Lineus longissimus (bootlace worm): 135487298
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Entry
135487298 CDS
T09977
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135487298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llon03021
]
135487298
03036 Chromosome and associated proteins [BR:
llon03036
]
135487298
Transcription machinery [BR:
llon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135487298
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135487298
Chromatin remodeling factors
BAF complex
135487298
PBAF complex
135487298
GBAF(ncBAF) complex
135487298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
BRK
Bromodomain
HSA
ResIII
QLQ
HDA2-3
DEAD
Atrophin-1
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
135487298
NCBI-ProteinID:
XP_064626961
LinkDB
All DBs
Position
4:8353234..8375236
Genome browser
AA seq
1805 aa
AA seq
DB search
MASKEESGLMTAPAPSPAYPQELILKAISSMEERGLTNDPRYQQLLNMANMQKNIPQEQR
ATPEPGQGGPQMQGQPPTPGSDDSQSQSSMQGVPNMPDNQQFVQNPQMSQMVGQIMPNQQ
QQGQGPAHGGPPPGPGQPMPGHMNQPPMSNPMVGQANPNMPNQSGTMPSQMSSGQMPGPG
SMPNQMVPNSQMGGPGPGPAPNQMGPMGGQIPNQMPGQMGMGSQMGGPSPGPPVPMPNQM
GGPMHGQNQMGSSLPNQMGGPLPGSGGDMDGPKPCAFSHPQLQQLKAQIMAYKLLSRNHA
LPPHLKILAEGKRVPPQYRPGPGGPAPMGQMGMQQNQAMGGPHPQPGPGQQSRYPQMMGQ
GPLPSQQVMPPQQPRMMAPAMQQPQQQQPSAPHPQQQQQQQGQPPHPQQQSMQMQMHQKQ
NRITPIAKPQGIDPIDILKERENRISSRIALRIKELENLPAVMPEDLKTKAMIELRALRL
LNFQRNLRSDVVASMRKDTTLETALNSRGYKRSKRQSLREARITEKLEKQQKVEQERKRR
QKHQEYLNAVLQHAKDFKEYHRNISGKITKVNRAVMVYHANTEREQRKEQERIEKERMRR
LMCEDEEGYRKLIDEKKDKRLAYLLSQTDEYIENLVMLVRQHKVDIKKKKKKIKKKEKEE
NKKPEPPVTEGNGDEASASGEGAEGTNADGTKRADPRALKDGILDESSNMSDMRIHVIET
ETGRRLTGEDAPLASQVDAWLEMNPGFEVAPRDGKDVESDSDGSDESDDENEEVEEEEQI
DVKAVTKDDDDEYKVAGRNYYGIAHTVSEKVTEQANMMVNGKLKEYQIKGLEWLVSLYNN
NLNGILADEMGLGKTIQTISLITYLMEKKKVNGPFLIIVPLSTLSNWMLEFDKWAPSVVK
IPYKGSPQLRRTLMFQLKGGKFNVLLTTYEYVIKDKAVLSKLRWKYMIIDEGHRMKNHHC
KLTQVLNVHYCAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFALTT
EKVELNPEETLLIIRRLHKVLRPFLLRRLKKEVESQLPDKIEYVIKCDMSALQRFLYRHM
QSKGVLLTDGSEKDKKGRGGTKTLMNTIMQLRKICNHPYMFQQIEEALAEHQGNSTGIIT
GPDLYRSAGKFELIDRMLPKLKRLGHRVLLFCQMTTLMSIMEDYFLYKGYQYLRLDGMTK
SDDRGELLKKFTAPDSPYFIFLLSTRAGGLGLNLQVADTVIIFDSDWNPHQDLQAQDRAH
RIGQQNEVRVLRLMTVNSVEEKILAAARYKLNVDEKVIQAGMFDNKSTSSERRSFLTQLL
TQADDQDDDEDEVPDDETINQMLARTEEEFEIYQSMDIERRREEAKTFGGRKPRLMEDDE
LPTWLLKDEREVERLTFEDEEDKIFGRGSRQRKEVDYSDQLTDKQFLKAIEDGTLDDLEE
ETKVKKKKKGRKRKRNDDDDDDEPPPVKEKVKGEKKRRGRPPVEKMTPNPPRLTKMLKKL
YDVVVNYKDSDQRVLSEAFLQLPSRKDLPDYYEVIKKPVDFKKIKQRILDHRYRSLDDLE
RDVLLLCKNAQAYNIETSLIYEDSIVLQSVFTNARERLEKGGMLPTPDVSDSDEDEEDEE
QNGDDDQGEEQQQQEEEEDREAEKARARKEEKKEKEKEKEKERERERDRDRERERERHDR
DRERAAAEKLQEHNAVHYQHYQRPPHPYTMADAHAYYGQAYPGMSGMPIPPYPVMAGPSA
VRDPMAAMAGMRYPNPHMMEKIRREERTPQPPPLAPEDDSRSRRKGRPLKTRVYISSDED
SDMEM
