaacctccaagcccagt
actgcaggttttggagttggtggattggattcgaaggcgttcgcacttgaagcgagtcag
gccagtgttggcaaaccggtccaatccttatttagaagtagtgagaatgagccggcggtg
aagaggaaaccagctgacggattggatgtctcgaccagtctgacaggagcaccattcctg
ttcgggcttcataccactagcatcaccagcaaactcgtctctccagcctcggacgtccca
atgagtccagctgatattggacatccatatggtttgacggggggcagtgccacgtctggt
tttaactttggttcacaaggctccaccccaaccttcggccagagtaacagctcatccagc
acgccaacattcggacagagtgccaccaacccaacgacaagtgcagcattcaacttagga
ggatctgccaatccattgcctgtcgcctctagtactgcaacattcaattttggtgcgcca
gtctccacatctgcaactcctgggtttggatttggtcagtcggccagttcagcaaatcct
actgccacaccggcattaactggtggattcaacttcagccaaagcactacaaagccatct
acaactgcttcgtttagttttgggcagacggcaacaacacaggccactaccagtgctgcg
ccgggaggatttgcttttggtcagagtaccagtggtgctgcccagtcggccagcacaacg
tccacgttcacttttggagcgactgctacaactaaagccccatcatttggtggttttaat
gcagcgccggcccagcaagctgctgccccggcctttggagctgccacagcaccatccttc
ggtcaacaacaatcctcagcaccaatgcctttcgggactccgaataccgcagtaactttc
gggggacaaagtactggcacttcctttagtcaggccaccccagcttttggtgcgaccgcc
ccaggtccaacgccagcgtttggttctgctgctactgccttgccaacattcggtgccact
gctactaaaactctgacagcagctccagcctttggtgcaggatctacaggtttcggtgtc
caggcaactccagcccctgcatttggtgcaccggctactacagccaactcttctggtttc
aacttcagccaatcagcccaaacaggagcattcaactttgcagcccaacagcagcaggcc
acgtctgcccccttccagtttggcgccaacaaaccaacacaacccaccccagtggctagc
cagccgacagcaacttcaggattcaactttactcccaacatgagcttcgggggacctgct
gcacctgctacgccacaacctttccagtttggtgctgctcctgcacccagtacggatggc
aacccgttcagtgtcagcgtgactcccaacattgctggtagaaaaatcaagagggctaca
cggaagttgaaaggacggtag
DBGET
integrated database retrieval system
