Lineus longissimus (bootlace worm): 135488446
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Entry
135488446 CDS
T09977
Name
(RefSeq) cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135488446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llon02000
]
135488446
Transporters [BR:
llon02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
135488446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_29
DUF4162
SbcC_Walker_B
MukB
RsgA_GTPase
AAA_23
AAA_16
AAA_30
Motif
Other DBs
NCBI-GeneID:
135488446
NCBI-ProteinID:
XP_064629126
LinkDB
All DBs
Position
5:3757807..3775295
Genome browser
AA seq
1722 aa
AA seq
DB search
MGGSFGQQFKAFLRRNLLLKRRRIPSTCVEFIGPMVIAAFVAVASSAISRISYPAVPEYS
ANTLFQSRFYPSPTKTLMVAPNNAAVKSIMDYVVSELPVTAAKKYEMFANDTAMDDALRA
SPSSYSIGVMFADDPMVNGTYQIRVPFDQQADVKTTLDYAGRANCRSSDGLGGTCPPNKG
YLYSGFATLQVAVDNAMIKVKTSNTGFQLPSILVQLMPKEAYSVPPHSVQFAVCAVGAVL
FVSFYGPLVNLLVTEKEKNIRDSLNMTGMNRTAFWLAWTMIYWLMGIVVAAGVTGIFRAG
SVFITSNFGLVFFINLLYLYAGFMFALMMSTFFQTTKVSSIAFFIIFLLLGGLYFVCKIP
ALGGVSEEMNPAVFWLLSLFPQVAYSLALDQLIYVEWAHPTEGATFSNAGFTAFKQNFSI
QAAMVMLFVDIILYALLLGYFDNVVPGVMGKRKSLIFCFKKSYWEPPESEHKDFSHLLEG
SRKIEDIESVPNDLVGKESIRLFNVRKIYDTGKRKKNEEKSKGRCIPLYEMETINAVDSV
SLDIYEGMITALLGHNGAGKSTLFGIMSGLINPSFGTATIYGKDVCSDGDLYQIQHMLGV
CPQHDILYDDLSVEEHLELFAHIRGVQNVDAEVERVVSLVDLSSQLHTHSSELSGGQKRK
LSVGLAMIGDPKVIFLDEPTAGMDPYSRRKMWTLLKTIKRDKTILLTTHFMDEADILADR
KAIVNKGKLQCYGSSMFLKNRFGIGYRLNMVTEENFNAEEMTSFVTHHIPDASMIRQHAM
ELSYTLPMKDTDKFASLFQALEQEQANDNGLGINNYGVSMPTLEEVFLRLAETNEFRELN
KELPANDIQIDKILSTDDMRAATAETSADRHPLNIEEEDTRIGQVKVRMREPPQNIVKSG
DFKKNQFQAIIWMRAQMLKRAWFALVFRWIIPIAVGLIGVMILGFQPNEQKYEIPVANDF
VKSWIAYFSSETPLLYLNSAATSLTKLVSNFNSSGYVWSSAMTSSQTLTAIRPHHGAFNI
TGIDLTTFGTSPAFTLYYNDTALHSLPLQLNIWANAWYRAYSGDTSWKIGVTSRSLPKIN
PTIEFSGRVFNGIRLIGLAFCMLSGQFGFEVAEDRASKCRSQLKVAGVTVRMYWATTLFF
HGIQCVVGLLICIVLLFAVNIAEFQGASPVVLIIILVILYVPVNLLFCYVQTFAFKSPET
VGSVQGWGVSLYGILPYLVVSFIDAQSYVAMVALHYLFCLLIPPYLIIGGLHFIVRVYTS
ALIKDEVDQIQQLDYWRFENHVIGTVIISIFHLVFLSLLLVILDVRSTGGNVKDVFVLKK
RKRSVLVSPHEFNQAFDSSPELILAEEVEDSDVTDERSLVASMCSGKVSQENTAILVNGL
RKEFRKRSGDLCNCCQPSVDKIKVAVDNLTFHVQTGEVFGLLGHNGAGKTTALNAIIAEV
VPDKGQVIVGGYDVSSNLSEVFHELGCCPQHDQLWHYLSLEEHLKGYALINGVPKSDIDQ
VIDFYLENLQIEEHRKKTTKGLSGGTKRKLSYAISMIGMPKAVLLDEPSTGMDPASKRFL
WDTVIKGFSGTNRGAILTTHSMEEADALCTRVGIMVAGTLKCLGPTQHLKTKFGGGYTLE
VKLRQTKEDDADDLLEALNDYIKEIFPQVTILEQFGDRVQYKVPSEDVKALSVVFSAVES
AKDRLNIEEYSFSQSTLEQVFIQFAKQEYEAVESVRKGSINV
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgggaggttcctttggccagcaattcaaggccttcctcaggcgaaacctgctgttgaag
aggcggaggattccttcaacatgcgtggaattcataggaccaatggtcattgctgccttc
