Lineus longissimus (bootlace worm): 135488338
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Entry
135488338 CDS
T09977
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH-like
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llon04121
]
135488338
Enzymes [BR:
llon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135488338
Ubiquitin system [BR:
llon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135488338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
PHD
zf-RING_5
PHD_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
135488338
NCBI-ProteinID:
XP_064628981
LinkDB
All DBs
Position
5:2839363..2851385
Genome browser
AA seq
2080 aa
AA seq
DB search
MSKRKKAPPKKVDEEKRNRLTWNMGDGDRSLQIIEDEDPSLIFELQNDRTVRGWDSLLVP
NSSNGYSSVAPSATSINAAAVPVRSKQVTEKTPLAHVEDTKTTTNMDEDSQDPVSLTLVL
EPKKVYENYLVYEDDEHLKQALKSCHAMLEVHSSNSSNWQCKVGSFKISLLQPNGVESRI
GQCISVPDVEKFWMYGSEIPGCNILYYELSAQQDQENTGFVWKKKNPFLNRVPPKCQRKV
LYYLADTQLPYEILEIVHSTPNQKHFRFVCDGNLDKSGEVEVTIYLQEAGVSSVQHPSEP
PSRSRAVQDTYKLVQALMSYFHGLEPPVTDFTGKRFSRKHDIKDFFRNIKEIHEKTPPEL
RLDVQHPTLKPVLRPYQKQGVLWMLQNERYNDEEKVEDEKKEAVVHQLYEEVTMRDGQHL
YYNKSGGIFLKEKPKSIMNPPGGLLADEMGLGKTVEVLACMLLNPRKDLNEPGSPCAVKT
WVKDRVILPKKEVAPKAEDAKARDPLDVDTCDVPQTTRPEMTPIPVPLMNNDVTPTSSLL
PGDGSFLTKEVKEKNLPASGYDVGLFKDSSLVSGDVEVTTKQTTVNRKLSEDIVQVDIDA
IDDGNKSTSVPSPLVIQLGPTTDFGSIGGTSILKQSASVMKSHDGVSASSSAQDPKDNFS
TSGECSSCGIVSSDKGMKTQSPQIEKPIKDDLGDGSDKPKGKSGDDDTIPLGDSMTEYNL
GVFEDGMNESSRWDFWLKRKQVVLERPKKLGVCEKVDIAFDNTLNDAQSLDSSNGFVSSV
YDIPSNSVAMDSSGSSCVHGMGSSAIKQNASKLTVLESGAPDQKQGSNMSSESSGQTIPS
QSEKCESAQAESVQGVQGLNSSLCAGEMCVGNNQGGRKRRKKKVRSKSMPHVLVATTGNN
DESITEGLDKDCDGLKTESHKSVISSELQKGVSTGLVADVVNGRKGKRKLPGGTKKGVLK
ATRFEYFAPVDELPSPKKGFSQKAEQKEFFECVCGQKATDFDTKLRVQCNRCGLWQHAVC
VGYDVEDPTRGDYKCPHCHVISPPVPSGATLIISPNAICHQWVEEIHKHINEEKLKVFVY
GGVYKHRFIQPQTLANHDIVITTYETLSKEINYVDLPHSNSEKGRRLRHPKRFMAIPSPI
VAVKWWRICLDEAQMVESTTTRTAEMALRLSAVNKWCVTGTPIHHDLADLYGLLLFLGVD
PYWVKHWWDTLLYNPYCYGQKEPMHQAIAKVLWRTSKVDVIEQLGLPTQSEKIHWLKFSP
IEEHFYRQQYEHHYKQATNMLMKWSDNRKKLSSLDRHTLHWLLHPLVSLRQACCHPQAVR
GAFLNVNKTTMTMEEILTQLTKKSKTECEESHRQMVAAMNGMAAIHIIEEEYVEAVEVYR
DVLRAVVEDENKIRTDKIQQLHTLHNLDEILSLGVADVGRTLRDDHLKQQCKEIKEEYLA
KAVASVVVAHEALESVQKDIREVSAELEGGVNWWADVIQYALAADLDDVLVDRVRSELQN
TSSLGRGSLAYKFRNVNGMEYVLNILLEQLEEAHDNLTVSLTDLDEEPTPNNVEEAVICC
LRPAREVRKTCCFCKADELFSVYESKLFLFKEQQVCANVQEDGKYSVTTKRQGTWADSEL
