Lineus longissimus (bootlace worm): 135487538
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Entry
135487538 CDS
T09977
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llon03009
]
135487538
Ribosome biogenesis [BR:
llon03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135487538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RVE6
Motif
Other DBs
NCBI-GeneID:
135487538
NCBI-ProteinID:
XP_064627386
LinkDB
All DBs
Position
5:complement(5817038..5842447)
Genome browser
AA seq
2730 aa
AA seq
DB search
MKSKPTRHKEQNTFKFLTFAERLTGINIDVVRRIGKRAEVPEECGTFFTEGLQKWSELNC
TEHFTNFSKEITNQVQSLPQLIHHEEQIITALRTHLQVPQSMALQPILDLVVQLARDLQV
DFYPHFPGFFSIIVGLLGSYHHDVECLEAIFTCLSYLFKFLWRYMINDVENVYTQYAPLL
RAEVRWYIRNFAAESFAFLMRKTRDWDVFFNFMLKRLESDPEEVPGVGRLFFEMMKGVKK
QLHSCTEEVLTLLTSKLGEETERESLPYEHICEALKVTIESLAEHAGKEHIGLVWKILLK
CLTDAFDKFDKASRKESSGIADHVHNILELVLVLVKYKDGALIVDTDQMAKCLMVMLEGK
PLPEGYGRTLLEVISSVLMSPHTHLKSDVTPKLINLTFKSKYSRSLTMDFAQGLFSLSSF
EKDVLPLLLNYCHSCMLLRDKSAKDDVLFLITELILNKSPIQRDAAQLNEYSTYLLDFSM
AMKGKNEKKSFPNFVISILEDGITEDCDKSKLWGALVCAPHVRPMKDEVLTEAVLAIYQT
LLKNLEDKKENESFLLCQSLVMLLCLKESEDFFEMVSLEDILTALRCWPADVHVLRAADA
FFTHATNCDQPFMTEATLVEIFKIVDSNISSCYHQVRLLTLRILSQFDAKMPILEDQNME
QVCVFTICLEAEKVPLSVQNYREKLIYLRKLEHGSVQNNLPMEPLFAKVPLKYLLSNLYV
NFTLLWDPVGKLIESHARVLSKEAFWSVYEDQLNMATDLAERAALECKPAPNRSGDPVTV
ENLGDRFVQCQEEVKNSKDRPDHMNYRQLLWKTMQNFPDKCEPRSRILSPLLFRFLNNEY
YPADQTAAPHQDIRKTKDQIADDMAMDMTLTSGETTDEDLQEDEKADAEEENVTAKRSRR
QIARSFLVLLKLFSKFKGPKSLHMEPKLRELYHEMLCHRDGEIQKVAFDCVMTYNNKSIV
PYKEHFEKLLDDKHFKNEIVLFNIDSEASVVQRDHRVEVLPVLMRLLFGKMLGKAGRNTA
GKDQSTKRKNIILAFLGGCQQSELHLFIDLMFAPFKQFVTGDIIERLTELTTDVDTSCVI
PVGKLQGIIHTMDIIFKKLGNLIDSHLPNMLRITLCLTAMCHKLLEMRDQIKGRVINALK
TLRMLCMNRVTQFFISFENYPFTTVEIDAVFLAAVWPQLSRLPDESISHPTPLLKLLYTW
SGEARYLQLLGKFQKGNEELTPLPYIIALLSSKNVARSVVSMVLEIVERLITFEEPIEAE
DDAVVPMEVTDCFGSQEDSSCPENSSLGVRLMFPHVPKVLEYLSGVVRALTGQRSKKHKI
PAKDLNILSNISLYVTDQEQSATVVSLLLPYLVRDFMRSENVEVDILTTVANLIKKLDSP
GRFIVTISKLFSTLSGRTSRNTLCHVMKAIAEKDPTYEKLATTVSNLSAWDKRRVDEPDY
ILRLDTYAEIKTAIKEMETIDVEYLIMVMHNCAFVLTTTDDMSLRDSSSYCMQEIIGRLS
SIELDDKTYNATVVETLLPLIKSGIKSQSEVPRHEFIKVLAMAVRAFPQHSALNHLSKLT
DTDIEVDFFENICHIQTHRRARGLKKFIKHLANHPIPANILLSYVMPMASVYITCPEYAK
QHNLVDTAIEAIGCICKLLPWSKYLQLLKSYLYLLPKSIENQKTMVKLVVSILNAFHYDL
SATQGAGDVLKPPVNDAVKKTKPVLEYVEEKPADDIVEDSDEEADVKEPGADDTQDDTSA
ETQTVVDGIVKCSRELATRIHQTVVKSIVPDLRNCLIEKAKSDDEHKAAKSKYAEDSEIL