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaggaagagagtgggctaatgacagccccggcaccaagccctgcctaccca
caagaactcatcctaaaggccatatcttctatggaagagaggggtttaactaatgatcca
agatatcagcaactcttgaacatggcaaacatgcagaagaatataccccaggagcagagg
gctacccctgaaccaggccaaggcggaccgcaaatgcaagggcagccaccaactccaggc
agcgatgactcccagtcacaatcatcaatgcaaggagtccctaacatgccagacaatcag
caatttgtacagaatccacagatgtcacagatggtgggacagattatgcctaatcaacag
cagcaaggccagggtccagctcatggtggtcctccaccagggccgggtcaaccaatgccc
ggtcacatgaaccaaccgcccatgtcgaatcctatggtcggacaggcaaatccaaacatg
ccaaatcagtcgggcacaatgcctagccagatgagctcaggacagatgcctggtcctggg
tcaatgccaaatcagatggtaccaaattcacagatgggaggccctggacctgggcccgct
ccaaaccagatggggcctatgggtggacagataccgaaccagatgcctggtcaaatggga
atgggaagtcaaatgggtggaccatccccaggtcctccggtgcccatgcccaaccagatg
ggtgggccgatgcacgggcagaaccagatggggagctctctgcctaatcagatgggaggt
cctttgcctggatctggaggagatatggatggcccaaagccgtgtgcgttcagtcatccc
caactgcagcagctgaaagctcagatcatggcgtacaaactcttgtcgaggaatcatgct
ctgccgccacatctgaagatacttgccgagggcaaacgtgttccaccacagtacagaccc
ggtccaggagggcctgcaccgatgggtcaaatgggaatgcaacaaaatcaagcaatgggt
ggtccccatccacaaccgggtcctggtcagcaatcccgctacccccagatgatgggccaa
ggtccgcttccctcacaacaagtgatgcctccgcagcagccgaggatgatggcaccggcc
atgcagcagccgcagcagcagcagccatcagctccacatccccaacaacaacaacagcag
caggggcaaccgccgcatccgcaacagcagtcaatgcagatgcagatgcaccagaagcag
aatcgtatcactcctatcgccaagccgcagggcattgatccaatcgatattctgaaggaa
agagaaaacagaatttcctcgcgaatagctctacgaatcaaggagttggagaacctgcct
gctgtcatgccagaagatctgaaaacgaaagcgatgattgaacttcgtgcattgcggttg
ctcaactttcagaggaatctgagatcagatgttgtcgccagcatgaggaaggacaccaca
ctggaaacagccctgaactcgaggggttacaaacgaagtaaacgccagtccctacgcgaa
gccaggatcacagaaaagctagagaagcaacagaaagtggaacaagaaaggaagagaaga
caaaagcaccaggaatatctcaatgcagttcttcaacatgccaaagatttcaaagagtac
catcgcaatatctccggtaagattacaaaagtcaaccgcgctgtcatggtgtatcacgcc
aacacagaacgggaacagcgtaaagaacaggaaaggatcgagaaggagcgtatgcgccga
cttatgtgcgaggatgaggaaggctacaggaaactcattgacgagaaaaaagataaacgt
ctggcctacctcctgtcgcagacagacgaatatatagaaaatttggtcatgttagtgcgg
caacacaaagtcgacattaagaagaagaagaagaagatcaaaaagaaggagaaggaagaa
aacaagaaaccagagccgcctgtgactgagggtaatggggacgaggctagtgctagcggt
gaaggtgccgagggcaccaacgccgatggaaccaaacgtgcggatcctcgcgcactcaag
gacgggatcctggatgaaagttctaatatgagtgacatgcgaatccatgtcatagaaaca
gagactggaagacgccttactggagaggatgccccgcttgctagtcaagttgatgcttgg
cttgaaatgaaccctggctttgaggttgcgccacgtgatggtaaagatgtcgagtctgac
tctgacgggtccgatgaaagtgacgatgaaaatgaagaagtggaggaggaggaacagatt
gatgtcaaggctgtaactaaagatgatgatgatgaatataaagtcgctggcaggaattat
tatggtatcgctcacaccgtcagtgagaaagtgacagaacaggccaatatgatggtcaat
ggtaaactcaaggagtatcagattaaaggtttggaatggctggtgtctctgtacaacaac
aatttgaacggcatcctggccgatgagatgggccttggtaaaactatccagacaatctcc
ctgattacttacctgatggaaaagaaaaaggtcaatgggcctttcctcatcatcgtgcca
ttatcaaccctctctaactggatgctggagtttgacaagtgggcaccatcggttgtcaag
atcccgtacaaaggctcaccacagcttaggcgaactctcatgtttcagctgaagggcggc
