Lineus longissimus (bootlace worm): 135487546
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Entry
135487546 CDS
T09977
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03082
ATP-dependent chromatin remodeling
llon03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135487546
03083 Polycomb repressive complex
135487546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llon03036
]
135487546
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
135487546
Histone modification proteins
HAT complexes
HATB complex
135487546
HDAC complexes
Sin3A-HDAC complex
135487546
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
135487546
PRC2.2
135487546
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
135487546
Heterochromatin formation proteins
Other heterochromatin formation proteins
135487546
Chromatin remodeling factors
NuRD complex
135487546
NuRF complex
135487546
NuRF complex (fruit fly)
135487546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
MIOS_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
135487546
NCBI-ProteinID:
XP_064627399
LinkDB
All DBs
Position
5:complement(22961038..22965272)
Genome browser
AA seq
435 aa
AA seq
DB search
MADKEGGGGFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSIHRLILGTHTSDEQNHLLIASVQLPNDNAQFDASHYDSEKGGENMEFGGFGSVSGK
IEIEIKINHEGEVNRARYMPQNPCVIATKTPSCDVLVFDYTKHPSKPEPSGECSPELRLK
GHQKEGYGLSWNPNLNGCLLSASDDHTICLWDITQAAQSKEKQNLDAKTIFTGHTAVVED
VSWHLLHESLFGSVADDQKLMIWDTRSNNVAKPSHTVDAHTAEVNCLSFNPYSEYIFATG
SADKTVALWDLRNLKLKLHSFESHRDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE
EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE
DPDPPASELEPSSTS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaggaaggaggaggcggttttgatgatgctgtggaagagagggtcatcaac
gaagaatataagatatggaaaaagaatacgcccttcctctacgaccttgtcatgacgcat
gccttggaatggccaagtctgacagctcaatggttacctgatgtcacaagaccagaagga
aaggactactctatccacagattaatcttgggaacgcacacctcagatgaacagaatcac
ctactcattgctagcgttcagctcccaaacgacaatgcacaattcgacgcgtcacattac
gacagtgagaaaggaggtgagaatatggaatttggcggatttggatcagttagcggaaaa
atagaaatagaaatcaaaatcaatcatgagggcgaggtgaaccgagcacgatatatgcca
cagaatccgtgtgtgattgcaaccaagacgccgtcttgtgatgtacttgtcttcgactac
acgaaacatccatcaaaacctgaaccaagtggagaatgcagccccgagctgcggttgaag
ggacatcaaaaagaaggatatggtctttcatggaacccaaatctgaatggatgtttactg
agcgcatctgatgatcataccatttgtttatgggacatcacccaagcagcacaatccaaa
gaaaaacagaatctggatgcgaagacaatatttacaggacacacagctgttgttgaggat
gtctcctggcatttacttcatgaaagtctgttcggatcagtggcggacgaccaaaaactt
atgatctgggatactcgatccaacaatgtcgcgaaaccaagccacacggtcgatgcccat
acagctgaagtcaactgcctttccttcaacccctatagcgagtacatatttgcgaccgga
tcagctgacaagaccgttgcattgtgggatctccgcaacttgaaattaaaattacattca
ttcgagtctcacagagatgaaattttccaggttcagtggtccccccataatgaaacgatc
cttgcttcaagcggcaccgaccgccgcctccacgtgtgggatctgagcaaaatcggcgag
gaacaatctgctgaagacgcagaagacggaccgccagagttgctcttcatccacggagga
cacactgccaagatctctgacttctcgtggaatccaaatgaaccctgggtaatctgctcc
gtatcagaggacaacatcatgcaggtctggcagatggctgagaacatctataatgacgag
gaccctgacccaccagcatcagaacttgaaccttcatcaacatcgtaa
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integrated database retrieval system