RVPIALAMVKLLQRMPKGVLNVYLPSVLLKVCAFLRSRAKDIRDVARDTLIKIMSSLGNK
YFNYILKELRAALRRGYQLHVLGYTVHALLKNMEPQLKAGDLDSSLENLTEIFNEELFGA
VSAEKEVDGIVGKLMEAKSIKSFDSYEMVSRFVGKASITKIILPLKEILETNQNHKVTKK
VETLLHRITLGLMENKDLPVETQMVFVHGLVNETMPLVTSSEKAKKEAPKPQDTRLQPQS
TYLIPKAPPRGGVKATNTLKTNLHVLVEFGLQLLHYLLKRSSLVPSKIEHLQMLDPFITI
MTECIKSKHVKIATLALRCLSWVFKFELPSLKENITKIASSLFVLLKNYAVAGGAKGENF
DLVVVCFKAVTVLVRDVKYHVINTEQLQILLGYAEEDIHDYTRQATAFSLLQAILSRKLH
IPEMVDVMTKISKLSITSDSPHVRRQCRQVLMQFLVNYPLGTKLKRHLEFFVMQLNYELE
SGRDSVLELLATIFTSFPVQIVDEYAGMFFVPLASRLINDESSECRKKAALVIKTLLAKV
DNARRDELFTVTLSWCGDQKGVHRQLGLQLIGLFVEVESTKFDGRLQNAIPLVVDNMEPS
KYTSCSDDVDVRNSDHLLFITLSTLIKIFKECGVVRDSKWTEHVNKIWDYTIELLLYPYT
WVRLASAQLLGLMFGAWKPEELTSADETTTPKAKKKKVVSEYLKVDTRNKLRTIAAQCIS
QFQSQVDQDLAEQIIKNLVFLSKAIRVITSQEPPSDETELTTLHLQWLTKKMTREAKFEA
TTNPKVTLKRSSVFKWMAAVSVDLGSDHLPEFLPFMLPPLFRETTDSSSAADESLKVLGN
EVIEMMKGIVGVETFTKNYAGVQQDVFTKREERKRQKAVNVVSNPEAAARKKMKKHLAKR
DAKKRKIAEFRPAKKAKKLKLQNIAMLEES
NT seq
8193 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgaagccaacacgacataaagagcaaaatacattcaagtttctaacatttgct
gagcggcttacaggaatcaacatcgatgttgttcgtcgaattggaaagcgtgctgaagta
cctgaggagtgtggtacattcttcactgaaggtctacagaaatggtcagaactcaactgt
acagagcatttcaccaactttagcaaggagatcaccaatcaggttcagagtttacctcag
ttgattcatcatgaggaacagatcatcactgccctccgcacacatttgcaggtgccacag
agtatggcactgcaacctatcctggacttggttgtccaactggcacgagaccttcaggtt
gacttctatccccacttccctgggttcttcagtatcattgttggcctacttggctcatac
caccatgacgttgagtgcttggaggcgatattcacctgcctgtcgtatcttttcaaattc
ctgtggcgttacatgataaatgatgttgaaaatgtctatacacaatacgctcctctgttg
cgagctgaagtgagatggtacatcagaaactttgctgcagaaagttttgctttcttgatg
agaaagaccagagactgggacgtgttcttcaatttcatgttgaagcgtcttgagagtgat
ccagaggaggtacctggtgttggtcgcctcttctttgagatgatgaagggtgtcaagaag
cagttacacagttgtacagaagaagtgctaactcttctgacgtcaaaactcggtgaggaa
acggagagagaatccctcccctatgaacacatctgtgaggcgttgaaagtgaccatagaa
tctcttgctgagcatgctggtaaagaacatattgggctggtgtggaagatcttattgaaa
tgtcttactgatgcctttgacaagtttgataaggcttcacggaaagagtcctctgggata
gcagaccatgttcacaatatccttgaattagttttggtgctggtcaagtataaagatggt
gctttgatagtggatactgaccaaatggcgaagtgtctgatggtgatgttggaagggaag
ccattgccagaaggttatggaagaactctcctagaagtcatctcctctgtcctcatgtcg
ccacacacacacctgaaatcagatgtcactccaaagctgattaatttgactttcaagagc
aagtattccagaagtttgaccatggatttcgcgcagggtttattttcattgagttcattt
gaaaaggatgttctgcctctactgttgaattactgccattcctgtatgctgctgagagac