gtcgccgtagcaagctcggcgatctccagaatttcgtaccccgccgtcccggagtacagc
gccaacaccctgttccaatcccgcttctatcctagccctacaaagaccctgatggtggcg
cctaacaacgccgcggtgaaatcaatcatggattacgtagtttcggaattgcctgtcacc
gcagcgaaaaagtatgaaatgtttgcgaatgacaccgctatggacgatgcgcttcgtgcg
tccccttcctcttactcgatcggggtgatgtttgctgatgacccaatggtaaacggtaca
taccagatacgagttcctttcgaccagcaggctgatgtcaagaccacattagattacgca
ggtcgggcaaactgtcgaagtagcgatggattaggagggacctgtccgcctaataaagga
tatctttacagtggcttcgctacattacaagttgctgttgataatgctatgataaaggtg
aaaacctccaacactggtttccagctgccatccattttggtacagctcatgccgaaggaa
gcttattctgtgccaccgcattcagttcagttcgccgtttgcgctgtgggtgctgtcctg
tttgtgtccttctacggacccctcgttaatctactggtcactgaaaaagagaagaacatc
agagactctctcaatatgactggaatgaaccgcaccgctttctggctcgcctggacaatg
atctactggcttatgggtatcgtggtcgccgcaggagtgacgggcattttccgggcagga
tctgtcttcatcacatccaacttcgggctggtatttttcataaatttgctgtacctttat
gctggatttatgttcgcattgatgatgtcgacgtttttccaaacgacgaaggtgtcgagt
atagcattcttcataatcttcctcttgctaggggggctgtatttcgtctgtaagatccca
gcgctgggaggagtgagtgaggagatgaaccctgccgtgttttggttgttgtctctcttc
cctcaggtggcctattctttggcacttgatcagctgatatacgtggaatgggcgcaccca
acggaaggtgccacgttttcaaacgctggcttcactgcgtttaagcagaacttctccatt
caggctgcaatggtcatgctcttcgtcgacatcatcctgtacgctcttcttctgggctat
tttgacaatgtcgtgccaggtgttatggggaagagaaagtcactcatattctgctttaag
aagtcgtattgggagccaccagaaagtgagcataaggacttcagccatcttctggaaggc
tcaagaaaaattgaagatattgagagcgtcccgaatgatctcgttggcaaggaaagcata
agactcttcaacgtccggaaaatatacgatactggaaaaaggaagaagaatgaggaaaag
agcaaagggaggtgcattcctttgtatgagatggaaacgatcaatgctgtagattccgtt
tccttggatatatatgaaggcatgattacagccctcttaggacacaacggggcggggaag
agcactttgtttggcatcatgtccgggctcattaacccctcgtttggtacggcgacaatc
tatggaaaggatgtctgttccgatggtgacctttaccagatccaacacatgttgggggtt
tgtcctcaacacgatatcctctatgatgacctctcggtcgaggagcacctagaattattt
gcccatatccgtggggtacagaacgtagatgctgaggttgaacgagtcgtcagccttgtt
gacctttcaagtcaacttcacactcactcatcggagctcagtggtggccaaaagagaaag
ttgtcagttggcctcgcaatgattggtgatccaaaggtgatattcctagatgaacccaca
gctggcatggatccttattcaaggcgcaaaatgtggaccttattgaagacgatcaaacgt
gacaagacgattctgctgacgacccacttcatggatgaggcagatattttagctgatagg
aaagcaattgttaacaaaggaaaattgcagtgctatgggtcgtccatgttcctgaagaac
agattcgggattggctatagattaaatatggtaacggaggaaaatttcaacgcagaggag
atgacttcatttgtcacgcatcacatccccgacgcgagcatgattaggcagcatgccatg
gaactctcctacacactccccatgaaagacacagacaaattcgcctctcttttccaagca
ctggagcaagagcaggcaaatgacaatggcctgggtataaacaattatggtgtgtctatg
ccgactctcgaggaggtctttttaagattagcggaaacgaatgagtttcgggaactaaac
aaagaattgccagcaaatgacatccaaattgacaaaattctcagcacagatgacatgagg
gcagctactgctgagaccagtgcggacaggcatccactgaacattgaagaggaggacacg
agaattggccaagtgaaagtcagaatgagggaaccgccacagaacattgtgaaatctggc
