Lineus longissimus (bootlace worm): 135488135
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Entry
135488135 CDS
T09977
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135488135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llon03400
]
135488135
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135488135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
T3SS_needle_reg
DUF4795
Motif
Other DBs
NCBI-GeneID:
135488135
NCBI-ProteinID:
XP_064628672
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Position
5:9164181..9173839
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AA seq
936 aa
AA seq
DB search
MTSFSRDFSNMAVPSKENEIDLDNLQESGFDLFYKSLPEKPATSIRFFDRDAYYTVHGQD
AVFAGKEIFKSMGVVKYFGKKKREYVCVNKTNFELMLRELLLVKQYRAEVYKCSRNTSKW
ELVYKGSPGNLTQFEDVLFSNSELSVSVGVLAVKLGTENGQRLVGAGYVDATLRKFSVCE
FVDNDQFSNLEALIVQMGPKECLIPAGDTGPEYAKLKEILGRSGMLLSERKKSEFSTKDN
VQDLDRLLKFKNPEQASSAALPEMDKVHALAAVAALIKFLELLSDEDNFGQFSLSTFDLS
LYVKLDAAAVSALNLLPAPNEGPNKNQSVLGLMNKCRTAQGQRLIEQWVKQPLLDKNQIE
ERLDIVEAFIEDGELRQTLQEDLLRRIPDFQRLSKKFQRKRANLQDCYRIYQAVEKMPQL
LEALERNGGTHQALLMSVFTNPLKELLMDFSKFQEMIEATLDMAQVENHEFMIKSDFDEV
LQELRGKLDRIENDMQKQLNRAAKDLGVEAGKVLKLESNSQMGYFFRVTRKDEKALRNNK
SYMIIDTRNNGVRFRSNGLRDLNEEYIDIKEQYTEQQKSVVDEIVNIAAGYIDPMAVIND
IIAKLDVLVSFAHVATSAPIPYVRPKLYPKGTGKMNLKEARHPCLEMQDDVAFIANGIRF
EKDKAMFHIITGPNMGGKSTYIRSAGVIILMAQLGSFVPCSEAEVSLVDSILARVGAGDS
QMKGVSTFMAEMLETNAILRGASQDSLILIDELGRGTSTYDGFGLAWAISEYIATKIKAF
CMFATHFHELTALADVVPEVTNLHVTALTTSDTLTLLYRVKEGVCDQSFGIHVAELAHFP
KPVIEFAKEKANDLEDYQMIVHTIEDTDEDGASSAKKRRLTKQDGEKVINDFLKKIKALP
VDELSPDQIMTEITKLRAEVAASDNPYIQDILTRMA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcattttcccgcgatttcagcaacatggcagtcccatcaaaagaaaatgagatt
gatctcgataacttgcaagagtctggttttgacctattctacaagtctttacccgagaaa
cctgcgacatctatacgattctttgacagagatgcctattacacggtgcatggccaagat
gctgtgtttgcagggaaagagatcttcaaaagcatgggcgttgtcaaatattttgggaag
aaaaagcgtgaatatgtttgtgtgaacaagacaaactttgagttgatgcttcgagagctt
ctcctggtgaagcagtacagagctgaagtctataaatgcagcagaaacacaagtaaatgg
gagttagtatacaagggatctcctggcaatctgacccagtttgaagatgtcctcttcagc
aactctgagttgtctgtgtctgttggtgtgttagctgtcaagttgggaacagaaaatgga
caacggctggttggtgctggttatgtggatgccacactgaggaaattttctgtttgtgaa
tttgttgacaatgaccaattctctaatcttgaggctctgatagttcagatgggtccaaag
gaatgcctgatccctgctggcgacactggtcccgagtatgccaaactaaaagagattttg
gggaggagcggaatgctgctctcagagaggaaaaaatctgaattctccacaaaggacaac
gtgcaggatttggatcgtttgctaaagttcaagaatccggagcaagctagcagtgcagca
cttcctgaaatggacaaggttcatgctttggcagcagttgctgcgctcatcaagtttctt
gagctcctcagtgatgaagataattttggccagttctccttgagcacatttgatctgagc
ctgtacgtgaagctggatgctgctgcagtcagtgccctgaatcttctgcccgccccgaat
gagggccccaacaagaaccagagtgttcttggattgatgaacaagtgtcggacagcccag
ggtcaaaggttgatcgaacagtgggtaaagcaacctctcctcgataaaaatcagattgag
gaaagattggacattgttgaagcatttatagaagatggtgaactcaggcagacattgcaa
gaggacctattgagaagaataccagacttccaacgccttagcaagaaattccaaaggaaa
agggctaatctgcaggattgttatcggatttaccaggccgtagagaagatgccacagctc
ctagaagccctggagagaaatggtggaacccatcaagcgttgctcatgtccgtcttcacc
aaccccttgaaggaacttctcatggattttagtaaatttcaagaaatgattgaggccacc
ttggacatggcacaggttgaaaaccatgaatttatgataaagtccgactttgatgaggtt
cttcaagagttgaggggaaaattagaccggatagaaaacgatatgcaaaaacaactgaac
cgggctgctaaggatcttggagtagaagctggaaaggtgttaaaactcgagtccaacagt
cagatgggctatttcttccgagtgacacgaaaggacgaaaaggccttacggaacaacaaa
tcgtacatgattattgacacgaggaataatggtgttcgtttccgtagtaatggcctacgt
gatcttaatgaggaatatatagatatcaaggaacaatacacggaacagcagaagtctgtg
gttgatgaaattgtcaacattgcagctggatatattgatcccatggccgtgatcaatgac
atcattgccaagcttgatgtcctggtcagttttgctcacgttgctacctcagcgcctatt
ccatacgtcaggccaaagttatacccaaaaggcactggtaagatgaatctgaaggaagcg
aggcacccatgcttagaaatgcaggatgacgtggcgttcattgctaatggcatccgtttt
gaaaaagataaagccatgtttcatataatcactggaccaaatatgggaggaaagtccact
tatataagatctgcaggtgtcatcatcctgatggcacagctgggtagttttgtgccatgc
tctgaggctgaggtgtcactcgtcgatagcatcctggcccgtgttggtgccggagacagt
cagatgaagggcgtctccacgtttatggcagagatgttggagactaatgctattcttagg
ggtgcttctcaagactcattgattcttattgacgaactgggacgtggcacgtcaacatat
gatggctttggattagcttgggcaatatctgagtatatcgctacaaagatcaaagcattc
tgcatgtttgccacccactttcacgagttgacggccttggctgatgtggtccccgaggtc
accaaccttcacgtgaccgccctcaccaccagtgacacactgacgctactctaccgggtg
aaggagggcgtgtgtgatcagagttttggaatccacgtagcggaactggcacattttcct
aaacctgtaattgagtttgccaaagagaaagctaatgaccttgaagactaccaaatgatt
gtgcacacgattgaagacactgatgaagatggtgcatcatctgccaaaaagcgacgtctg
acgaagcaagatggtgaaaaggtcattaacgactttctaaagaaaatcaaggcattgcct
gtggatgaattatcaccggatcagataatgactgagataacaaaattacgtgcagaagtt
gctgcaagtgacaatccatatattcaggacattttgacaaggatggcgtag
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