aaatcagccaaggatgatgttttgttcctcatcactgagttaatcttaaataagagtccc
atacagagggatgctgcacagctgaatgagtacagcacgtatctcttggatttctctatg
gcaatgaaaggcaaaaatgagaagaaatctttcccaaattttgtgatatcaatcctcgaa
gatggcattaccgaagactgtgataaaagtaaactttggggcgccttagtctgtgcacct
catgttagaccgatgaaggatgaggtcttgactgaggctgtgttagcaatttatcagaca
cttcttaagaacttggaagataaaaaagaaaatgaatcatttctcctgtgccaatcatta
gtgatgttgctctgtctgaaagaatcagaggatttcttcgaaatggtttccttggaggac
attttaacagcgttaagatgttggccagcagacgtccatgtcttgagagcagcagacgca
ttcttcacccatgccacaaactgtgatcaacccttcatgactgaggccacccttgttgaa
atcttcaaaatcgttgatagtaatatatcatcatgttatcaccaggtgcggttgctgaca
cttcggatactgtctcagtttgatgcgaagatgcccattctagaagatcagaacatggaa
caagtgtgtgtgttcaccatctgtctggaagcagagaaggtgcctctctctgtgcagaac
tacagggaaaagttgatttatctcaggaagctagaacatggatctgtacagaacaatcta
ccaatggagcctttatttgctaaggttcctctgaagtatcttctaagtaatctctacgtc
aacttcacgttactgtgggatccagtcggcaaattgattgagtcacatgccagggtactt
tcaaaggaggcattctggtcggtctatgaagaccagctcaacatggctactgatttagca
gaaagagcagctcttgaatgtaaacctgcaccgaaccgtagtggagatcctgtgacagta
gaaaatctcggggatcgttttgtacagtgccaggaggaggtcaagaatagcaaagatcga
ccagatcatatgaactacagacaactcttgtggaaaaccatgcagaacttccctgataaa
tgtgaaccgagatcgaggattctttctccactgctgttcaggtttctcaacaatgaatat
tacccagctgaccagacagctgctccccatcaagacatcaggaaaacgaaagatcagata
gcagacgacatggccatggatatgaccttgacctctggggaaacaacagatgaggacttg
caagaggatgaaaaggcagacgctgaggaagagaacgtgactgctaaaagatcgagaagg
cagattgcgaggtcattccttgttcttctgaaactgttttctaagttcaaaggcccgaag
tctcttcacatggaaccaaaactaagagaattgtatcacgagatgttatgtcatcgggat
ggagaaatccagaaagttgcatttgactgcgttatgacttacaacaacaaatcaatagta
ccttacaaggagcacttcgagaaactgcttgatgacaaacacttcaagaatgagattgtt
ttattcaacatcgacagtgaggctagtgttgtgcagcgtgaccacagggtagaagttcta
ccagttctaatgaggttactatttggtaaaatgcttggtaaagcaggccgcaacacggca
ggaaaggaccagtcgaccaaacgcaagaacatcatcctggcattccttggaggttgtcaa
cagagcgaactccatctgttcatagatctcatgtttgcgccattcaaacaatttgtcact
ggagatatcattgaaagattgaccgagctgaccacagatgttgataccagttgtgtgata
ccagttgggaaactacaagggatcatccacaccatggacatcatcttcaagaagctcggc
aacctgatcgattcccatcttcccaacatgttacggataacactctgtctgacagcaatg
tgtcacaagctacttgagatgagagatcagatcaagggacgtgtcatcaatgccttgaag
acacttcggatgctctgtatgaaccgagtaacacaattcttcatatcgtttgagaattat
cctttcactactgttgaaatagatgctgtttttcttgctgctgtctggccacagttatca
aggttacctgatgaaagcatcagccatcccaccccacttctgaaactcctctacacctgg
