Lineus longissimus (bootlace worm): 135487567
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Entry
135487567 CDS
T09977
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03430
Mismatch repair
llon03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135487567
03460 Fanconi anemia pathway
135487567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llon03400
]
135487567
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
135487567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
135487567
NCBI-ProteinID:
XP_064627462
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All DBs
Position
1:7638867..7650535
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AA seq
972 aa
AA seq
DB search
MMMDVEGKSSGGVIKAIDGTSVHRICSGQVILNLATAVKELIENSIDAVATSVEVRLKEH
GSEVIEVVDNGCGVEECNFQGLTLKHHTSKLKDFSDLVSVDTFGFRGEALSSLCAVSDVA
VTTCHVKAKNATKLEFDHSGRITSQGPCARQQGTTVTVQNLFSTLPVRYKEFQRNLKKEF
TKMVQVLTAYCLISTGVRITCTNQVGKGKKTTIASVNGNKLVRENITNIFGPKQQSSIIE
FQQYKPTEDVCSDLGVKITSDQQLACPFQISGFVSSCQHGKGRSSTDRQFIYVNCRPCDL
LKVSRTINEVYHMYNRHQYPFAVLNICLSKESVDVNVTPDKRQIFVENEKLLLAIIKSSL
IRMFEPLSSTYEMAQGKGGLGLRHDVLSKFRRMSDSVIPSSSSGSSPSKLKSSVSSSLAT
LKRSFSSAFAREREELERGAEDIKSKQPKLDTFFATLPKTPTDFDPPDSAQSSQSNASDD
SGCVFIEHVTQGETSRSTKEGCDSESDIEQDSDSIRHTSLGLKIEYHRQCLEKDSMSPDI
DNSSGVSSCEHSGSFKLSDFSNVSGANTKELAQPEGEISEADKLSSLSQTSKIVENSCVS
STSKQNYLEIDNKEQLPVRGTKDLVEVRSAKVEDDEHIHEEHIFQAASLVTQSCKKDSLS
SESKSPSNVSPESVPSNSSCSTSATFRLDSRGHEGPRSTREGDDCRITFTEFDKQEKVTS
RKLVEVSFSMDALKRKMIMKKLSAAPERSALTYRHFRATIQPDSNSQAEEELQKEISKDM
FSKMEILGQFNLGFILARLDQDLFIIDQHATDEKFNFETLQRTTVLEGQKMIQPLKLELT
AVGESVIMENLAIFKKNGFDFIIDEDAPPTEKISLVATPVSKNWLFGKSDIEEMVFMLGD
SPGVMCRPSRVRQMFASRACRKSIMIGTALNKTEMKKLVCHMGEIEQPWNCPHGRPTMRH
LINLNMLPDQND
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatgttgagggtaaatcctcaggaggtgtgataaaagcaatagatgggacc
tctgtgcatcggatatgctcggggcaagtcatacttaacctagccaccgctgtcaaggaa
cttatagaaaacagcattgatgcagttgctacaagtgtcgaagtgagattgaaggagcat
ggcagtgaagtgattgaggttgtcgataacggttgtggggtggaggaatgcaactttcag
ggactaactctaaagcatcacacatctaagctgaaagatttctctgacctggtcagtgtt
gatacatttgggttcagaggggaggcactcagttcactctgtgctgtaagtgatgttgca
gtgacgacttgtcatgtcaaagctaagaatgctaccaagcttgagtttgaccacagtgga
aggataacatcacagggtccttgtgcaagacagcaagggacaacagtcactgtacagaac
ttgttcagtacactgccagtccgctacaaggaattccagaggaacttgaagaaagagttt
accaagatggtgcaggtgttgactgcctattgcctgatatcgactggtgtcagaatcacg
tgtacaaatcaagtgggcaaaggaaaaaagacgacgatagccagcgttaacgggaacaaa
ctcgtcagagaaaacataacaaacatctttgggccaaaacagcaatcttcaattatagaa
ttccagcagtacaagccaacagaagacgtctgctcagaccttggtgtgaaaataacgtct
gatcaacaactcgcttgtccattccaaataagtggttttgtgtccagctgtcagcacgga
aagggtagaagttcgaccgatcggcagtttatctatgtcaattgtcgaccttgcgatctg
ttgaaggtcagccgaactatcaatgaggtataccacatgtacaacagacatcagtaccca
tttgctgtgctcaacatctgtctttcaaaagaatccgttgatgtgaatgttacacctgat
aagagacagatattcgttgagaatgaaaaactgctcttggctattatcaagtcctccctt
attcgaatgtttgaaccactttcgtcaacctatgaaatggctcaaggcaaaggtggtcta
ggcctgcggcatgatgtgttgtcaaagtttcgacggatgagtgatagtgtaatcccttcc
tcatcgagcggatcatccccttccaaactgaagagttctgtgtcaagcagcctcgcgacc
ttgaagaggtcattctccagtgcgtttgcccgggaaagggaggagttggagaggggagca
gaagatataaagtcaaaacagccaaagttagacactttcttcgctactctccccaagacg
cctacagattttgacccacctgactctgcacaatcctcccagagcaatgcctctgatgat
tcgggatgtgtcttcattgaacatgttactcagggtgaaacgtcacgttctaccaaagaa
gggtgtgactctgaaagcgatattgaacaagattcagactcgataaggcacacttcttta
ggactcaaaatagagtaccacaggcaatgtttagagaaggattctatgagtcctgacata
gacaattcatctggtgtgtcatcatgtgaacattctggaagtttcaagttgagtgatttc
tcaaatgtcagtggtgctaatacgaaagaactggctcaacctgaaggtgaaatttcagag
gctgacaaattatcatcactatcccaaacatctaagattgttgaaaacagctgtgttagt
tctacttctaaacaaaactatttagagattgataacaaagaacaattgccagttagaggg
accaaggatttagttgaagtaaggagtgctaaagttgaagatgatgaacacattcacgaa
gaacacatatttcaagctgccagtttagtgactcaatcgtgtaagaaggattctttgtcc
tcagaatcgaagtctccatcaaatgtttctcctgaatctgttccctcaaactcatcctgt
tccacatccgcgaccttcaggctggattctagaggtcatgaaggtccaaggtcaacgagg
gaaggagacgactgtagaattactttcactgaattcgacaagcaagaaaaggtgacgagc
agaaaattggtggaggtgtcgttttctatggacgctttgaagaggaagatgatcatgaaa
aaactctcagctgctccagagagatctgccctgacgtatcggcacttccgcgcaacaatt
caaccggacagcaatagccaagcagaggaggagctccaaaaagaaattagcaaggacatg
ttctcaaaaatggaaatccttggacagttcaacctgggtttcatcttggcacgattggac
caggatctgttcatcatcgaccagcacgccacggatgagaagttcaactttgagactttg
cagcggacaacagtgttagagggccagaaaatgatacaacccctaaaactagaactgact
gccgtcggcgagtctgtcatcatggaaaacctcgccatcttcaagaaaaatggttttgac
ttcatcatcgacgaagacgcgccaccgacagagaagatcagtttggtggcgacacctgtc
agtaagaattggttgtttggaaaatcagatattgaggagatggtgttcatgctcggtgat
tcacctggtgttatgtgtcgaccctcacgcgttcgtcagatgtttgcctctcgagcgtgt
aggaaatcaattatgatcgggacagctttaaacaagaccgagatgaagaagcttgtttgc
catatgggagagatcgaacagccttggaattgtccgcacggacgccccacgatgaggcat
ctgatcaacttgaacatgttaccggaccagaacgactga
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