gatttcaagaagaatcagttccaggcgattatctggatgcgtgctcagatgttgaagagg
gcatggttcgcgttggtgtttcgctggatcattcctatagccgtgggccttatcggagtc
atgatactcggatttcaaccaaatgaacaaaagtatgagatccctgttgcaaatgatttt
gtgaagtcgtggattgcttacttctcgtcggagacgccgttgttgtacttaaactctgct
gctacctcgctcactaaactggtgagcaacttcaattcatcaggatacgtatggtcgagt
gcgatgacgtccagccaaacattgactgccattagacctcaccatggagcattcaacatt
accggtattgatctcacaacatttggtacaagtccagctttcaccctttattacaatgac
acggctcttcacagcctgcctctacagttgaatatctgggcaaacgcctggtatcgagca
tactcaggcgatacatcttggaagataggtgtgacttcacgatctttgcctaaaatcaac
cctaccatcgaattttcgggccgagtttttaatggcattcgcttgattggtttggcattc
tgtatgcttagtggacaatttggttttgaagttgctgaagacagagcatcaaagtgtcgg
tcacagcttaaggtagcaggagtgacagttcgcatgtactgggccaccacgctcttcttt
cacggcatccagtgcgtagtaggactcctcatctgtatcgtcctgctctttgccgtcaac
atagcggagtttcagggcgccagcccagtagttttgatcataatcctggtcatcctgtac
gtgccggtcaacttgctattctgttatgtccagacctttgcctttaaaagcccagagaca
gtgggaagcgtccaggggtggggtgtatcattgtacggaatcttgccttatttggttgtc
tcgttcattgatgctcaaagttatgtggcgatggtagcactgcattacctcttctgcctc
ttgattccaccatatctgataataggaggactacatttcattgtccgggtctacacctca
gcccttatcaaggatgaagtggaccagatccaacagctcgattactggcgtttcgagaac
catgtgattggaacggttataatctccattttccatctggtatttttaagtttgctcctg
gtcattcttgatgttagaagtactggcggtaatgtgaaagatgtcttcgttctcaaaaaa
agaaaaaggagtgttttggtgtctccacatgaattcaaccaagcattcgattcgtcaccc
gaattaatcctggcagaagaagttgaagacagtgatgtgactgatgagcgcagcctggtg
gcgagtatgtgcagtggaaaggtgtcacaagagaacacagccattcttgtcaacgggctc
aggaaggaatttagaaagcggtctggtgatctgtgcaactgctgccaaccatctgtggac
aagatcaaggtagcggtggataacttgaccttccacgtgcagacgggtgaggtgtttgga
ctccttggccacaacggcgctggcaagaccactgcgctcaatgccataatagcggaggtt
gttcccgacaagggacaggtcattgtgggtggatacgatgtgagttcgaatctctccgag
gttttccatgaacttggctgctgtccccagcacgaccagctctggcactacctctcactg
gaggagcatctaaaaggctatgctttgataaacggagtaccgaagtcggacattgatcaa
gtcattgacttttatttggaaaatctacaaattgaagagcacaggaaaaaaacaacaaag
ggattatcagggggaacaaagagaaagttgagttatgccattagcatgattgggatgcct
aaagcggttttactcgatgagccatctacaggaatggatccagcttccaagagattcctt
tgggacacagtgattaagggcttcagtgggacaaaccgaggagcaatattgaccactcac
tcaatggaggaagcagacgcgctctgtacccgtgttggcatcatggtcgctggcaccctc
aagtgcctcggaccaacacaacacctgaagaccaagttcggtggtggctacaccttggag
gtaaagcttcgacagacgaaagaagatgacgcggacgacctgttggaagccctcaacgac
tacatcaaggaaatcttcccacaagttacgattcttgagcagtttggcgaccgtgtccag
tataaagtgccgtcggaagatgttaaggctctatcagttgtgttctcagctgtagaatca
gcaaaagatcgtctaaacatagaggagtacagttttagtcagtctacgctggaacaggtg
ttcatccagtttgccaaacaggagtacgaggccgtcgagtccgtacggaaagggagcatt
aatgtctaa
DBGET
integrated database retrieval system