agcggcgaagcaagatatcttcaactccttgggaaattccagaaaggaaatgaggaactt
acaccgttaccgtacatcattgcattgttgtcgtctaaaaatgttgccagatcggttgtg
agcatggtgctggaaatcgttgaacgtctcattacctttgaggagcccattgaagcagag
gatgatgctgtggttccgatggaagtgactgattgttttgggagtcaagaggatagttcc
tgtcctgagaactccagtcttggtgtgcgcctcatgtttcctcatgtaccaaaggtccta
gaatacctgagtggtgtagtgcgtgcactgacaggccaaaggagcaaaaaacacaagatt
cctgcaaaagatctcaacattctctcaaatatcagcttgtatgtgacagaccaagaacag
agcgctactgttgtttccttgttgttgccatatcttgttcgggacttcatgcgctcggag
aatgttgaagtggacatcctcacaactgtcgcaaatctgataaagaaattggactcacct
ggtcgatttattgtgaccatttccaagctgttctccacactgtcaggcagaacctcaaga
aataccctgtgccatgtcatgaaggctattgctgagaaagatccaacttatgaaaagcta
gctactacagtgtccaatttgagtgcctgggataagcgccgtgttgatgaaccagattac
attctcaggttggacacctacgccgaaatcaaaacagccatcaaagagatggagaccatt
gatgtggagtatctcatcatggtcatgcacaactgtgcatttgtcctcacaacaactgat
gacatgtccctccgagatagttcatcctactgcatgcaggagatcatcgggagactgtcc
agcattgagttagatgacaaaacatacaatgcaactgtcgtggaaacgctcctacccttg
atcaaatcaggcatcaagtcacaaagtgaggtgccgagacatgaattcatcaaagttctt
gctatggccgtcagggccttccctcagcacagcgctcttaatcatctcagtaagctgaca
gacacagacattgaggtggatttctttgagaatatatgtcatatacagacacatcgtcga
gctcgtggcctgaaaaaattcatcaagcatttagcaaaccacccaatccctgccaacatc
cttctctcctacgtgatgcccatggcctctgtctacatcacatgtccggaatatgccaag
cagcacaacctagtcgacacagccattgaagctattggatgcatctgtaaattactaccg
tggtcaaaatatctgcaacttctcaaatcgtacctttacttgttgccaaagagtattgaa
aaccaaaaaactatggtcaaattagtagtatcaattttgaatgccttccactatgatctg
tctgccacccagggagctggggatgtattgaagccgccagtcaatgatgcagtgaaaaag
accaaaccagtccttgaatatgttgaggaaaaaccagcagacgacattgttgaagatagt
gatgaggaagcagacgtgaaagaacctggagcagacgacacccaggatgacacgtctgcc
gagacacaaactgttgtggatggcattgtcaagtgttcacgtgaacttgccacgcgaata
caccagacagttgtaaaaagtattgtgcctgacctgagaaattgtcttattgaaaaggca
aagagtgatgatgagcacaaggcagccaagagtaaatatgctgaagatagtgagatctta
cgagttcccattgccctggccatggtcaagttactacagaggatgccaaagggggtgctc
aatgtgtatttaccaagtgttctgttgaaagtgtgtgccttcctgcgttctcgtgccaaa
gacatccgagacgtagcgcgtgatactctcatcaagatcatgtcgtcgctagggaacaaa
tacttcaattacatcctgaaggagctcagggcggccctcaggagaggctatcagcttcat
gtccttggctacacggttcacgctctcctgaagaacatggagccacaactcaaggccgga
gatcttgattcctccctggagaatctcactgagatcttcaatgaggagttattcggtgca
gtcagtgctgagaaggaggtggatggcattgttgggaagctgatggaagcgaagagtatt
aaaagttttgactcgtatgaaatggtttctagatttgttgggaaagcatcaatcacgaag
attatacttccattgaaagagatcctagagaccaaccagaatcacaaggtgactaagaaa
