KEGG   Lineus longissimus (bootlace worm): 135487461
Entry
135487461         CDS       T09977                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
llon  Lineus longissimus (bootlace worm)
Pathway
llon03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:llon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    135487461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llon03021]
    135487461
   03036 Chromosome and associated proteins [BR:llon03036]
    135487461
Transcription machinery [BR:llon03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     135487461
   Coactivators
    SAGA/TFTC/STAGA complex
     135487461
Chromosome and associated proteins [BR:llon03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     135487461
    STAGA complex
     135487461
    TFTC complex
     135487461
    SAGA complex
     135487461
    SLIK complex
     135487461
SSDB
Motif
Pfam: TFIID_20kDa TFIID-31kDa CBFD_NFYB_HMF Histone TAF4 SecA_SW TAF10 DUF5814
Other DBs
NCBI-GeneID: 135487461
NCBI-ProteinID: XP_064627210
LinkDB
Position
5:5785204..5790940
AA seq 228 aa
MNSANSPRSRPIMEPQLARAPMPGMPMAMGAPMMRPMASSPGGHMAMNSGHIAQPHPISQ
MSLSPRPPMGPPPLVATPTLPNSNHVVSQPQPVPTTPISLSTTNVMTTSTVSSVPSMSTD
SKVLDKRRIQELVKEVDPLEQLDDDVEEVLMTIADDFIDNVVNNACILAKHRKANSLDVK
DVQLHLERNWNMWVPGFGSEEIRPYKKATTTEAHKQRMALIRKTMKKY
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaacagtgctaattcacccagaagtaggccgatcatggaacctcaacttgctcgtgcc
ccaatgccaggcatgcccatggccatgggtgctccaatgatgaggcccatggcctccagt
ccaggtggtcacatggcaatgaacagtggccacatagctcagcctcatcctataagtcag
atgagtctctctcccaggcctcccatggggccacctccattggttgccacccctacttta
ccaaacagcaatcatgttgtttctcagccacagcctgtgccaaccactccaatctccctc
tcgactaccaatgtgatgacaactagcactgtgtccagtgtgccctccatgtccactgac
tctaaggtgttggacaagcgacgtatacaggagttggtaaaggaggtggatccattggaa
cagttggatgatgacgtggaggaggttctcatgacgatagcagacgacttcattgacaat
gttgtcaacaatgcatgtatattggccaaacatagaaaagcaaattctttagatgtgaag
gatgtacaattacacttagaacgtaactggaacatgtgggttcctggctttggttctgaa
gaaatccgcccatacaaaaaggcaacaactactgaggcacacaaacagagaatggctttg
atacgaaaaactatgaagaagtattga

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