Lineus longissimus (bootlace worm): 135489300
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Entry
135489300 CDS
T09977
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llon04121
]
135489300
Enzymes [BR:
llon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135489300
Ubiquitin system [BR:
llon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135489300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_5
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_4
zf-UDP
FYVE
Prok-RING_4
zf-C3HC4_4
Zn_ribbon_6
DUF7569
Rtf2
TRAF3_RING
DUF1258
zf-P11
Motif
Other DBs
NCBI-GeneID:
135489300
NCBI-ProteinID:
XP_064630664
LinkDB
All DBs
Position
6:complement(1239390..1243652)
Genome browser
AA seq
228 aa
AA seq
DB search
MMYRRGGRTPLGNVRRPATRRRPRPSHPPAPAAPHGDSGSIIIIDDDDDDRTTIDLTSDD
TPQRKTYRNNGVIDLTSPNSHLPVVIGQPTPSRRSPRNRRNVARIISSDSDSDELPDLNH
SYNRSDSRAGSPDLSLVTPAEKPKVGDAASRSTRSRPEESPFDQMAICPICFDNYQAIRA
SHRKVYSTVCGHIFCNECIKVAIRSQHRCPTCRKKLTLSQTHPVFLGF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatcgtcgaggcggccgtactccactcggcaatgtgagacgcccagctacgaga
cgtaggcctaggcctagccaccctcctgctcctgctgctcctcatggcgatagtggcagt
attatcatcattgatgatgatgacgatgatcgcacgaccatcgacttgacatctgatgac
actcctcaaaggaaaacctacagaaacaatggggtgatcgacttaacaagtccaaactca
catttgccagtagttataggacaaccgactccatcacgcagatcgccaagaaatcgccga
aacgttgctcgcatcatcagctcagactctgacagtgacgagctccccgacttaaaccac
agctacaacagaagtgattcacgtgctggctcccctgatctttcacttgttacccctgct
gagaaaccaaaagtaggagacgcggcatcaagatccacaagaagtcgacctgaagagtca
ccatttgatcaaatggcaatctgccccatttgctttgacaactatcaagcgatccgagcg
agtcatcggaaggtctattcaacagtctgtggacacattttctgcaatgaatgtatcaag
gttgctatccgatctcaacacaggtgtccaacgtgtcgcaagaaattaaccctttctcaa
actcatccggtatttcttggattttaa
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