EKAIKILASFSRHIAADASLSEYGSIHIKVFDALKKEFKCLRNKWLYLRERISAIDELNM
ATTRYRLRLPGEERSNPPQPNVLHPVEVDLTKSKLSADKAIAESELRKKLGQLIYLRNLE
KAHDHLEGGSNPEACPICQKELGDEWSVMRCGHFFCMDCIHIMLNDYSSGLRRKSLKCAI
CRNISLHSEISYVSLKKTSNTEEGEECFQVKGDHSTKVTAVVRCLKQIQLNDPGAKALVF
STWQEVLNVIAEGLRQNNIGFKSLHAQNKFQANLHSFRSDDDVSVLLLPVHSGANGLNLI
EATHILLVEPVLNQAQELQAIGRIHRIGQTKPTFVHRFIVKATIEEKMHSMLKSIQLPID
SNNDEESNLTIGDLWSLFSRRGIERDEEREGSDGAARISRPEPSGESSNHSLPDDEEQSP
GPAEEIQANLVFEREQPTELDRIDEQAIDTIPWVGEHVTI
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagaaagaaggccccacctaaaaaggtggatgaagagaaacggaatcgcctg
acatggaacatgggagatggtgacagaagtcttcagatcattgaagatgaggacccatca
ttgatatttgagctacaaaatgacagaactgtccgcggatgggatagtctgcttgtacca
aacagcagtaatggttatagctctgtggctccttcagctaccagtataaatgcagcagct
gttcctgttcgttcaaagcaagttacagaaaaaacacctttggcacatgtggaagacacc
aaaactacgaccaacatggatgaagacagtcaagacccagtgtcattgacactagtactg
gaaccaaagaaagtttatgaaaactacttggtgtatgaggatgatgaacatttgaagcag
gccttaaagagttgccatgccatgctggaggttcattcatcaaatagtagtaattggcag
tgcaaagttggtagcttcaagatttctctgttgcagccaaatggtgtggagtcgagaatt
ggtcagtgcattagtgtccccgatgttgagaagttctggatgtatggaagtgagatccct
ggctgtaacattctttattatgaattaagcgctcaacaggatcaggagaacactgggttt
gtttggaaaaagaaaaatccttttctgaacagagtgccaccgaagtgccagaggaaagtc
ctatattaccttgctgacacacaactgccatacgaaatcctagagattgtacacagtacc
ccaaatcagaaacattttcgatttgtttgcgatggtaatttggacaagtctggtgaggtc
gaggttaccatctacttgcaagaggctggtgtgtcttcagtgcagcatccaagtgaacca
cctagcaggagccgagctgtacaggacacttacaagcttgtgcaagccctcatgtcctac
ttccatggtcttgaaccaccagttactgacttcacgggcaaacgattcagtcgaaagcac
gacatcaaagacttcttcagaaacatcaaagagatccatgagaagacccctcctgaactc
cgccttgatgttcagcatcctactttaaaaccagtgcttcgtccttatcagaaacaaggt
gtcctgtggatgctgcagaatgagaggtataatgatgaggaaaaggttgaggatgagaag
aaggaagctgtggttcaccagctgtatgaagaggtgaccatgagggatggacagcatctt
tattacaacaagagtggtggaatctttcttaaggaaaagccaaagtctattatgaatccc
cctggtggtctccttgctgatgagatgggcctcggaaagaccgtggaggtgttagcctgt
atgttacttaatccaagaaaagacctcaacgaacctgggtcaccttgtgctgtcaaaacg
tgggtcaaggatcgagtgatattgccgaaaaaagaggtcgcaccaaaggctgaagatgcc
aaggccagagatcctttggatgtcgatacttgcgatgtgccacaaacgacgcgtccggag
atgacaccaataccagtcccattgatgaataatgatgtcacccctacgagttctcttcta
ccaggggatggatcctttttgacaaaagaggtgaaggagaaaaacctgcctgcttctggc
tatgatgtaggcttgttcaaggattctagtcttgtaagtggcgatgttgaagttacaaca