gtggagacgttactgcataggatcaccctgggtcttatggagaataaggacctgccagtg
gagacgcagatggtctttgtccatggacttgtcaatgagaccatgcctcttgtaacctca
agtgaaaaggcaaagaaagaagctcccaagccacaggacacccgtctgcagccacagagt
acatacctcattcccaaagcccctccaagaggtggtgtgaaagctaccaatacacttaaa
accaacttacatgtactcgtggaatttggtttacagttgctgcattacctcctgaaacga
tccagcctagtgccgtcaaagatcgaacatctccagatgcttgacccgttcatcacaata
atgacagagtgcatcaaatcaaaacatgtcaagattgccaccctagctttgcgatgtctg
tcttgggtgttcaagtttgagcttccgtcattgaaggagaatatcacaaagattgcctcg
agtttgttcgtcttgttgaagaattatgctgtggctggtggagccaagggagaaaacttc
gaccttgttgtagtttgcttcaaggctgtgactgtccttgttcgagatgttaagtaccac
gtcatcaacaccgagcagctgcagatcctgctgggatatgctgaggaagatatccatgat
tacaccaggcaggcaaccgccttctcccttctccaggccatcctatctcgcaagctacac
ataccagaaatggtggacgtcatgacgaaaatatcaaaactatccatcacgtctgattct
ccgcatgtcagacgccagtgtcgccaagtcctcatgcagtttctcgttaattacccgctc
ggaaccaagctgaagcgccacctggaattcttcgtgatgcagctgaattatgaactagaa
tctggacgggattcagtccttgagctgctggcaacaatcttcacaagctttccagtccag
attgtcgatgaatatgctgggatgttcttcgtgcccctggcttcgaggttgatcaacgat
gaatcatcagaatgtcggaaaaaggctgcattagttatcaaaacattactggcgaaggtt
gataatgcacgtagagatgaactcttcacagttacattgagttggtgcggcgatcaaaag
ggcgtccatcgtcaactgggcctgcagctgattggtctgtttgtggaggtagagagcacc
aagtttgacggccgcctgcagaatgcaataccattagttgtggataatatggaaccaagc
aaatacacttcgtgctctgatgacgttgacgtgagaaacagtgaccatctgctattcata
acactctccactctcatcaagatattcaaggagtgtggtgttgtgagggattcaaagtgg
acagaacatgttaacaaaatatgggattataccattgagctcctcctctacccttacacc
tgggtaagacttgcatctgctcagttactgggcttgatgttcggtgcgtggaaacctgaa
gaactcacatctgctgatgagactacaacaccaaaggcaaagaagaagaaagtcgtttca
gagtatttgaaagtcgatacaagaaataagttgaggacaattgctgctcagtgtatctct
cagttccagtctcaagtggaccaggatctagcagagcagatcatcaaaaatttggtattt
ctgtccaaggcgatccgagttatcacatcccaagagccacctagtgatgaaacagagctc
accactctacatttacagtggctgaccaagaaaatgacaagagaggccaaatttgaagct
acgacaaatccgaaagtaacattaaagagaagcagtgtgttcaagtggatggctgccgta
tctgtggacctcggatcagaccacctccctgagtttctgcctttcatgcttccaccgctg
ttcagggagacgaccgactcctcgtcagctgctgatgaaagtttaaaagtcctcggcaat
gaagtgatagagatgatgaagggaatagtcggcgtggagacgttcacgaagaattacgct
ggagttcagcaggatgtattcaccaagagagaagaaaggaagaggcagaaagcggtgaat
gttgtgtcgaacccagaggcagccgctcgcaagaaaatgaagaaacatcttgccaaacgt
gatgcaaagaaacgaaagattgccgaattcagaccagccaagaaggcaaagaagttgaag
ctacagaacattgcgatgttggaggagagttag
DBGET
integrated database retrieval system