aagtttaacgtgctcctgacgacttatgaatacgtcatcaaagacaaggcggtcttatcc
aagttgcgttggaagtatatgatcatcgacgagggccacaggatgaagaaccatcattgt
aaactcacccaggtgttgaacgtccattactgtgctccacacaggttactgctcacagga
acaccattacagaacaaattacccgagttgtgggcattgttgaacttcttgttacctagt
atcttcaagtcgtgctcgacgtttgagcagtggttcaatgcgccgtttgccttgaccacg
gagaaggttgaactgaatccggaagagacgctgctgatcatccgacgtctgcacaaagtg
ctgcgtccgttcttgctgaggcggttgaaaaaggaggtcgagtcgcagctgccagataag
attgagtatgtgatcaagtgtgacatgtcagccctacagcggttcctctacagacacatg
cagagcaagggcgtcttgctgacagatggatctgaaaaagacaaaaagggtcgtggcggt
accaagacattgatgaacaccatcatgcagctgaggaaaatttgtaatcacccgtacatg
ttccaacaaattgaagaagcgctagctgagcatcaagggaattcaacaggaatcattact
gggcctgatttgtacagaagtgctggcaagtttgaattgatcgacagaatgctgcccaaa
ctgaagcgtttgggtcatcgtgtgctactcttctgtcagatgaccacactcatgagcatt
atggaggattacttcctttacaaaggttaccaatatctacgcctcgatggtatgacaaag
tccgatgatcgaggggaactactcaagaagttcacggcacctgattcaccatacttcatc
ttcttgttgagtaccagagctggaggtctcggcctgaatcttcaggttgccgacactgtc
atcatctttgactcggattggaatcctcatcaggatctgcaagcccaggatagggcccat
cgtatcggacagcaaaacgaagtccgagttctccgactgatgacggtcaattcggtcgag
gaaaagattctggccgcagcaaggtacaagttgaacgttgatgagaaggtcatccaagct
ggtatgttcgataataagtcgacatcatcggaacggcggagtttcctcacgcaactgctg
acacaagctgatgatcaggatgatgatgaagatgaagtgccagatgacgagacaatcaac
cagatgcttgcgcggacggaggaggaatttgaaatctaccaatcgatggatatcgagcgg
cgacgggaggaggcgaagactttcggcgggaggaagccgaggttgatggaagacgacgag
ttaccaacgtggctactcaaagatgaacgcgaggttgaacgtctgacgtttgaggacgag
gaggataagatatttggacgaggttcgcgacagaggaaggaggttgactactctgaccag
ttgactgataaacaatttttgaaggccattgaagatgggaccctcgatgacttggaagaa
gagaccaaggtcaagaagaaaaagaagggacgaaagaggaaacgcaacgatgatgatgac
gacgatgaaccgccaccggtcaaggagaaagtgaaaggagaaaagaaacgacgcggcagg
cccccggttgagaagatgacaccaaatccacctagactcaccaagatgttgaagaaactg
tatgatgtagttgtcaactacaaggacagtgaccagcgagtcctgagcgaggcattcctt
cagctgccctccaggaaagacctaccggattattatgaggtgatcaagaagcctgtcgac
tttaagaagatcaagcaaaggatcttggatcaccgctaccgcagcctggacgaccttgaa
agggatgtccttctcctgtgcaagaatgcccaggcatacaatatcgaaacctctctgatc
tatgaagattccattgtgctacagtctgtgttcaccaatgcccgtgagcgcctcgagaag
ggcggcatgcttccgacccccgatgtctccgacagtgacgaggatgaagaagacgaggag
cagaatggtgatgacgatcagggagaagagcagcagcaacaggaagaggaggaagataga
gaggctgagaaagcgagagccaggaaggaagagaaaaaggaaaaagagaaagagaaagag
aaagagagggaacgagaacgcgatcgagatcgagaacgagaaagggaaaggcatgacaga
gacagagaacgagctgcagcagaaaagttgcaggaacacaatgctgttcactaccaacac
taccaacgacctcctcacccatacacaatggcggacgctcatgcctattacggccaggcg
tatcccggcatgtctgggatgccaatcccaccatacccagtcatggcaggacccagtgct
gtcagggaccctatggccgcaatggcgggtatgagataccctaatcctcatatgatggag
aaaattagaagggaggagaggacgcctcagccgccacccctagcaccagaagatgattcg
aggtcacgaaggaagggccggccgttgaaaacccgggtgtacatcagcagtgatgaagat
tccgacatggaaatgtaa
DBGET
integrated database retrieval system