aaacagacaacggtcaacagaaagctgagtgaagatattgtgcaggttgatatagatgca
atagacgacggcaataaaagtactagtgttccttcacccttagttatacagttgggacca
actacagactttggaagtatcggtggaacgagtattctgaaacaaagtgctagtgtgatg
aagagtcacgatggagtttctgctagctcctctgcccaggatcccaaagataacttttct
acctcaggtgaatgctctagttgtggtattgtgtcatcagataaaggaatgaagacacaa
tctccacaaatagaaaaaccgataaaagatgatttgggagacggatcagacaaaccaaaa
ggtaaatctggcgatgatgacacgatacctttgggtgactcaatgaccgagtacaatctt
ggcgtctttgaagatggaatgaatgaatctagtcgttgggacttttggctcaaaaggaag
caggttgtacttgaaagacctaaaaagttaggagtgtgtgaaaaggtggacatcgctttt
gataataccttgaatgatgctcaatctctagactctagcaatggatttgtcagtagcgtt
tatgatattccatctaattctgttgctatggattcatctggatcatcatgtgttcatggt
atgggctcgtcagcgatcaaacagaatgcatccaaattgacagtgctggaatcaggtgct
ccggatcagaaacagggtagtaatatgtcttcagagtcgagtggtcagactattccaagt
cagagtgagaagtgtgagagtgctcaagcagaatcagttcagggtgtacagggtttaaat
tctagtctttgtgctggggaaatgtgtgtgggaaataatcagggtggtcggaaacggaga
aagaagaaagttagatcaaagtcaatgccgcatgttcttgtggctaccacaggtaacaat
gacgaatctatcactgagggattggacaaagactgtgatggtttgaagactgaatctcat
aaatctgtgataagttcagaattgcaaaaaggtgtctctactggtttggtggcagacgtt
gtgaatggtaggaagggtaaaaggaaactacctggcgggaccaaaaaaggagtgctcaag
gcaacaaggtttgaatactttgctccagtcgacgagttaccatctccgaagaaaggcttc
tctcaaaaggcagaacagaaggaattctttgagtgtgtgtgtggtcaaaaggcaacagac
tttgatacaaaattacgggtacagtgcaacaggtgtggactctggcaacatgcagtatgt
gtgggatatgatgtggaggatcctactcgtggagattacaagtgcccacattgccatgtg
atatctccacctgtcccatcaggagcaaccctcatcatttccccgaatgccatctgccac
cagtgggtcgaagaaatccacaaacacataaatgaggagaagttaaaagtctttgtctat
ggcggtgtctacaagcaccgatttattcagccgcagaccctggccaatcatgatattgtt
atcacaacatacgagacacttagcaaggagatcaattatgttgacttgcctcacagcaat
agtgagaaagggaggcggttacgccatccgaagagattcatggcaatcccgagcccgatc
gttgctgtcaaatggtggcgcatctgtttagacgaggctcagatggtcgagagtactaca
accagaacagcagagatggcattgcggctaagtgctgttaataagtggtgtgttactggg
acacctatacatcatgatttggctgacttgtatggcctgctacttttccttggtgttgac
ccatactgggtgaaacactggtgggatacactactctacaacccctactgctatggtcag
aaggagcccatgcatcaagcaatcgctaaagtcttgtggaggacgtccaaggtcgatgtt
atcgaacagcttggcctccctacccaatcggagaagatacactggctgaagttctcgcct
atcgaagaacatttctatcgtcaacagtacgaacaccattacaagcaagcaacgaatatg
ctgatgaaatggagtgataatcgtaaaaagttgagttctctggacaggcacactctgcat
tggcttcttcacccccttgtcagtctacgccaagcctgctgccatccacaagctgttagg
ggagctttcctcaatgtcaacaaaaccacgatgacaatggaggagatcctcactcagctc
accaagaaatccaagactgaatgtgaagagagccacaggcagatggtagctgccatgaat
