Lineus longissimus (bootlace worm): 135487827
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Entry
135487827 CDS
T09977
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llon03009
]
135487827
Enzymes [BR:
llon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135487827
Ribosome biogenesis [BR:
llon03009
]
Eukaryotic type
90S particles
Helicases
135487827
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
P2_N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135487827
NCBI-ProteinID:
XP_064627994
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All DBs
Position
5:complement(8394937..8401653)
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AA seq
942 aa
AA seq
DB search
MHGCKMNRSGHQITGFSRNSRGHRGGKQSFRKHEIYKKGKKKLEIIDEEIQALKSQYEEL
EVENIKLFTEIPLSKNTLAGLKDGGYTAPTEIQKQSIGLALQGHDILGAAKTGSGKTLAF
LIPVLECLWRQKWSAIDGLGALIISPTRELAYQTFDVLKKIGKHHDFSAGLVIGGKHVRE
EAERMNRTNIVICTPGRLLQHMDETVNFYATGLQVLVLDEADRILDLGFKDTMNAVIENL
PEERQTLLFSATQTKSVKDLARLSLKNPMFVSVHENSKHSTPAQLEQSYIVCDLHQKIHI
LWSFIKNHLKKKTLVFIASCKQVRFIYEVFKKLRPGVTVLGLHGAMNQLKRVAVYDQFCR
KQHAVLFATDIAARGLDFPAVHWVLQLDCPEDANTYIHRAGRTARYEKGGEALLMLLPSE
EPAMIEQLAAKKIPVNRIRINPNKEWSIQGKLEALLASDRMLKEAAQRAFVSYVRSVHFM
SNKAVFDVQKLDTDQFARSMGLAIPPRIRFLRKVEALARQETEKERKKAAKKGKKARTPE
EILNKAKQIKLNKIGAEEEEAEKNMDAGFESEEYDESGSAESDVDSDESDGDSDTGVVQT
DSLERRTKAVTKSVKKGVLDTLKELGPGVSDSDDSESGEESSESDSDDSSEGRTSRVEGK
SKDVPRSNLPRQEVYSFGIDDDDDELFTVKKGVAISSSDEDEATIAKILEESKRGKKAKP
LTKFALAKKLQKKEITVNTKVVFDEEGEALEDSNKKRKTDNGHDNDVGGLNIELARRKMQ
EEDKIDKEIFKEKVRQKHKEERRKKKEKARKKNKKQDEDEEDEFQVTLGAPADGNDSFDS
ELESGKEDSPVELEEYSAGSESESDDEIPSKRQKFSENVMEEEEDMDTGDEVESNDDGSD
DDGVQDDDDDNDDDQDNDNDNEAYGGDDLDVDEAFALKLLQH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcatggttgcaaaatgaatagaagtgggcatcaaataacaggtttttctcgtaattcg
cgaggtcatcgtggtggaaaacaatcctttcgcaaacatgagatatacaaaaaagggaaa
aagaagttagaaattatagatgaagaaatacaagcgttgaaatcccagtacgaagagctc
gaagttgaaaatatcaaactatttacagaaatacctttgtcaaaaaatactctagcaggt
ttgaaggatggaggttacactgcccctacagaaatacagaaacagtcaatcggtcttgct
ctgcaaggccatgatatccttggagctgctaagactggttctgggaaaactctggctttc
cttattcctgttttggagtgtctgtggcgacagaagtggtctgctattgatggtcttggt
gctttgatcatatctcccacaagagaattagcatatcagacttttgatgtgttgaagaag
attgggaagcatcatgatttctctgcaggacttgtaattggtggcaagcatgtgagagaa
gaagcagagagaatgaatcgcacaaacattgtgatctgcacacctggtcgactcctacaa
catatggatgagacagtcaacttctatgccactggtttgcaagtactagtcctggatgaa
gcagaccgtatcttggaccttggtttcaaggacaccatgaacgctgtgatagaaaatctt
cccgaggagaggcagacattgttattctctgccacccaaaccaaatccgtgaaagattta
gctaggctcagtcttaagaacccaatgtttgtatccgtccatgagaattctaaacacagt
actccagcccagttagagcagagctacattgtgtgtgacctccatcaaaagatccatatc
ttgtggtcattcataaagaatcacttgaagaagaagactttagtgttcattgcaagctgt
aaacaggtccgattcatctatgaagtgttcaagaagttacgtccgggtgtgacagtttta
ggactacacggtgcaatgaatcagctgaagagggtcgctgtttacgatcagttctgtcgc
aaacagcacgctgtgttgtttgccacggatattgcagctaggggattagatttccctgcg
gtacactgggtcttgcaacttgattgtcccgaagatgccaatacgtacatccaccgagca
gggcggactgccaggtatgagaagggtggtgaggctttattgatgttgctaccatctgag
gaaccagcgatgattgaacagctcgctgccaagaagattcctgtgaacaggatcagaatc
aacccgaataaagagtggagtatccagggcaagctagaggcgttgttggcatctgatagg
atgctcaaagaggcggcacaaagggcttttgtttcctatgtgcgctctgtgcatttcatg
agtaacaaggctgtctttgatgttcaaaagttagatacagatcagtttgctcggtcgatg
ggtctagctattcctcctcggatacgattcttacgcaaagttgaggcattggcacggcaa
gaaactgaaaaagaaaggaagaaggcggcaaagaaagggaagaaagcacgtacgccagaa
gagattctgaataaggccaagcaaataaaactgaataaaattggtgctgaggaggaggag
gctgagaaaaatatggatgcaggttttgagtctgaggagtacgatgaatctggttctgct
gaatcagatgtagattctgacgaatctgatggcgattcggacactggagttgtacaaaca
gactccctggagagacggactaaggctgttactaagtcagttaaaaagggtgtgctggat
actttgaaagaacttggccctggtgtgtcggactctgatgattctgagtcaggtgaggag
tcaagtgaaagtgactcggacgattcttcagagggaaggacaagtagggttgaggggaag
tcaaaagatgttccaaggagtaatttgccaaggcaagaggtttacagttttggcattgac
gatgatgatgatgagctttttactgtgaagaagggtgttgctatttcatcatcggatgaa
gatgaggctacaattgcgaagatactggaggaaagtaagagaggcaaaaaggcaaaacct
ttgaccaagtttgcactcgctaagaaattgcagaagaaggagattacagtgaacactaaa
gtagtgtttgatgaggagggtgaggcacttgaagattccaacaaaaagcgcaagacggac
aatggtcatgacaatgatgttggtggactaaatatagaattggcacgccgcaagatgcag
gaggaggataaaattgacaaggaaatcttcaaggagaaggtccggcagaaacacaaggag
gagagacggaagaagaaggagaaggccaggaagaagaataagaaacaagatgaagatgag
gaagacgagttccaggtcaccttgggggctcccgctgatggcaatgattcgtttgactct
gaacttgagagtgggaaagaagactctcccgttgaactggaggaatatagtgctggttcg
gagtctgaatcagatgatgaaataccaagtaaaaggcagaagttcagtgaaaatgtcatg
gaggaggaagaagatatggatactggtgatgaggttgaaagcaacgacgatggaagcgat
gatgatggtgttcaggacgacgatgatgataatgatgatgatcaggataacgataatgat
aatgaggcatatggtggagatgatctggacgttgatgaggcatttgctctgaagctcctt
cagcattga
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