gggatggctgctattcacataatcgaggaggagtatgtagaggccgtagaagtctaccgt
gatgtccttagagccgtcgttgaagatgaaaacaaaatcagaacagataagatccaacaa
ctccataccttacacaacttggatgaaatcctttcactcggagtcgcggacgttggaagg
acgctgagagatgaccacctcaagcaacagtgtaaagagatcaaggaagaatatcttgcg
aaggctgtggctagtgttgtggtggctcatgaagccctggagtcagtccaaaaggacata
cgggaagtgtcggccgagcttgaaggtggtgtgaactggtgggctgatgtcatccagtat
gcccttgctgccgaccttgatgacgttcttgtggacagagtccgatcagagctccagaac
accagcagccttggcaggggcagcctagcatataaatttcgcaatgttaatggaatggaa
tatgtgttgaacatcctgttggagcaactggaggaagcccatgacaacctgactgtttct
ctgacagatttggatgaggagccgacccctaacaatgtcgaggaagctgtcatctgctgc
ctcaggcctgcaagggaagtcaggaagacgtgctgtttctgcaaggcagatgaactattc
tcagtctacgagtcaaagttgttcttgttcaaggaacagcaagtatgtgccaatgttcag
gaagatggcaagtacagcgtgaccaccaagcgccaggggacctgggctgacagcgagttg
gagaaggccatcaagattctggcgtcgttctcaagacatattgctgctgatgccagcctt
tcagaatatggtagcatccacataaaagtcttcgatgcgttgaagaaggaattcaaatgt
cttagaaacaagtggttataccttcgtgagcggatctctgctattgacgagcttaatatg
gccacgactcgataccgcttgagactgccgggagaggaacgatctaatcctccgcagcca
aatgtgctgcacccagttgaggttgacctaaccaagagcaagctcagtgctgacaaggcg
attgcagagagtgaactgaggaagaagcttggccagctgatctacttgaggaacttggag
aaggcccatgatcatttggagggtggctccaatcctgaagcatgtccaatctgtcagaaa
gagctgggagatgagtggagtgtgatgcgctgtgggcacttcttctgcatggactgcatc
cacatcatgctcaacgactacagctctggcttgcgacgaaagtccctgaaatgtgctata
tgtcgtaacatttccctccacagtgagatatcctatgtgagtttgaagaagacttctaat
acagaggagggagaggagtgctttcaagtcaagggagaccattccacaaaagtgaccgct
gtagttcgatgtctcaaacagattcaactcaatgaccctggagcaaaggcccttgtgttc
tctacatggcaagaggttctgaacgtcatcgccgaaggcctacgccagaacaacattggt
ttcaagtcccttcatgctcagaacaaattccaggcaaacctgcacagttttcgtagtgac
gacgatgtgtctgttctcttgctgcccgtccactctggggcgaatggtctcaacttgatc
gaggccactcatatactccttgtagaacctgtcctaaatcaagctcaggaactccaagct
attggcaggattcacaggattggacaaacaaaaccaacgttcgtccaccgcttcattgta
aaggctacgattgaagagaaaatgcatagtatgttgaaatccatccagttgccgatcgat
agtaacaacgatgaggaaagtaatctgaccattggggacttgtggtccctgttctcaagg
aggggcatcgagcgagacgaggaaagagagggtagtgacggtgctgctaggattagcaga
cctgagcctagtggcgaatctagcaatcattctttgcctgatgatgaggaacaatcacca
ggccctgcagaagaaattcaagcaaatttggtttttgaaagggaacaaccaacagaattg
gatcgcattgacgaacaggccattgacacaattccgtgggttggtgagcacgtgactatt
tga
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integrated database retrieval system
